RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 SCRIBQ14160 1630 aa15.96■□□□□ 0.14
BRPF3-201ENST00000339717 CWC15Q9P013 229 aaKnown RBP15.94■□□□□ 0.14
BRPF3-201ENST00000339717 HMGN5P82970 282 aaKnown RBP15.94■□□□□ 0.14
BRPF3-201ENST00000339717 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
BRPF3-201ENST00000339717 ESPNB1AK53 854 aa15.93■□□□□ 0.14
BRPF3-201ENST00000339717 SYAP1Q96A49 352 aaPredicted RBP15.92■□□□□ 0.14
BRPF3-201ENST00000339717 DNAJC2Q99543 621 aaKnown RBP15.92■□□□□ 0.14
BRPF3-201ENST00000339717 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
BRPF3-201ENST00000339717 CLGNO14967 610 aa15.9■□□□□ 0.14
BRPF3-201ENST00000339717 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
BRPF3-201ENST00000339717 AXDND1Q5T1B0 1012 aaPredicted RBP15.9■□□□□ 0.14
BRPF3-201ENST00000339717 IPO4Q8TEX9 1081 aaKnown RBP15.89■□□□□ 0.14
BRPF3-201ENST00000339717 LETM1O95202 739 aaPredicted RBP15.89■□□□□ 0.13
BRPF3-201ENST00000339717 SMAP1Q8IYB5 467 aaPredicted RBP15.89■□□□□ 0.13
BRPF3-201ENST00000339717 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
BRPF3-201ENST00000339717 HIRIP3Q9BW71 556 aaPredicted RBP15.88■□□□□ 0.13
BRPF3-201ENST00000339717 DIAPH3Q9NSV4 1193 aa15.88■□□□□ 0.13
BRPF3-201ENST00000339717 NUDCQ9Y266 331 aa15.87■□□□□ 0.13
BRPF3-201ENST00000339717 CLCN1P35523 988 aa15.87■□□□□ 0.13
BRPF3-201ENST00000339717 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
BRPF3-201ENST00000339717 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
BRPF3-201ENST00000339717 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
BRPF3-201ENST00000339717 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
BRPF3-201ENST00000339717 CCDC173Q0VFZ6 552 aa15.85■□□□□ 0.13
BRPF3-201ENST00000339717 ZBTB7CA1YPR0 619 aa15.85■□□□□ 0.13
BRPF3-201ENST00000339717 GTPBP4Q9BZE4 634 aaKnown RBP15.84■□□□□ 0.13
BRPF3-201ENST00000339717 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
BRPF3-201ENST00000339717 CALCOCO1Q9P1Z2 691 aa15.84■□□□□ 0.13
BRPF3-201ENST00000339717 UQCRHLA0A096LP55 91 aa15.84■□□□□ 0.13
BRPF3-201ENST00000339717 UQCRHP07919 91 aa15.84■□□□□ 0.13
BRPF3-201ENST00000339717 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
BRPF3-201ENST00000339717 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
BRPF3-201ENST00000339717 DRC7Q8IY82 874 aa15.84■□□□□ 0.13
BRPF3-201ENST00000339717 KIF3AQ9Y496 699 aa15.83■□□□□ 0.13
BRPF3-201ENST00000339717 DEF6Q9H4E7 631 aa15.83■□□□□ 0.12
BRPF3-201ENST00000339717 CGNQ9P2M7 1197 aaKnown RBP15.83■□□□□ 0.12
BRPF3-201ENST00000339717 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.12
BRPF3-201ENST00000339717 ZRSR1Q15695 479 aaKnown RBP15.81■□□□□ 0.12
BRPF3-201ENST00000339717 PLCD3Q8N3E9 789 aa15.81■□□□□ 0.12
BRPF3-201ENST00000339717 CCDC39Q9UFE4 941 aa15.81■□□□□ 0.12
BRPF3-201ENST00000339717 PHF14O94880 888 aa15.8■□□□□ 0.12
BRPF3-201ENST00000339717 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
BRPF3-201ENST00000339717 CCDC9Q9Y3X0 531 aaKnown RBP15.8■□□□□ 0.12
BRPF3-201ENST00000339717 FRAT2O75474 233 aaPredicted RBP15.79■□□□□ 0.12
BRPF3-201ENST00000339717 KLHL34Q8N239 644 aa15.79■□□□□ 0.12
BRPF3-201ENST00000339717 KIF20AO95235 890 aa15.79■□□□□ 0.12
BRPF3-201ENST00000339717 CHMP5Q9NZZ3 219 aa15.78■□□□□ 0.12
BRPF3-201ENST00000339717 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
BRPF3-201ENST00000339717 WASHC2CQ9Y4E1 1318 aa15.78■□□□□ 0.12
BRPF3-201ENST00000339717 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
BRPF3-201ENST00000339717 RCAN3Q9UKA8 241 aa15.77■□□□□ 0.12
BRPF3-201ENST00000339717 NACADO15069 1562 aa15.77■□□□□ 0.12
BRPF3-201ENST00000339717 PDCL2Q8N4E4 241 aa15.77■□□□□ 0.12
BRPF3-201ENST00000339717 WASHC2AQ641Q2 1341 aa15.77■□□□□ 0.11
BRPF3-201ENST00000339717 CASC1Q6TDU7 716 aa15.77■□□□□ 0.11
BRPF3-201ENST00000339717 NASPP49321 788 aaPredicted RBP15.76■□□□□ 0.11
BRPF3-201ENST00000339717 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
BRPF3-201ENST00000339717 ZSCAN30Q86W11 494 aa15.75■□□□□ 0.11
BRPF3-201ENST00000339717 WWC1Q8IX03 1113 aa15.75■□□□□ 0.11
BRPF3-201ENST00000339717 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
BRPF3-201ENST00000339717 DDX49Q9Y6V7 483 aaKnown RBP15.74■□□□□ 0.11
BRPF3-201ENST00000339717 TIGD1Q96MW7 591 aa15.74■□□□□ 0.11
BRPF3-201ENST00000339717 E9PSI1 815 aa15.74■□□□□ 0.11
BRPF3-201ENST00000339717 DYNC1I1O14576 645 aa15.74■□□□□ 0.11
BRPF3-201ENST00000339717 USP8P40818 1118 aa15.74■□□□□ 0.11
BRPF3-201ENST00000339717 CHMP4AQ9BY43 222 aa15.74■□□□□ 0.11
BRPF3-201ENST00000339717 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
BRPF3-201ENST00000339717 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
BRPF3-201ENST00000339717 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
BRPF3-201ENST00000339717 FBLN2P98095 1184 aa15.72■□□□□ 0.11
BRPF3-201ENST00000339717 GRPEL1Q9HAV7 217 aa15.72■□□□□ 0.11
BRPF3-201ENST00000339717 KCNJ4P48050 445 aa15.71■□□□□ 0.11
BRPF3-201ENST00000339717 CENPQQ7L2Z9 268 aaPredicted RBP15.71■□□□□ 0.11
BRPF3-201ENST00000339717 RDXP35241 583 aaKnown RBP15.71■□□□□ 0.1
BRPF3-201ENST00000339717 TRAK2O60296 914 aa15.7■□□□□ 0.1
BRPF3-201ENST00000339717 ARGLU1Q9NWB6 273 aaPredicted RBP15.7■□□□□ 0.1
BRPF3-201ENST00000339717 FAM193AP78312 1265 aa15.69■□□□□ 0.1
BRPF3-201ENST00000339717 SASS6Q6UVJ0 657 aa15.69■□□□□ 0.1
BRPF3-201ENST00000339717 CTR9Q6PD62 1173 aa15.69■□□□□ 0.1
BRPF3-201ENST00000339717 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
BRPF3-201ENST00000339717 P3H3Q8IVL6 736 aa15.68■□□□□ 0.1
BRPF3-201ENST00000339717 CBX1P83916 185 aa15.67■□□□□ 0.1
BRPF3-201ENST00000339717 GTF2A1P52655 376 aaPredicted RBP15.67■□□□□ 0.1
BRPF3-201ENST00000339717 TPM3P06753 285 aa15.67■□□□□ 0.1
BRPF3-201ENST00000339717 NBPF1Q3BBV0 1214 aa15.65■□□□□ 0.1
BRPF3-201ENST00000339717 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
BRPF3-201ENST00000339717 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.1
BRPF3-201ENST00000339717 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
BRPF3-201ENST00000339717 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
BRPF3-201ENST00000339717 BACH2Q9BYV9 841 aa15.64■□□□□ 0.09
BRPF3-201ENST00000339717 AK7Q96M32 723 aa15.63■□□□□ 0.09
BRPF3-201ENST00000339717 CCDC94Q9BW85 323 aaPredicted RBP15.63■□□□□ 0.09
BRPF3-201ENST00000339717 RBM28Q9NW13 759 aaKnown RBP15.63■□□□□ 0.09
BRPF3-201ENST00000339717 GOLGA6L4A6NEF3 574 aa15.63■□□□□ 0.09
BRPF3-201ENST00000339717 LEKR1Q6ZMV7 388 aa15.62■□□□□ 0.09
BRPF3-201ENST00000339717 KIF16BQ96L93 1317 aa15.62■□□□□ 0.09
BRPF3-201ENST00000339717 DHX37Q8IY37 1157 aaKnown RBP15.61■□□□□ 0.09
BRPF3-201ENST00000339717 GPATCH11Q8N954 259 aa15.61■□□□□ 0.09
BRPF3-201ENST00000339717 PLCD4Q9BRC7 762 aa15.6■□□□□ 0.09
BRPF3-201ENST00000339717 CENPJQ9HC77 1338 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms