RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
CDK11B-201ENST00000340677 CARMIL2Q6F5E8 1435 aa23.55■■□□□ 1.36
CDK11B-201ENST00000340677 CCDC18Q5T9S5 1454 aa23.54■■□□□ 1.36
CDK11B-201ENST00000340677 BCANQ96GW7 911 aa23.52■■□□□ 1.36
CDK11B-201ENST00000340677 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
CDK11B-201ENST00000340677 SAMD1Q6SPF0 538 aaPredicted RBP23.5■■□□□ 1.35
CDK11B-201ENST00000340677 NBR1Q14596 966 aa23.5■■□□□ 1.35
CDK11B-201ENST00000340677 JPH4Q96JJ6 628 aa23.5■■□□□ 1.35
CDK11B-201ENST00000340677 ZNF316A6NFI3 1004 aaPredicted RBP23.49■■□□□ 1.35
CDK11B-201ENST00000340677 HAP1P54257 671 aaPredicted RBP23.48■■□□□ 1.35
CDK11B-201ENST00000340677 RAPGEF6Q8TEU7 1601 aa23.47■■□□□ 1.35
CDK11B-201ENST00000340677 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
CDK11B-201ENST00000340677 RRBP1Q9P2E9 1410 aaKnown RBP23.45■■□□□ 1.34
CDK11B-201ENST00000340677 NPM2Q86SE8 214 aaKnown RBP23.43■■□□□ 1.34
CDK11B-201ENST00000340677 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
CDK11B-201ENST00000340677 EPRSP07814 1512 aaKnown RBP23.41■■□□□ 1.34
CDK11B-201ENST00000340677 NAP1L5Q96NT1 182 aaPredicted RBP23.4■■□□□ 1.34
CDK11B-201ENST00000340677 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
CDK11B-201ENST00000340677 SUPT6HQ7KZ85 1726 aaKnown RBP23.37■■□□□ 1.33
CDK11B-201ENST00000340677 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
CDK11B-201ENST00000340677 ABCA8O94911 1581 aa23.36■■□□□ 1.33
CDK11B-201ENST00000340677 RIMBP3CA6NJZ7 1639 aa23.35■■□□□ 1.33
CDK11B-201ENST00000340677 RIMBP3BA6NNM3 1639 aa23.35■■□□□ 1.33
CDK11B-201ENST00000340677 RIMBP3Q9UFD9 1639 aa23.35■■□□□ 1.33
CDK11B-201ENST00000340677 NUP153P49790 1475 aaKnown RBP23.35■■□□□ 1.33
CDK11B-201ENST00000340677 ATP1B4Q9UN42 357 aaPredicted RBP23.34■■□□□ 1.33
CDK11B-201ENST00000340677 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
CDK11B-201ENST00000340677 MTUS2Q5JR59 1369 aa23.32■■□□□ 1.32
CDK11B-201ENST00000340677 ARHGEF11O15085 1522 aa23.31■■□□□ 1.32
CDK11B-201ENST00000340677 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
CDK11B-201ENST00000340677 ZNF326Q5BKZ1 582 aaKnown RBP23.3■■□□□ 1.32
CDK11B-201ENST00000340677 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
CDK11B-201ENST00000340677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.28■■□□□ 1.32
CDK11B-201ENST00000340677 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
CDK11B-201ENST00000340677 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
CDK11B-201ENST00000340677 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
CDK11B-201ENST00000340677 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
CDK11B-201ENST00000340677 NCOA2Q15596 1464 aa23.24■■□□□ 1.31
CDK11B-201ENST00000340677 PTPRGP23470 1445 aa23.24■■□□□ 1.31
CDK11B-201ENST00000340677 RTL5Q5HYW3 569 aaPredicted RBP23.24■■□□□ 1.31
CDK11B-201ENST00000340677 C14orf37Q86TY3 774 aa23.22■■□□□ 1.31
CDK11B-201ENST00000340677 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
CDK11B-201ENST00000340677 FKBP8Q14318 412 aa23.21■■□□□ 1.31
CDK11B-201ENST00000340677 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
CDK11B-201ENST00000340677 BBXQ8WY36 941 aaPredicted RBP23.18■■□□□ 1.3
CDK11B-201ENST00000340677 MYOM3Q5VTT5 1437 aa23.18■■□□□ 1.3
CDK11B-201ENST00000340677 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
CDK11B-201ENST00000340677 ERCC6L2Q5T890 1561 aa23.17■■□□□ 1.3
CDK11B-201ENST00000340677 ITGAEP38570 1179 aa23.16■■□□□ 1.3
CDK11B-201ENST00000340677 TROQ12816 1431 aaPredicted RBP23.15■■□□□ 1.3
CDK11B-201ENST00000340677 UACAQ9BZF9 1416 aa23.15■■□□□ 1.3
CDK11B-201ENST00000340677 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
CDK11B-201ENST00000340677 BRPF3Q9ULD4 1205 aa23.14■■□□□ 1.29
CDK11B-201ENST00000340677 ABCC2Q92887 1545 aa23.13■■□□□ 1.29
CDK11B-201ENST00000340677 UHRF1BP1LA0JNW5 1464 aa23.13■■□□□ 1.29
CDK11B-201ENST00000340677 ATP10BO94823 1461 aa23.12■■□□□ 1.29
CDK11B-201ENST00000340677 MIA2Q96PC5 1412 aa23.11■■□□□ 1.29
CDK11B-201ENST00000340677 TCOF1Q13428 1488 aaKnown RBP23.11■■□□□ 1.29
CDK11B-201ENST00000340677 GTF2E1P29083 439 aaPredicted RBP23.1■■□□□ 1.29
CDK11B-201ENST00000340677 HSP90AA2PQ14568 343 aaPredicted RBP23.1■■□□□ 1.29
CDK11B-201ENST00000340677 IPO4Q8TEX9 1081 aaKnown RBP23.1■■□□□ 1.29
CDK11B-201ENST00000340677 PTPN23Q9H3S7 1636 aa23.09■■□□□ 1.29
CDK11B-201ENST00000340677 ITSN2Q9NZM3 1697 aa23.09■■□□□ 1.29
CDK11B-201ENST00000340677 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.29
CDK11B-201ENST00000340677 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.28
CDK11B-201ENST00000340677 RRP9O43818 475 aaKnown RBP23.07■■□□□ 1.28
CDK11B-201ENST00000340677 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
CDK11B-201ENST00000340677 PAK3O75914 559 aaPredicted RBP23.05■■□□□ 1.28
CDK11B-201ENST00000340677 ZFP91Q96JP5 570 aaPredicted RBP23.05■■□□□ 1.28
CDK11B-201ENST00000340677 PRDM4Q9UKN5 801 aa23.05■■□□□ 1.28
CDK11B-201ENST00000340677 KIF14Q15058 1648 aa23.04■■□□□ 1.28
CDK11B-201ENST00000340677 CNKSR2Q8WXI2 1034 aa23.02■■□□□ 1.27
CDK11B-201ENST00000340677 WASHC2AQ641Q2 1341 aa23.01■■□□□ 1.27
CDK11B-201ENST00000340677 KDM5BQ9UGL1 1544 aa22.99■■□□□ 1.27
CDK11B-201ENST00000340677 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
CDK11B-201ENST00000340677 ABCC10Q5T3U5 1492 aa22.97■■□□□ 1.27
CDK11B-201ENST00000340677 ZCCHC11Q5TAX3 1644 aaKnown RBP22.97■■□□□ 1.27
CDK11B-201ENST00000340677 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
CDK11B-201ENST00000340677 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
CDK11B-201ENST00000340677 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
CDK11B-201ENST00000340677 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
CDK11B-201ENST00000340677 GPATCH8Q9UKJ3 1502 aaKnown RBP22.92■■□□□ 1.26
CDK11B-201ENST00000340677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.92■■□□□ 1.26
CDK11B-201ENST00000340677 RGS3P49796 1198 aa22.91■■□□□ 1.26
CDK11B-201ENST00000340677 CYB5RLQ6IPT4 315 aa22.9■■□□□ 1.26
CDK11B-201ENST00000340677 TAOK2Q9UL54 1235 aa22.9■■□□□ 1.26
CDK11B-201ENST00000340677 SETD5Q9C0A6 1442 aa22.9■■□□□ 1.26
CDK11B-201ENST00000340677 AKNAQ7Z591 1439 aa22.9■■□□□ 1.26
CDK11B-201ENST00000340677 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
CDK11B-201ENST00000340677 FAM43AQ8N2R8 423 aa22.89■■□□□ 1.25
CDK11B-201ENST00000340677 FOXD1Q16676 465 aa22.88■■□□□ 1.25
CDK11B-201ENST00000340677 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
CDK11B-201ENST00000340677 PREX2Q70Z35 1606 aa22.87■■□□□ 1.25
CDK11B-201ENST00000340677 SECISBP2LQ93073 1101 aaKnown RBP22.86■■□□□ 1.25
CDK11B-201ENST00000340677 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
CDK11B-201ENST00000340677 BCCIPQ9P287 314 aaKnown RBP eCLIP22.85■■□□□ 1.25
CDK11B-201ENST00000340677 HFM1A2PYH4 1435 aa22.85■■□□□ 1.25
CDK11B-201ENST00000340677 PTPRKQ15262 1439 aa22.83■■□□□ 1.25
CDK11B-201ENST00000340677 AMER1Q5JTC6 1135 aaPredicted RBP22.83■■□□□ 1.25
CDK11B-201ENST00000340677 CALD1Q05682 793 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms