RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 GOLGA6L4A6NEF3 574 aa10.21□□□□□ -0.77
TNPO1-201ENST00000337273 GBP4Q96PP9 640 aa10.21□□□□□ -0.77
TNPO1-201ENST00000337273 NOL8Q76FK4 1167 aaKnown RBP10.21□□□□□ -0.78
TNPO1-201ENST00000337273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.21□□□□□ -0.78
TNPO1-201ENST00000337273 CFDP1Q9UEE9 299 aaPredicted RBP10.21□□□□□ -0.78
TNPO1-201ENST00000337273 TCERG1O14776 1098 aaKnown RBP10.2□□□□□ -0.78
TNPO1-201ENST00000337273 PPP1R15AO75807 674 aaPredicted RBP10.2□□□□□ -0.78
TNPO1-201ENST00000337273 SYAP1Q96A49 352 aaPredicted RBP10.2□□□□□ -0.78
TNPO1-201ENST00000337273 FOXD1Q16676 465 aa10.2□□□□□ -0.78
TNPO1-201ENST00000337273 USP35Q9P2H5 1018 aa10.2□□□□□ -0.78
TNPO1-201ENST00000337273 CCNB3Q8WWL7 1395 aa10.2□□□□□ -0.78
TNPO1-201ENST00000337273 HTATSF1O43719 755 aaKnown RBP10.19□□□□□ -0.78
TNPO1-201ENST00000337273 CHMP4AQ9BY43 222 aa10.19□□□□□ -0.78
TNPO1-201ENST00000337273 FRAT1Q92837 279 aaPredicted RBP10.19□□□□□ -0.78
TNPO1-201ENST00000337273 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
TNPO1-201ENST00000337273 KIAA2012Q0VF49 1180 aa10.17□□□□□ -0.78
TNPO1-201ENST00000337273 CALD1Q05682 793 aaKnown RBP10.17□□□□□ -0.78
TNPO1-201ENST00000337273 NACADO15069 1562 aa10.16□□□□□ -0.78
TNPO1-201ENST00000337273 FGD1P98174 961 aa10.16□□□□□ -0.78
TNPO1-201ENST00000337273 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
TNPO1-201ENST00000337273 FOXD4L6Q3SYB3 417 aaPredicted RBP10.15□□□□□ -0.78
TNPO1-201ENST00000337273 FOXD4L3Q6VB84 417 aaPredicted RBP10.15□□□□□ -0.78
TNPO1-201ENST00000337273 KCNJ4P48050 445 aa10.15□□□□□ -0.78
TNPO1-201ENST00000337273 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
TNPO1-201ENST00000337273 PMFBP1Q8TBY8 1022 aa10.14□□□□□ -0.79
TNPO1-201ENST00000337273 RALBP1Q15311 655 aa10.14□□□□□ -0.79
TNPO1-201ENST00000337273 RGL3Q3MIN7 710 aa10.14□□□□□ -0.79
TNPO1-201ENST00000337273 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
TNPO1-201ENST00000337273 KANK1Q14678 1352 aa10.14□□□□□ -0.79
TNPO1-201ENST00000337273 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
TNPO1-201ENST00000337273 KTN1Q86UP2 1357 aaKnown RBP10.13□□□□□ -0.79
TNPO1-201ENST00000337273 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
TNPO1-201ENST00000337273 DRC7Q8IY82 874 aa10.13□□□□□ -0.79
TNPO1-201ENST00000337273 PHLDB1Q86UU1 1377 aa10.13□□□□□ -0.79
TNPO1-201ENST00000337273 TPM4P67936 248 aa10.13□□□□□ -0.79
TNPO1-201ENST00000337273 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
TNPO1-201ENST00000337273 MPNDQ8N594 471 aa10.12□□□□□ -0.79
TNPO1-201ENST00000337273 CCDC34Q96HJ3 373 aa10.12□□□□□ -0.79
TNPO1-201ENST00000337273 BAZ1AQ9NRL2 1556 aaPredicted RBP10.12□□□□□ -0.79
TNPO1-201ENST00000337273 NAP1L2Q9ULW6 460 aaPredicted RBP10.12□□□□□ -0.79
TNPO1-201ENST00000337273 HDAC5Q9UQL6 1122 aa10.12□□□□□ -0.79
TNPO1-201ENST00000337273 PLIN1O60240 522 aa10.11□□□□□ -0.79
TNPO1-201ENST00000337273 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
TNPO1-201ENST00000337273 IPO9Q96P70 1041 aaKnown RBP10.1□□□□□ -0.79
TNPO1-201ENST00000337273 PHF14O94880 888 aa10.1□□□□□ -0.79
TNPO1-201ENST00000337273 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
TNPO1-201ENST00000337273 POGKQ9P215 609 aa10.1□□□□□ -0.79
TNPO1-201ENST00000337273 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
TNPO1-201ENST00000337273 GOLGA6L3A6NEY3 463 aa10.1□□□□□ -0.79
TNPO1-201ENST00000337273 ROCK2O75116 1388 aaKnown RBP10.1□□□□□ -0.79
TNPO1-201ENST00000337273 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
TNPO1-201ENST00000337273 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
TNPO1-201ENST00000337273 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
TNPO1-201ENST00000337273 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
TNPO1-201ENST00000337273 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
TNPO1-201ENST00000337273 CHMP4CQ96CF2 233 aa10.07□□□□□ -0.8
TNPO1-201ENST00000337273 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
TNPO1-201ENST00000337273 PKNOX2Q96KN3 472 aa10.07□□□□□ -0.8
TNPO1-201ENST00000337273 EIF3AQ14152 1382 aaKnown RBP10.06□□□□□ -0.8
TNPO1-201ENST00000337273 U2SURPO15042 1029 aaKnown RBP10.06□□□□□ -0.8
TNPO1-201ENST00000337273 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
TNPO1-201ENST00000337273 GOLGA6L1Q8N7Z2 621 aa10.06□□□□□ -0.8
TNPO1-201ENST00000337273 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
TNPO1-201ENST00000337273 SKOR2Q2VWA4 1001 aaPredicted RBP10.05□□□□□ -0.8
TNPO1-201ENST00000337273 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
TNPO1-201ENST00000337273 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
TNPO1-201ENST00000337273 TNNT3P45378 269 aaPredicted RBP10.05□□□□□ -0.8
TNPO1-201ENST00000337273 SOX12O15370 315 aa10.04□□□□□ -0.8
TNPO1-201ENST00000337273 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
TNPO1-201ENST00000337273 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
TNPO1-201ENST00000337273 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
TNPO1-201ENST00000337273 RTF1Q92541 710 aaKnown RBP10.04□□□□□ -0.8
TNPO1-201ENST00000337273 RBM10P98175 930 aaKnown RBP10.04□□□□□ -0.8
TNPO1-201ENST00000337273 MORC1Q86VD1 984 aa10.04□□□□□ -0.8
TNPO1-201ENST00000337273 GNL2Q13823 731 aaKnown RBP10.04□□□□□ -0.8
TNPO1-201ENST00000337273 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
TNPO1-201ENST00000337273 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
TNPO1-201ENST00000337273 PATL2C9JE40 543 aaKnown RBP10.03□□□□□ -0.8
TNPO1-201ENST00000337273 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
TNPO1-201ENST00000337273 HMMRO75330 724 aa10.02□□□□□ -0.81
TNPO1-201ENST00000337273 HSPA5P11021 654 aaKnown RBP10.02□□□□□ -0.81
TNPO1-201ENST00000337273 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
TNPO1-201ENST00000337273 HDGFL2Q7Z4V5 671 aaPredicted RBP10.01□□□□□ -0.81
TNPO1-201ENST00000337273 HSP90AA2PQ14568 343 aaPredicted RBP10.01□□□□□ -0.81
TNPO1-201ENST00000337273 GPATCH3Q96I76 525 aa10.01□□□□□ -0.81
TNPO1-201ENST00000337273 SAFB2Q14151 953 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNPO1-201ENST00000337273 ST18O60284 1047 aa10□□□□□ -0.81
TNPO1-201ENST00000337273 FOSBP53539 338 aa10□□□□□ -0.81
TNPO1-201ENST00000337273 CCDC9Q9Y3X0 531 aaKnown RBP10□□□□□ -0.81
TNPO1-201ENST00000337273 ATP6V1DQ9Y5K8 247 aa10□□□□□ -0.81
TNPO1-201ENST00000337273 NGEFQ8N5V2 710 aa9.99□□□□□ -0.81
TNPO1-201ENST00000337273 FAM13BQ9NYF5 915 aa9.99□□□□□ -0.81
TNPO1-201ENST00000337273 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
TNPO1-201ENST00000337273 LMOD3Q0VAK6 560 aa9.98□□□□□ -0.81
TNPO1-201ENST00000337273 CENPQQ7L2Z9 268 aaPredicted RBP9.98□□□□□ -0.81
TNPO1-201ENST00000337273 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
TNPO1-201ENST00000337273 NLRP13Q86W25 1043 aa9.98□□□□□ -0.81
TNPO1-201ENST00000337273 SETQ01105 290 aaPredicted RBP9.98□□□□□ -0.81
TNPO1-201ENST00000337273 GPS2Q13227 327 aa9.97□□□□□ -0.81
TNPO1-201ENST00000337273 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms