RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 GPATCH3Q96I76 525 aa15.62■□□□□ 0.09
FN1-202ENST00000336916 KTN1Q86UP2 1357 aaKnown RBP15.61■□□□□ 0.09
FN1-202ENST00000336916 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
FN1-202ENST00000336916 GOLGA6L4A6NEF3 574 aa15.6■□□□□ 0.09
FN1-202ENST00000336916 U2SURPO15042 1029 aaKnown RBP15.6■□□□□ 0.09
FN1-202ENST00000336916 PHLDB1Q86UU1 1377 aa15.6■□□□□ 0.09
FN1-202ENST00000336916 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
FN1-202ENST00000336916 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
FN1-202ENST00000336916 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
FN1-202ENST00000336916 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.09
FN1-202ENST00000336916 KIAA1211Q6ZU35 1233 aa15.58■□□□□ 0.09
FN1-202ENST00000336916 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.09
FN1-202ENST00000336916 DNTTIP2Q5QJE6 756 aaKnown RBP15.58■□□□□ 0.08
FN1-202ENST00000336916 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
FN1-202ENST00000336916 ROCK2O75116 1388 aaKnown RBP15.57■□□□□ 0.08
FN1-202ENST00000336916 NBR1Q14596 966 aa15.57■□□□□ 0.08
FN1-202ENST00000336916 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
FN1-202ENST00000336916 KIAA2012Q0VF49 1180 aa15.57■□□□□ 0.08
FN1-202ENST00000336916 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
FN1-202ENST00000336916 TERF2IPQ9NYB0 399 aa15.56■□□□□ 0.08
FN1-202ENST00000336916 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
FN1-202ENST00000336916 HSCBQ8IWL3 235 aa15.55■□□□□ 0.08
FN1-202ENST00000336916 CUX1P39880 1505 aa15.54■□□□□ 0.08
FN1-202ENST00000336916 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
FN1-202ENST00000336916 RALBP1Q15311 655 aa15.53■□□□□ 0.08
FN1-202ENST00000336916 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
FN1-202ENST00000336916 CECR2Q9BXF3 1484 aa15.53■□□□□ 0.08
FN1-202ENST00000336916 CHMP4CQ96CF2 233 aa15.53■□□□□ 0.08
FN1-202ENST00000336916 PPP4R2Q9NY27 417 aa15.53■□□□□ 0.08
FN1-202ENST00000336916 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
FN1-202ENST00000336916 USP35Q9P2H5 1018 aa15.5■□□□□ 0.07
FN1-202ENST00000336916 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
FN1-202ENST00000336916 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
FN1-202ENST00000336916 NAP1L2Q9ULW6 460 aaPredicted RBP15.48■□□□□ 0.07
FN1-202ENST00000336916 NEUROD2Q15784 382 aa15.48■□□□□ 0.07
FN1-202ENST00000336916 MIER1Q8N108 512 aa15.47■□□□□ 0.07
FN1-202ENST00000336916 CSPP1Q1MSJ5 1256 aa15.47■□□□□ 0.07
FN1-202ENST00000336916 CC2D1BQ5T0F9 858 aaKnown RBP15.47■□□□□ 0.07
FN1-202ENST00000336916 HMMRO75330 724 aa15.47■□□□□ 0.07
FN1-202ENST00000336916 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
FN1-202ENST00000336916 STK31Q9BXU1 1019 aa15.46■□□□□ 0.06
FN1-202ENST00000336916 NUP155O75694 1391 aa15.45■□□□□ 0.06
FN1-202ENST00000336916 MLECQ14165 292 aa15.45■□□□□ 0.06
FN1-202ENST00000336916 LRRFIP1Q32MZ4 808 aaKnown RBP15.45■□□□□ 0.06
FN1-202ENST00000336916 GGT6Q6P531 493 aa15.45■□□□□ 0.06
FN1-202ENST00000336916 KIF3AQ9Y496 699 aa15.45■□□□□ 0.06
FN1-202ENST00000336916 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
FN1-202ENST00000336916 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
FN1-202ENST00000336916 CSB-PGBD3P0DP91 1061 aa15.44■□□□□ 0.06
FN1-202ENST00000336916 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
FN1-202ENST00000336916 TPM4P67936 248 aa15.43■□□□□ 0.06
FN1-202ENST00000336916 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
FN1-202ENST00000336916 HIRIP3Q9BW71 556 aaPredicted RBP15.42■□□□□ 0.06
FN1-202ENST00000336916 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
FN1-202ENST00000336916 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
FN1-202ENST00000336916 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
FN1-202ENST00000336916 G3V3G9 751 aa15.4■□□□□ 0.06
FN1-202ENST00000336916 DCAF8Q5TAQ9 597 aa15.4■□□□□ 0.06
FN1-202ENST00000336916 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
FN1-202ENST00000336916 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
FN1-202ENST00000336916 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
FN1-202ENST00000336916 RWDD1Q9H446 243 aaPredicted RBP15.39■□□□□ 0.05
FN1-202ENST00000336916 PKD2Q13563 968 aa15.39■□□□□ 0.05
FN1-202ENST00000336916 CLSTN1O94985 981 aa15.39■□□□□ 0.05
FN1-202ENST00000336916 CCDC144AA2RUR9 1427 aa15.38■□□□□ 0.05
FN1-202ENST00000336916 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
FN1-202ENST00000336916 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
FN1-202ENST00000336916 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
FN1-202ENST00000336916 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
FN1-202ENST00000336916 KIF21BO75037 1637 aa15.37■□□□□ 0.05
FN1-202ENST00000336916 PHF14O94880 888 aa15.36■□□□□ 0.05
FN1-202ENST00000336916 MSNP26038 577 aaKnown RBP15.36■□□□□ 0.05
FN1-202ENST00000336916 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
FN1-202ENST00000336916 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
FN1-202ENST00000336916 STK26Q9P289 416 aa15.35■□□□□ 0.05
FN1-202ENST00000336916 NGDNQ8NEJ9 315 aaKnown RBP15.34■□□□□ 0.05
FN1-202ENST00000336916 RGS3P49796 1198 aa15.34■□□□□ 0.05
FN1-202ENST00000336916 DRC7Q8IY82 874 aa15.34■□□□□ 0.05
FN1-202ENST00000336916 WWC1Q8IX03 1113 aa15.34■□□□□ 0.05
FN1-202ENST00000336916 NGEFQ8N5V2 710 aa15.34■□□□□ 0.05
FN1-202ENST00000336916 WASHC2AQ641Q2 1341 aa15.33■□□□□ 0.05
FN1-202ENST00000336916 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.04
FN1-202ENST00000336916 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.042e-9■■□□□ 12.6
FN1-202ENST00000336916 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
FN1-202ENST00000336916 AMPHP49418 695 aa15.32■□□□□ 0.04
FN1-202ENST00000336916 PLCB2Q00722 1185 aa15.32■□□□□ 0.04
FN1-202ENST00000336916 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
FN1-202ENST00000336916 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
FN1-202ENST00000336916 KIF3BO15066 747 aa15.31■□□□□ 0.04
FN1-202ENST00000336916 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
FN1-202ENST00000336916 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
FN1-202ENST00000336916 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
FN1-202ENST00000336916 ATAD2BQ9ULI0 1458 aa15.3■□□□□ 0.04
FN1-202ENST00000336916 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
FN1-202ENST00000336916 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
FN1-202ENST00000336916 EVC2Q86UK5 1308 aa15.3■□□□□ 0.04
FN1-202ENST00000336916 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
FN1-202ENST00000336916 SOX12O15370 315 aa15.29■□□□□ 0.04
FN1-202ENST00000336916 AMOTL1Q8IY63 956 aa15.29■□□□□ 0.04
FN1-202ENST00000336916 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms