RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 STRCQ7RTU9 1775 aa14.05□□□□□ -0.16
SKAP1-201ENST00000336915 PLEKHD1A6NEE1 506 aa14.04□□□□□ -0.16
SKAP1-201ENST00000336915 MLECQ14165 292 aa14.04□□□□□ -0.16
SKAP1-201ENST00000336915 POGZQ7Z3K3 1410 aa14.03□□□□□ -0.16
SKAP1-201ENST00000336915 CDC42BPBQ9Y5S2 1711 aa14.02□□□□□ -0.17
SKAP1-201ENST00000336915 ARHGEF12Q9NZN5 1544 aa14.02□□□□□ -0.17
SKAP1-201ENST00000336915 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
SKAP1-201ENST00000336915 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
SKAP1-201ENST00000336915 EEA1Q15075 1411 aa14□□□□□ -0.17
SKAP1-201ENST00000336915 C3P01024 1663 aa13.99□□□□□ -0.17
SKAP1-201ENST00000336915 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
SKAP1-201ENST00000336915 PLCH2O75038 1416 aa13.98□□□□□ -0.17
SKAP1-201ENST00000336915 ABCA6Q8N139 1617 aa13.98□□□□□ -0.17
SKAP1-201ENST00000336915 DIP2CQ9Y2E4 1556 aa13.97□□□□□ -0.17
SKAP1-201ENST00000336915 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
SKAP1-201ENST00000336915 KDM5CP41229 1560 aa13.96□□□□□ -0.17
SKAP1-201ENST00000336915 ATP10AO60312 1499 aa13.96□□□□□ -0.18
SKAP1-201ENST00000336915 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
SKAP1-201ENST00000336915 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
SKAP1-201ENST00000336915 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
SKAP1-201ENST00000336915 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
SKAP1-201ENST00000336915 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
SKAP1-201ENST00000336915 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
SKAP1-201ENST00000336915 PREX2Q70Z35 1606 aa13.93□□□□□ -0.18
SKAP1-201ENST00000336915 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
SKAP1-201ENST00000336915 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
SKAP1-201ENST00000336915 ATP1B4Q9UN42 357 aaPredicted RBP13.92□□□□□ -0.18
SKAP1-201ENST00000336915 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
SKAP1-201ENST00000336915 KIDINS220Q9ULH0 1771 aa13.9□□□□□ -0.18
SKAP1-201ENST00000336915 REREQ9P2R6 1566 aa13.89□□□□□ -0.19
SKAP1-201ENST00000336915 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
SKAP1-201ENST00000336915 ABCC1P33527 1531 aa13.88□□□□□ -0.19
SKAP1-201ENST00000336915 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
SKAP1-201ENST00000336915 TROQ12816 1431 aaPredicted RBP13.88□□□□□ -0.19
SKAP1-201ENST00000336915 AFAP1Q8N556 730 aa13.87□□□□□ -0.19
SKAP1-201ENST00000336915 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
SKAP1-201ENST00000336915 EFCAB2Q5VUJ9 269 aa13.86□□□□□ -0.19
SKAP1-201ENST00000336915 SPATA31D1Q6ZQQ2 1576 aa13.85□□□□□ -0.19
SKAP1-201ENST00000336915 ILDR2Q71H61 639 aa13.85□□□□□ -0.19
SKAP1-201ENST00000336915 TRAPPC8Q9Y2L5 1435 aa13.84□□□□□ -0.19
SKAP1-201ENST00000336915 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
SKAP1-201ENST00000336915 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
SKAP1-201ENST00000336915 CLIP1P30622 1438 aa13.82□□□□□ -0.2
SKAP1-201ENST00000336915 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
SKAP1-201ENST00000336915 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
SKAP1-201ENST00000336915 CLTCQ00610 1675 aaKnown RBP13.82□□□□□ -0.2
SKAP1-201ENST00000336915 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
SKAP1-201ENST00000336915 SAMD9LQ8IVG5 1584 aa13.81□□□□□ -0.2
SKAP1-201ENST00000336915 AGLP35573 1532 aa13.81□□□□□ -0.2
SKAP1-201ENST00000336915 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
SKAP1-201ENST00000336915 MLH3Q9UHC1 1453 aa13.81□□□□□ -0.2
SKAP1-201ENST00000336915 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
SKAP1-201ENST00000336915 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
SKAP1-201ENST00000336915 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
SKAP1-201ENST00000336915 CAMSAP1Q5T5Y3 1602 aa13.78□□□□□ -0.2
SKAP1-201ENST00000336915 ZNF142P52746 1687 aaPredicted RBP13.78□□□□□ -0.2
SKAP1-201ENST00000336915 PTPRTO14522 1441 aa13.77□□□□□ -0.2
SKAP1-201ENST00000336915 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
SKAP1-201ENST00000336915 NCOA1Q15788 1441 aa13.76□□□□□ -0.21
SKAP1-201ENST00000336915 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
SKAP1-201ENST00000336915 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
SKAP1-201ENST00000336915 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
SKAP1-201ENST00000336915 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
SKAP1-201ENST00000336915 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
SKAP1-201ENST00000336915 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
SKAP1-201ENST00000336915 ADGBQ8N7X0 1667 aa13.71□□□□□ -0.21
SKAP1-201ENST00000336915 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.22
SKAP1-201ENST00000336915 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.22
SKAP1-201ENST00000336915 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
SKAP1-201ENST00000336915 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
SKAP1-201ENST00000336915 SOCS7O14512 581 aa13.69□□□□□ -0.22
SKAP1-201ENST00000336915 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
SKAP1-201ENST00000336915 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
SKAP1-201ENST00000336915 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
SKAP1-201ENST00000336915 MYT1Q01538 1121 aa13.69□□□□□ -0.22
SKAP1-201ENST00000336915 NPATQ14207 1427 aa13.67□□□□□ -0.22
SKAP1-201ENST00000336915 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
SKAP1-201ENST00000336915 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
SKAP1-201ENST00000336915 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
SKAP1-201ENST00000336915 HNRNPMP52272 730 aaKnown RBP eCLIP13.65□□□□□ -0.22
SKAP1-201ENST00000336915 A2MP01023 1474 aa13.64□□□□□ -0.23
SKAP1-201ENST00000336915 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
SKAP1-201ENST00000336915 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
SKAP1-201ENST00000336915 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
SKAP1-201ENST00000336915 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
SKAP1-201ENST00000336915 PLA2R1Q13018 1463 aa13.62□□□□□ -0.23
SKAP1-201ENST00000336915 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
SKAP1-201ENST00000336915 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
SKAP1-201ENST00000336915 GGT6Q6P531 493 aa13.59□□□□□ -0.23
SKAP1-201ENST00000336915 KIAA1107Q9UPP5 1409 aa13.58□□□□□ -0.23
SKAP1-201ENST00000336915 PLEKHH2Q8IVE3 1493 aa13.58□□□□□ -0.24
SKAP1-201ENST00000336915 CFAP65Q6ZU64 1925 aaKnown RBP13.58□□□□□ -0.24
SKAP1-201ENST00000336915 UBAP1LF5GYI3 381 aa13.58□□□□□ -0.24
SKAP1-201ENST00000336915 CCNB3Q8WWL7 1395 aa13.57□□□□□ -0.24
SKAP1-201ENST00000336915 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
SKAP1-201ENST00000336915 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
SKAP1-201ENST00000336915 MED1Q15648 1581 aaPredicted RBP13.57□□□□□ -0.24
SKAP1-201ENST00000336915 A2ML1A8K2U0 1454 aa13.57□□□□□ -0.24
SKAP1-201ENST00000336915 CFDP1Q9UEE9 299 aaPredicted RBP13.56□□□□□ -0.24
SKAP1-201ENST00000336915 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms