RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 FYCO1Q9BQS8 1478 aa28.59■■■□□ 2.17
CMTM1-204ENST00000336328 LRRIQ1Q96JM4 1722 aa28.59■■■□□ 2.17
CMTM1-204ENST00000336328 ZFYVE16Q7Z3T8 1539 aa28.58■■■□□ 2.17
CMTM1-204ENST00000336328 ARHGAP5Q13017 1502 aa28.57■■■□□ 2.16
CMTM1-204ENST00000336328 PCF11O94913 1555 aaKnown RBP28.57■■■□□ 2.16
CMTM1-204ENST00000336328 BCORL1Q5H9F3 1711 aa28.57■■■□□ 2.16
CMTM1-204ENST00000336328 PTPRMP28827 1452 aa28.56■■■□□ 2.16
CMTM1-204ENST00000336328 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
CMTM1-204ENST00000336328 YEATS2Q9ULM3 1422 aa28.52■■■□□ 2.16
CMTM1-204ENST00000336328 MYT1LQ9UL68 1186 aa28.52■■■□□ 2.16
CMTM1-204ENST00000336328 ZNF518AQ6AHZ1 1483 aa28.51■■■□□ 2.15
CMTM1-204ENST00000336328 ATP10AO60312 1499 aa28.49■■■□□ 2.15
CMTM1-204ENST00000336328 AFAP1Q8N556 730 aa28.49■■■□□ 2.15
CMTM1-204ENST00000336328 CDC42BPBQ9Y5S2 1711 aa28.45■■■□□ 2.14
CMTM1-204ENST00000336328 MADDQ8WXG6 1647 aa28.44■■■□□ 2.14
CMTM1-204ENST00000336328 MLECQ14165 292 aa28.43■■■□□ 2.14
CMTM1-204ENST00000336328 C9orf84Q5VXU9 1444 aa28.43■■■□□ 2.14
CMTM1-204ENST00000336328 PREX2Q70Z35 1606 aa28.41■■■□□ 2.14
CMTM1-204ENST00000336328 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
CMTM1-204ENST00000336328 KDM5CP41229 1560 aa28.37■■■□□ 2.13
CMTM1-204ENST00000336328 ZNF777Q9ULD5 760 aaPredicted RBP28.37■■■□□ 2.13
CMTM1-204ENST00000336328 RIMS1Q86UR5 1692 aaKnown RBP28.36■■■□□ 2.13
CMTM1-204ENST00000336328 MLH3Q9UHC1 1453 aa28.36■■■□□ 2.13
CMTM1-204ENST00000336328 CEP162Q5TB80 1403 aa28.35■■■□□ 2.13
CMTM1-204ENST00000336328 CDC42BPAQ5VT25 1732 aa28.35■■■□□ 2.13
CMTM1-204ENST00000336328 CFDP1Q9UEE9 299 aaPredicted RBP28.34■■■□□ 2.13
CMTM1-204ENST00000336328 CCNB3Q8WWL7 1395 aa28.32■■■□□ 2.12
CMTM1-204ENST00000336328 TRAPPC8Q9Y2L5 1435 aa28.32■■■□□ 2.12
CMTM1-204ENST00000336328 ABCC1P33527 1531 aa28.32■■■□□ 2.12
CMTM1-204ENST00000336328 GPATCH8Q9UKJ3 1502 aaKnown RBP28.32■■■□□ 2.12
CMTM1-204ENST00000336328 PLPPR3Q6T4P5 718 aa28.31■■■□□ 2.12
CMTM1-204ENST00000336328 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
CMTM1-204ENST00000336328 ARHGEF12Q9NZN5 1544 aa28.29■■■□□ 2.12
CMTM1-204ENST00000336328 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
CMTM1-204ENST00000336328 ITSN2Q9NZM3 1697 aa28.27■■■□□ 2.12
CMTM1-204ENST00000336328 FER1L4A9Z1Z3 1794 aa28.27■■■□□ 2.12
CMTM1-204ENST00000336328 ESF1Q9H501 851 aaKnown RBP28.26■■■□□ 2.11
CMTM1-204ENST00000336328 REREQ9P2R6 1566 aa28.25■■■□□ 2.11
CMTM1-204ENST00000336328 HNRNPMP52272 730 aaKnown RBP eCLIP28.25■■■□□ 2.11
CMTM1-204ENST00000336328 KIAA1107Q9UPP5 1409 aa28.25■■■□□ 2.11
CMTM1-204ENST00000336328 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
CMTM1-204ENST00000336328 SPAG9O60271 1321 aaKnown RBP28.23■■■□□ 2.11
CMTM1-204ENST00000336328 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
CMTM1-204ENST00000336328 LMTK3Q96Q04 1460 aa28.21■■■□□ 2.11
CMTM1-204ENST00000336328 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
CMTM1-204ENST00000336328 AGLP35573 1532 aa28.19■■■□□ 2.1
CMTM1-204ENST00000336328 EHBP1L1Q8N3D4 1523 aa28.19■■■□□ 2.1
CMTM1-204ENST00000336328 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
CMTM1-204ENST00000336328 ILDR1Q86SU0 546 aaPredicted RBP28.17■■■□□ 2.1
CMTM1-204ENST00000336328 KIDINS220Q9ULH0 1771 aa28.16■■■□□ 2.1
CMTM1-204ENST00000336328 SYCP2Q9BX26 1530 aa28.16■■■□□ 2.1
CMTM1-204ENST00000336328 SETD1BQ9UPS6 1966 aaKnown RBP28.15■■■□□ 2.1
CMTM1-204ENST00000336328 CEBPAP49715 358 aaPredicted RBP28.14■■■□□ 2.1
CMTM1-204ENST00000336328 HSPA2P54652 639 aa28.12■■■□□ 2.09
CMTM1-204ENST00000336328 RSPH4AQ5TD94 716 aa28.11■■■□□ 2.09
CMTM1-204ENST00000336328 VPS8Q8N3P4 1428 aa28.08■■■□□ 2.09
CMTM1-204ENST00000336328 CNTLNQ9NXG0 1405 aa28.08■■■□□ 2.09
CMTM1-204ENST00000336328 TIAM1Q13009 1591 aa28.07■■■□□ 2.08
CMTM1-204ENST00000336328 ZNF644Q9H582 1327 aaPredicted RBP28.07■■■□□ 2.08
CMTM1-204ENST00000336328 ATP7AQ04656 1500 aa28.06■■■□□ 2.08
CMTM1-204ENST00000336328 SUPT6HQ7KZ85 1726 aaKnown RBP28.05■■■□□ 2.08
CMTM1-204ENST00000336328 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
CMTM1-204ENST00000336328 PPP6R1Q9UPN7 881 aa28.02■■■□□ 2.08
CMTM1-204ENST00000336328 PREX1Q8TCU6 1659 aa28.02■■■□□ 2.08
CMTM1-204ENST00000336328 A2MP01023 1474 aa28.02■■■□□ 2.08
CMTM1-204ENST00000336328 MBD5Q9P267 1494 aa28.01■■■□□ 2.07
CMTM1-204ENST00000336328 RTEL1-TNFRSF6BF6WH68 1400 aa28.01■■■□□ 2.07
CMTM1-204ENST00000336328 UHRF1BP1Q6BDS2 1440 aa28.01■■■□□ 2.07
CMTM1-204ENST00000336328 DMRT2Q9Y5R5 561 aa28■■■□□ 2.07
CMTM1-204ENST00000336328 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
CMTM1-204ENST00000336328 TSPY4P0CV99 314 aa27.96■■■□□ 2.07
CMTM1-204ENST00000336328 TSPY10P0CW01 314 aa27.96■■■□□ 2.07
CMTM1-204ENST00000336328 APLP2Q06481 763 aa27.96■■■□□ 2.07
CMTM1-204ENST00000336328 GGT6Q6P531 493 aa27.96■■■□□ 2.07
CMTM1-204ENST00000336328 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.07
CMTM1-204ENST00000336328 C3P01024 1663 aa27.95■■■□□ 2.07
CMTM1-204ENST00000336328 FBXO41Q8TF61 875 aa27.95■■■□□ 2.06
CMTM1-204ENST00000336328 MAP3K1Q13233 1512 aa27.95■■■□□ 2.06
CMTM1-204ENST00000336328 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
CMTM1-204ENST00000336328 ADGBQ8N7X0 1667 aa27.94■■■□□ 2.06
CMTM1-204ENST00000336328 CCDC141Q6ZP82 1450 aa27.91■■■□□ 2.06
CMTM1-204ENST00000336328 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
CMTM1-204ENST00000336328 PLXNC1O60486 1568 aa27.9■■■□□ 2.06
CMTM1-204ENST00000336328 MROH2AA6NES4 1674 aa27.9■■■□□ 2.06
CMTM1-204ENST00000336328 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.06
CMTM1-204ENST00000336328 NPATQ14207 1427 aa27.89■■■□□ 2.06
CMTM1-204ENST00000336328 KANK4Q5T7N3 995 aaPredicted RBP27.87■■■□□ 2.05
CMTM1-204ENST00000336328 KIF3BO15066 747 aa27.83■■■□□ 2.05
CMTM1-204ENST00000336328 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
CMTM1-204ENST00000336328 MIA2Q96PC5 1412 aa27.81■■■□□ 2.04
CMTM1-204ENST00000336328 CLTCQ00610 1675 aaKnown RBP27.79■■■□□ 2.04
CMTM1-204ENST00000336328 CERKQ8TCT0 537 aa27.78■■■□□ 2.04
CMTM1-204ENST00000336328 MYOM3Q5VTT5 1437 aa27.76■■■□□ 2.04
CMTM1-204ENST00000336328 STRCQ7RTU9 1775 aa27.75■■■□□ 2.03
CMTM1-204ENST00000336328 WASHC2CQ9Y4E1 1318 aa27.74■■■□□ 2.03
CMTM1-204ENST00000336328 PTPRTO14522 1441 aa27.74■■■□□ 2.03
CMTM1-204ENST00000336328 PTPRKQ15262 1439 aa27.73■■■□□ 2.03
CMTM1-204ENST00000336328 FAM135AQ9P2D6 1515 aa27.7■■■□□ 2.02
CMTM1-204ENST00000336328 NCOA1Q15788 1441 aa27.67■■■□□ 2.02
CMTM1-204ENST00000336328 PKD2Q13563 968 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms