RNA–Protein interactions for RNA: ENST00000335221.9

BPTF-203, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5 BASIC

Gene BPTF, Length 2,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-203ENST00000335221 TMED8Q6PL24 325 aaPredicted RBP11.54□□□□□ -0.56
BPTF-203ENST00000335221 DMTNQ08495 405 aa11.53□□□□□ -0.56
BPTF-203ENST00000335221 L1TD1Q5T7N2 865 aaKnown RBP11.53□□□□□ -0.56
BPTF-203ENST00000335221 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
BPTF-203ENST00000335221 E9PSI1 815 aa11.52□□□□□ -0.57
BPTF-203ENST00000335221 BAZ1BQ9UIG0 1483 aaKnown RBP11.5□□□□□ -0.57
BPTF-203ENST00000335221 PTMSP20962 102 aa11.5□□□□□ -0.57
BPTF-203ENST00000335221 KIF20AO95235 890 aa11.49□□□□□ -0.57
BPTF-203ENST00000335221 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
BPTF-203ENST00000335221 ZNF622Q969S3 477 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■□□ 14.8
BPTF-203ENST00000335221 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
BPTF-203ENST00000335221 MMP14P50281 582 aa11.48□□□□□ -0.57
BPTF-203ENST00000335221 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
BPTF-203ENST00000335221 WIZO95785 1651 aa11.48□□□□□ -0.57
BPTF-203ENST00000335221 IGSF3O75054 1194 aa11.48□□□□□ -0.57
BPTF-203ENST00000335221 FAM43BQ6ZT52 329 aaPredicted RBP11.47□□□□□ -0.57
BPTF-203ENST00000335221 SLC52A1Q9NWF4 448 aa11.47□□□□□ -0.57
BPTF-203ENST00000335221 UNC13AQ9UPW8 1703 aa11.47□□□□□ -0.57
BPTF-203ENST00000335221 TAF3Q5VWG9 929 aa11.47□□□□□ -0.57
BPTF-203ENST00000335221 PLCD4Q9BRC7 762 aa11.46□□□□□ -0.58
BPTF-203ENST00000335221 AXDND1Q5T1B0 1012 aaPredicted RBP11.45□□□□□ -0.58
BPTF-203ENST00000335221 CLSTN1O94985 981 aa11.44□□□□□ -0.58
BPTF-203ENST00000335221 FAM13BQ9NYF5 915 aa11.44□□□□□ -0.58
BPTF-203ENST00000335221 KCNA4P22459 653 aa11.43□□□□□ -0.58
BPTF-203ENST00000335221 MTERF4Q7Z6M4 381 aaKnown RBP11.42□□□□□ -0.58
BPTF-203ENST00000335221 CERS3Q8IU89 383 aa11.42□□□□□ -0.58
BPTF-203ENST00000335221 AEBP1Q8IUX7 1158 aa11.42□□□□□ -0.58
BPTF-203ENST00000335221 LETM1O95202 739 aaPredicted RBP11.42□□□□□ -0.58
BPTF-203ENST00000335221 CCER2I3L3R5 266 aa11.41□□□□□ -0.58
BPTF-203ENST00000335221 KIAA1211Q6ZU35 1233 aa11.41□□□□□ -0.58
BPTF-203ENST00000335221 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
BPTF-203ENST00000335221 EEA1Q15075 1411 aa11.41□□□□□ -0.58
BPTF-203ENST00000335221 SOX12O15370 315 aa11.41□□□□□ -0.58
BPTF-203ENST00000335221 MCCP23508 829 aa11.41□□□□□ -0.58
BPTF-203ENST00000335221 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
BPTF-203ENST00000335221 PSEN1P49768 467 aa11.4□□□□□ -0.58
BPTF-203ENST00000335221 TRIM44Q96DX7 344 aaPredicted RBP11.4□□□□□ -0.58
BPTF-203ENST00000335221 BAZ1AQ9NRL2 1556 aaPredicted RBP11.4□□□□□ -0.58
BPTF-203ENST00000335221 ARID3AQ99856 593 aa11.4□□□□□ -0.58
BPTF-203ENST00000335221 GTPBP4Q9BZE4 634 aaKnown RBP11.4□□□□□ -0.58
BPTF-203ENST00000335221 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
BPTF-203ENST00000335221 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
BPTF-203ENST00000335221 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
BPTF-203ENST00000335221 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
BPTF-203ENST00000335221 P3H3Q8IVL6 736 aa11.39□□□□□ -0.59
BPTF-203ENST00000335221 ESPNB1AK53 854 aa11.38□□□□□ -0.59
BPTF-203ENST00000335221 ZBTB22O15209 634 aa11.38□□□□□ -0.59
BPTF-203ENST00000335221 PHF14O94880 888 aa11.38□□□□□ -0.59
BPTF-203ENST00000335221 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
BPTF-203ENST00000335221 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
BPTF-203ENST00000335221 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
BPTF-203ENST00000335221 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
BPTF-203ENST00000335221 DNAJC2Q99543 621 aaKnown RBP11.36□□□□□ -0.59
BPTF-203ENST00000335221 BICRAQ9NZM4 1560 aa11.36□□□□□ -0.59
BPTF-203ENST00000335221 ANP32CO43423 234 aa11.35□□□□□ -0.59
BPTF-203ENST00000335221 CGNQ9P2M7 1197 aaKnown RBP11.35□□□□□ -0.59
BPTF-203ENST00000335221 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
BPTF-203ENST00000335221 RIPK4P57078 832 aa11.34□□□□□ -0.59
BPTF-203ENST00000335221 DDX10Q13206 875 aaKnown RBP11.34□□□□□ -0.59
BPTF-203ENST00000335221 OS9Q13438 667 aaPredicted RBP11.33□□□□□ -0.6
BPTF-203ENST00000335221 RALBP1Q15311 655 aa11.32□□□□□ -0.6
BPTF-203ENST00000335221 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
BPTF-203ENST00000335221 POGKQ9P215 609 aa11.32□□□□□ -0.6
BPTF-203ENST00000335221 GOLGA6L3A6NEY3 463 aa11.31□□□□□ -0.6
BPTF-203ENST00000335221 XRCC6P12956 609 aaKnown RBP eCLIP11.31□□□□□ -0.6
BPTF-203ENST00000335221 TERF1P54274 439 aa11.31□□□□□ -0.6
BPTF-203ENST00000335221 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
BPTF-203ENST00000335221 PSMD1Q99460 953 aa11.31□□□□□ -0.6
BPTF-203ENST00000335221 PDE4AP27815 886 aa11.3□□□□□ -0.6
BPTF-203ENST00000335221 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
BPTF-203ENST00000335221 CCDC94Q9BW85 323 aaPredicted RBP11.3□□□□□ -0.6
BPTF-203ENST00000335221 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
BPTF-203ENST00000335221 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
BPTF-203ENST00000335221 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
BPTF-203ENST00000335221 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
BPTF-203ENST00000335221 CARD10Q9BWT7 1032 aa11.27□□□□□ -0.6
BPTF-203ENST00000335221 GEMIN8Q9NWZ8 242 aaKnown RBP11.27□□□□□ -0.6
BPTF-203ENST00000335221 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
BPTF-203ENST00000335221 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.26□□□□□ -0.61
BPTF-203ENST00000335221 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
BPTF-203ENST00000335221 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
BPTF-203ENST00000335221 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
BPTF-203ENST00000335221 YY1AP1Q9H869 796 aa11.26□□□□□ -0.61
BPTF-203ENST00000335221 ERBB4Q15303 1308 aa11.25□□□□□ -0.61
BPTF-203ENST00000335221 EGFL6Q8IUX8 553 aa11.25□□□□□ -0.61
BPTF-203ENST00000335221 SIN3AQ96ST3 1273 aa11.25□□□□□ -0.61
BPTF-203ENST00000335221 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
BPTF-203ENST00000335221 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
BPTF-203ENST00000335221 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
BPTF-203ENST00000335221 OFD1O75665 1012 aa11.23□□□□□ -0.61
BPTF-203ENST00000335221 KCNJ4P48050 445 aa11.23□□□□□ -0.61
BPTF-203ENST00000335221 ZBTB9Q96C00 473 aa11.23□□□□□ -0.61
BPTF-203ENST00000335221 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
BPTF-203ENST00000335221 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
BPTF-203ENST00000335221 BANK1Q8NDB2 785 aa11.22□□□□□ -0.61
BPTF-203ENST00000335221 SMARCA2P51531 1590 aa11.22□□□□□ -0.61
BPTF-203ENST00000335221 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.62
BPTF-203ENST00000335221 DYNC1I1O14576 645 aa11.21□□□□□ -0.62
BPTF-203ENST00000335221 UQCRHP07919 91 aa11.21□□□□□ -0.62
BPTF-203ENST00000335221 SETQ01105 290 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms