RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 CDC42BPAQ5VT25 1732 aa11.03□□□□□ -0.64
ATF3-201ENST00000336937 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
ATF3-201ENST00000336937 AKNAQ7Z591 1439 aa11.02□□□□□ -0.64
ATF3-201ENST00000336937 ADGRL1O94910 1474 aa11.02□□□□□ -0.65
ATF3-201ENST00000336937 ZNF518AQ6AHZ1 1483 aa11.02□□□□□ -0.65
ATF3-201ENST00000336937 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
ATF3-201ENST00000336937 CDC42BPBQ9Y5S2 1711 aa11.02□□□□□ -0.65
ATF3-201ENST00000336937 FRMPD1Q5SYB0 1578 aa11.02□□□□□ -0.65
ATF3-201ENST00000336937 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
ATF3-201ENST00000336937 ABCC1P33527 1531 aa11□□□□□ -0.65
ATF3-201ENST00000336937 KDM5CP41229 1560 aa11□□□□□ -0.65
ATF3-201ENST00000336937 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
ATF3-201ENST00000336937 EFCAB2Q5VUJ9 269 aa10.99□□□□□ -0.65
ATF3-201ENST00000336937 HECW2Q9P2P5 1572 aa10.98□□□□□ -0.65
ATF3-201ENST00000336937 ZFYVE16Q7Z3T8 1539 aa10.97□□□□□ -0.65
ATF3-201ENST00000336937 REREQ9P2R6 1566 aa10.96□□□□□ -0.65
ATF3-201ENST00000336937 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.65
ATF3-201ENST00000336937 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
ATF3-201ENST00000336937 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
ATF3-201ENST00000336937 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
ATF3-201ENST00000336937 SCAPERQ9BY12 1400 aa10.94□□□□□ -0.66
ATF3-201ENST00000336937 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
ATF3-201ENST00000336937 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
ATF3-201ENST00000336937 APLP2Q06481 763 aa10.93□□□□□ -0.66
ATF3-201ENST00000336937 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
ATF3-201ENST00000336937 LOC105371045A0A1W2PR82 267 aa10.92□□□□□ -0.66
ATF3-201ENST00000336937 SYCP2Q9BX26 1530 aa10.91□□□□□ -0.66
ATF3-201ENST00000336937 C9orf84Q5VXU9 1444 aa10.91□□□□□ -0.66
ATF3-201ENST00000336937 MIA2Q96PC5 1412 aa10.91□□□□□ -0.66
ATF3-201ENST00000336937 BCORL1Q5H9F3 1711 aa10.9□□□□□ -0.66
ATF3-201ENST00000336937 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.67
ATF3-201ENST00000336937 RSPH4AQ5TD94 716 aa10.89□□□□□ -0.67
ATF3-201ENST00000336937 CFDP1Q9UEE9 299 aaPredicted RBP10.89□□□□□ -0.67
ATF3-201ENST00000336937 ARHGEF5Q12774 1597 aa10.89□□□□□ -0.67
ATF3-201ENST00000336937 DIP2CQ9Y2E4 1556 aa10.88□□□□□ -0.67
ATF3-201ENST00000336937 ADGBQ8N7X0 1667 aa10.88□□□□□ -0.67
ATF3-201ENST00000336937 AGLP35573 1532 aa10.88□□□□□ -0.67
ATF3-201ENST00000336937 ATP10AO60312 1499 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 MYOM3Q5VTT5 1437 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 RAPGEF3O95398 923 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 ADAMTSL3P82987 1691 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 ATP7AQ04656 1500 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 ABCA6Q8N139 1617 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 CAMSAP2Q08AD1 1489 aa10.87□□□□□ -0.67
ATF3-201ENST00000336937 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
ATF3-201ENST00000336937 KIDINS220Q9ULH0 1771 aa10.86□□□□□ -0.67
ATF3-201ENST00000336937 FAM135AQ9P2D6 1515 aa10.86□□□□□ -0.67
ATF3-201ENST00000336937 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
ATF3-201ENST00000336937 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
ATF3-201ENST00000336937 PLXNC1O60486 1568 aa10.84□□□□□ -0.67
ATF3-201ENST00000336937 FER1L4A9Z1Z3 1794 aa10.84□□□□□ -0.67
ATF3-201ENST00000336937 ARHGEF12Q9NZN5 1544 aa10.84□□□□□ -0.67
ATF3-201ENST00000336937 MBD5Q9P267 1494 aa10.83□□□□□ -0.68
ATF3-201ENST00000336937 SHANK2Q9UPX8 1470 aa10.83□□□□□ -0.68
ATF3-201ENST00000336937 YEATS2Q9ULM3 1422 aa10.83□□□□□ -0.68
ATF3-201ENST00000336937 TRAPPC8Q9Y2L5 1435 aa10.83□□□□□ -0.68
ATF3-201ENST00000336937 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
ATF3-201ENST00000336937 PTPN23Q9H3S7 1636 aa10.81□□□□□ -0.68
ATF3-201ENST00000336937 SPAG9O60271 1321 aaKnown RBP10.81□□□□□ -0.68
ATF3-201ENST00000336937 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
ATF3-201ENST00000336937 MADDQ8WXG6 1647 aa10.8□□□□□ -0.68
ATF3-201ENST00000336937 EIF2AK4Q9P2K8 1649 aaKnown RBP10.8□□□□□ -0.68
ATF3-201ENST00000336937 MROH2AA6NES4 1674 aa10.8□□□□□ -0.68
ATF3-201ENST00000336937 CNTLNQ9NXG0 1405 aa10.8□□□□□ -0.68
ATF3-201ENST00000336937 FGD6Q6ZV73 1430 aa10.79□□□□□ -0.68
ATF3-201ENST00000336937 ZNF777Q9ULD5 760 aaPredicted RBP10.79□□□□□ -0.68
ATF3-201ENST00000336937 DNMT1P26358 1616 aaKnown RBP10.79□□□□□ -0.68
ATF3-201ENST00000336937 A2MP01023 1474 aa10.79□□□□□ -0.68
ATF3-201ENST00000336937 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
ATF3-201ENST00000336937 AFAP1Q8N556 730 aa10.78□□□□□ -0.68
ATF3-201ENST00000336937 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
ATF3-201ENST00000336937 RIMS1Q86UR5 1692 aaKnown RBP10.78□□□□□ -0.68
ATF3-201ENST00000336937 ARID4BQ4LE39 1312 aaPredicted RBP10.78□□□□□ -0.68
ATF3-201ENST00000336937 SIGLEC1Q9BZZ2 1709 aa10.78□□□□□ -0.68
ATF3-201ENST00000336937 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.69
ATF3-201ENST00000336937 PTPRMP28827 1452 aa10.77□□□□□ -0.69
ATF3-201ENST00000336937 TSPY4P0CV99 314 aa10.76□□□□□ -0.69
ATF3-201ENST00000336937 TSPY10P0CW01 314 aa10.76□□□□□ -0.69
ATF3-201ENST00000336937 PPP6R1Q9UPN7 881 aa10.76□□□□□ -0.69
ATF3-201ENST00000336937 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
ATF3-201ENST00000336937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
ATF3-201ENST00000336937 DUOX2Q9NRD8 1548 aa10.74□□□□□ -0.69
ATF3-201ENST00000336937 HNRNPMP52272 730 aaKnown RBP eCLIP10.74□□□□□ -0.69
ATF3-201ENST00000336937 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
ATF3-201ENST00000336937 ERBINQ96RT1 1412 aa10.73□□□□□ -0.69
ATF3-201ENST00000336937 KDM5DQ9BY66 1539 aa10.73□□□□□ -0.69
ATF3-201ENST00000336937 PREX1Q8TCU6 1659 aa10.73□□□□□ -0.69
ATF3-201ENST00000336937 DHX29Q7Z478 1369 aaKnown RBP10.72□□□□□ -0.69
ATF3-201ENST00000336937 DAPK1P53355 1430 aa10.72□□□□□ -0.69
ATF3-201ENST00000336937 ADGRL2O95490 1459 aa10.72□□□□□ -0.69
ATF3-201ENST00000336937 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.69
ATF3-201ENST00000336937 C3P01024 1663 aa10.7□□□□□ -0.7
ATF3-201ENST00000336937 NPATQ14207 1427 aa10.7□□□□□ -0.7
ATF3-201ENST00000336937 SETD1BQ9UPS6 1966 aaKnown RBP10.7□□□□□ -0.7
ATF3-201ENST00000336937 PRDM15P57071 1507 aaPredicted RBP10.69□□□□□ -0.7
ATF3-201ENST00000336937 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
ATF3-201ENST00000336937 DEPDC5O75140 1603 aa10.69□□□□□ -0.7
ATF3-201ENST00000336937 ANKRD30AQ9BXX3 1397 aa10.68□□□□□ -0.7
ATF3-201ENST00000336937 ABCC5O15440 1437 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms