RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
RBM39-202ENST00000338163 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
RBM39-202ENST00000338163 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
RBM39-202ENST00000338163 DEKP35659 375 aaKnown RBP16.3■□□□□ 0.2
RBM39-202ENST00000338163 NBR1Q14596 966 aa16.3■□□□□ 0.2
RBM39-202ENST00000338163 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
RBM39-202ENST00000338163 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
RBM39-202ENST00000338163 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
RBM39-202ENST00000338163 ATP10BO94823 1461 aa16.27■□□□□ 0.2
RBM39-202ENST00000338163 ABCC2Q92887 1545 aa16.27■□□□□ 0.19
RBM39-202ENST00000338163 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
RBM39-202ENST00000338163 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
RBM39-202ENST00000338163 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
RBM39-202ENST00000338163 PLEKHD1A6NEE1 506 aa16.25■□□□□ 0.19
RBM39-202ENST00000338163 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
RBM39-202ENST00000338163 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
RBM39-202ENST00000338163 DNAJC5Q9H3Z4 198 aa16.23■□□□□ 0.19
RBM39-202ENST00000338163 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
RBM39-202ENST00000338163 WASHC2AQ641Q2 1341 aa16.22■□□□□ 0.19
RBM39-202ENST00000338163 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
RBM39-202ENST00000338163 HSPA5P11021 654 aaKnown RBP16.22■□□□□ 0.19
RBM39-202ENST00000338163 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
RBM39-202ENST00000338163 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
RBM39-202ENST00000338163 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
RBM39-202ENST00000338163 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
RBM39-202ENST00000338163 MAGI3Q5TCQ9 1506 aa16.2■□□□□ 0.18
RBM39-202ENST00000338163 NOP58Q9Y2X3 529 aaKnown RBP16.19■□□□□ 0.18
RBM39-202ENST00000338163 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
RBM39-202ENST00000338163 ERICH6BQ5W0A0 696 aa16.18■□□□□ 0.18
RBM39-202ENST00000338163 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
RBM39-202ENST00000338163 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
RBM39-202ENST00000338163 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
RBM39-202ENST00000338163 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
RBM39-202ENST00000338163 TROQ12816 1431 aaPredicted RBP16.15■□□□□ 0.18
RBM39-202ENST00000338163 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
RBM39-202ENST00000338163 ZCCHC11Q5TAX3 1644 aaKnown RBP16.14■□□□□ 0.17
RBM39-202ENST00000338163 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
RBM39-202ENST00000338163 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
RBM39-202ENST00000338163 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
RBM39-202ENST00000338163 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
RBM39-202ENST00000338163 PTPRKQ15262 1439 aa16.12■□□□□ 0.17
RBM39-202ENST00000338163 NCOA2Q15596 1464 aa16.12■□□□□ 0.17
RBM39-202ENST00000338163 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
RBM39-202ENST00000338163 PRKRIP1Q9H875 184 aaPredicted RBP16.11■□□□□ 0.17
RBM39-202ENST00000338163 HFM1A2PYH4 1435 aa16.1■□□□□ 0.17
RBM39-202ENST00000338163 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
RBM39-202ENST00000338163 ZBED9Q6R2W3 1325 aa16.09■□□□□ 0.17
RBM39-202ENST00000338163 ANP32AP39687 249 aaKnown RBP16.09■□□□□ 0.17
RBM39-202ENST00000338163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
RBM39-202ENST00000338163 CNTLNQ9NXG0 1405 aa16.08■□□□□ 0.16
RBM39-202ENST00000338163 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
RBM39-202ENST00000338163 CCDC136Q96JN2 1154 aa16.08■□□□□ 0.16
RBM39-202ENST00000338163 WDR7Q9Y4E6 1490 aa16.07■□□□□ 0.16
RBM39-202ENST00000338163 NAIPQ13075 1403 aa16.07■□□□□ 0.16
RBM39-202ENST00000338163 KIF14Q15058 1648 aa16.06■□□□□ 0.16
RBM39-202ENST00000338163 FOXD1Q16676 465 aa16.06■□□□□ 0.16
RBM39-202ENST00000338163 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
RBM39-202ENST00000338163 SUPT6HQ7KZ85 1726 aaKnown RBP16.06■□□□□ 0.16
RBM39-202ENST00000338163 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
RBM39-202ENST00000338163 PTPN23Q9H3S7 1636 aa16.05■□□□□ 0.16
RBM39-202ENST00000338163 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
RBM39-202ENST00000338163 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
RBM39-202ENST00000338163 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
RBM39-202ENST00000338163 MYOM3Q5VTT5 1437 aa16.03■□□□□ 0.16
RBM39-202ENST00000338163 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
RBM39-202ENST00000338163 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
RBM39-202ENST00000338163 ZNF644Q9H582 1327 aaPredicted RBP16.01■□□□□ 0.15
RBM39-202ENST00000338163 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
RBM39-202ENST00000338163 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
RBM39-202ENST00000338163 FAM69CQ0P6D2 419 aa16■□□□□ 0.15
RBM39-202ENST00000338163 ABCC10Q5T3U5 1492 aa15.99■□□□□ 0.15
RBM39-202ENST00000338163 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
RBM39-202ENST00000338163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.15
RBM39-202ENST00000338163 ANO8Q9HCE9 1232 aaPredicted RBP15.98■□□□□ 0.15
RBM39-202ENST00000338163 TTC37Q6PGP7 1564 aa15.97■□□□□ 0.15
RBM39-202ENST00000338163 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
RBM39-202ENST00000338163 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
RBM39-202ENST00000338163 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
RBM39-202ENST00000338163 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
RBM39-202ENST00000338163 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
RBM39-202ENST00000338163 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
RBM39-202ENST00000338163 MIA2Q96PC5 1412 aa15.93■□□□□ 0.14
RBM39-202ENST00000338163 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
RBM39-202ENST00000338163 NBPF8Q3BBV2 869 aa15.92■□□□□ 0.14
RBM39-202ENST00000338163 ZNF326Q5BKZ1 582 aaKnown RBP15.92■□□□□ 0.14
RBM39-202ENST00000338163 EFCAB2Q5VUJ9 269 aa15.92■□□□□ 0.14
RBM39-202ENST00000338163 ARHGAP5Q13017 1502 aa15.92■□□□□ 0.14
RBM39-202ENST00000338163 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
RBM39-202ENST00000338163 PLCH2O75038 1416 aa15.92■□□□□ 0.14
RBM39-202ENST00000338163 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.14
RBM39-202ENST00000338163 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
RBM39-202ENST00000338163 SALL2Q9Y467 1007 aaPredicted RBP15.9■□□□□ 0.14
RBM39-202ENST00000338163 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
RBM39-202ENST00000338163 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
RBM39-202ENST00000338163 DENND4BO75064 1496 aaPredicted RBP15.88■□□□□ 0.13
RBM39-202ENST00000338163 ABCA9Q8IUA7 1624 aa15.88■□□□□ 0.13
RBM39-202ENST00000338163 CAMSAP2Q08AD1 1489 aa15.87■□□□□ 0.13
RBM39-202ENST00000338163 ITSN2Q9NZM3 1697 aa15.87■□□□□ 0.13
RBM39-202ENST00000338163 FANCAO15360 1455 aa15.86■□□□□ 0.13
RBM39-202ENST00000338163 NEFMP07197 916 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms