RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 TIAM1Q13009 1591 aa29.14■■■□□ 2.26
HLA-F-217ENST00000334668 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
HLA-F-217ENST00000334668 AKNAQ7Z591 1439 aa29.13■■■□□ 2.25
HLA-F-217ENST00000334668 MAP3K1Q13233 1512 aa29.13■■■□□ 2.25
HLA-F-217ENST00000334668 CDC42BPBQ9Y5S2 1711 aa29.12■■■□□ 2.25
HLA-F-217ENST00000334668 EHBP1L1Q8N3D4 1523 aa29.12■■■□□ 2.25
HLA-F-217ENST00000334668 CDC42BPAQ5VT25 1732 aa29.1■■■□□ 2.25
HLA-F-217ENST00000334668 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
HLA-F-217ENST00000334668 MAPK8IP2Q13387 824 aaPredicted RBP29.09■■■□□ 2.25
HLA-F-217ENST00000334668 EFCAB2Q5VUJ9 269 aa29.08■■■□□ 2.25
HLA-F-217ENST00000334668 FRMPD1Q5SYB0 1578 aa29.05■■■□□ 2.24
HLA-F-217ENST00000334668 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
HLA-F-217ENST00000334668 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
HLA-F-217ENST00000334668 GPATCH8Q9UKJ3 1502 aaKnown RBP29.03■■■□□ 2.24
HLA-F-217ENST00000334668 DENND4BO75064 1496 aaPredicted RBP29.03■■■□□ 2.24
HLA-F-217ENST00000334668 RAPGEF3O95398 923 aa29.02■■■□□ 2.24
HLA-F-217ENST00000334668 LRRC9Q6ZRR7 1453 aa29.02■■■□□ 2.24
HLA-F-217ENST00000334668 ADGRL1O94910 1474 aa29.01■■■□□ 2.23
HLA-F-217ENST00000334668 SCAF1Q9H7N4 1312 aaKnown RBP28.99■■■□□ 2.23
HLA-F-217ENST00000334668 SUPT6HQ7KZ85 1726 aaKnown RBP28.99■■■□□ 2.23
HLA-F-217ENST00000334668 SCAPERQ9BY12 1400 aa28.98■■■□□ 2.23
HLA-F-217ENST00000334668 CCNB3Q8WWL7 1395 aa28.97■■■□□ 2.23
HLA-F-217ENST00000334668 NCOA2Q15596 1464 aa28.94■■■□□ 2.22
HLA-F-217ENST00000334668 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
HLA-F-217ENST00000334668 POGZQ7Z3K3 1410 aa28.94■■■□□ 2.22
HLA-F-217ENST00000334668 ZMYM4Q5VZL5 1548 aa28.93■■■□□ 2.22
HLA-F-217ENST00000334668 ABCC1P33527 1531 aa28.91■■■□□ 2.22
HLA-F-217ENST00000334668 ITSN2Q9NZM3 1697 aa28.91■■■□□ 2.22
HLA-F-217ENST00000334668 SAMD9LQ8IVG5 1584 aa28.88■■■□□ 2.21
HLA-F-217ENST00000334668 APLP2Q06481 763 aa28.88■■■□□ 2.21
HLA-F-217ENST00000334668 CFDP1Q9UEE9 299 aaPredicted RBP28.88■■■□□ 2.21
HLA-F-217ENST00000334668 ARHGEF12Q9NZN5 1544 aa28.88■■■□□ 2.21
HLA-F-217ENST00000334668 ZNF518AQ6AHZ1 1483 aa28.85■■■□□ 2.21
HLA-F-217ENST00000334668 MAGI2Q86UL8 1455 aa28.85■■■□□ 2.21
HLA-F-217ENST00000334668 KDM5CP41229 1560 aa28.85■■■□□ 2.21
HLA-F-217ENST00000334668 KIAA1107Q9UPP5 1409 aa28.83■■■□□ 2.21
HLA-F-217ENST00000334668 PLEKHH2Q8IVE3 1493 aa28.82■■■□□ 2.2
HLA-F-217ENST00000334668 ARHGEF40Q8TER5 1519 aa28.82■■■□□ 2.2
HLA-F-217ENST00000334668 TRAPPC8Q9Y2L5 1435 aa28.81■■■□□ 2.2
HLA-F-217ENST00000334668 DMRT2Q9Y5R5 561 aa28.81■■■□□ 2.2
HLA-F-217ENST00000334668 AFAP1Q8N556 730 aa28.8■■■□□ 2.2
HLA-F-217ENST00000334668 ZNF777Q9ULD5 760 aaPredicted RBP28.8■■■□□ 2.2
HLA-F-217ENST00000334668 SYCP2Q9BX26 1530 aa28.79■■■□□ 2.2
HLA-F-217ENST00000334668 ZFYVE16Q7Z3T8 1539 aa28.78■■■□□ 2.2
HLA-F-217ENST00000334668 YEATS2Q9ULM3 1422 aa28.76■■■□□ 2.19
HLA-F-217ENST00000334668 ZNF644Q9H582 1327 aaPredicted RBP28.74■■■□□ 2.19
HLA-F-217ENST00000334668 MLH3Q9UHC1 1453 aa28.74■■■□□ 2.19
HLA-F-217ENST00000334668 HECW2Q9P2P5 1572 aa28.73■■■□□ 2.19
HLA-F-217ENST00000334668 MYOM3Q5VTT5 1437 aa28.72■■■□□ 2.19
HLA-F-217ENST00000334668 KDM4FA0A1W2PPD8 638 aa28.72■■■□□ 2.19
HLA-F-217ENST00000334668 HNRNPMP52272 730 aaKnown RBP eCLIP28.72■■■□□ 2.19
HLA-F-217ENST00000334668 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
HLA-F-217ENST00000334668 MIA2Q96PC5 1412 aa28.69■■■□□ 2.18
HLA-F-217ENST00000334668 CAMSAP2Q08AD1 1489 aa28.69■■■□□ 2.18
HLA-F-217ENST00000334668 KIDINS220Q9ULH0 1771 aa28.68■■■□□ 2.18
HLA-F-217ENST00000334668 ATP10AO60312 1499 aa28.67■■■□□ 2.18
HLA-F-217ENST00000334668 PPP4R3CPQ6ZMV5 832 aa28.65■■■□□ 2.18
HLA-F-217ENST00000334668 SIGLEC1Q9BZZ2 1709 aa28.65■■■□□ 2.18
HLA-F-217ENST00000334668 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.18
HLA-F-217ENST00000334668 ABCA6Q8N139 1617 aa28.63■■■□□ 2.17
HLA-F-217ENST00000334668 C9orf84Q5VXU9 1444 aa28.62■■■□□ 2.17
HLA-F-217ENST00000334668 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
HLA-F-217ENST00000334668 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
HLA-F-217ENST00000334668 REREQ9P2R6 1566 aa28.61■■■□□ 2.17
HLA-F-217ENST00000334668 INO80Q9ULG1 1556 aaPredicted RBP28.61■■■□□ 2.17
HLA-F-217ENST00000334668 SPAG9O60271 1321 aaKnown RBP28.61■■■□□ 2.17
HLA-F-217ENST00000334668 BCORL1Q5H9F3 1711 aa28.59■■■□□ 2.17
HLA-F-217ENST00000334668 CCDC141Q6ZP82 1450 aa28.58■■■□□ 2.17
HLA-F-217ENST00000334668 ATP7AQ04656 1500 aa28.58■■■□□ 2.17
HLA-F-217ENST00000334668 ADAMTSL3P82987 1691 aa28.57■■■□□ 2.16
HLA-F-217ENST00000334668 FGD6Q6ZV73 1430 aa28.56■■■□□ 2.16
HLA-F-217ENST00000334668 PTPN23Q9H3S7 1636 aa28.55■■■□□ 2.16
HLA-F-217ENST00000334668 RTEL1-TNFRSF6BF6WH68 1400 aa28.55■■■□□ 2.16
HLA-F-217ENST00000334668 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
HLA-F-217ENST00000334668 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
HLA-F-217ENST00000334668 ARID4BQ4LE39 1312 aaPredicted RBP28.53■■■□□ 2.16
HLA-F-217ENST00000334668 AGLP35573 1532 aa28.5■■■□□ 2.15
HLA-F-217ENST00000334668 MAST1Q9Y2H9 1570 aa28.46■■■□□ 2.15
HLA-F-217ENST00000334668 ADGBQ8N7X0 1667 aa28.46■■■□□ 2.15
HLA-F-217ENST00000334668 PLXNC1O60486 1568 aa28.45■■■□□ 2.15
HLA-F-217ENST00000334668 MADDQ8WXG6 1647 aa28.43■■■□□ 2.14
HLA-F-217ENST00000334668 TSPY4P0CV99 314 aa28.43■■■□□ 2.14
HLA-F-217ENST00000334668 TSPY10P0CW01 314 aa28.43■■■□□ 2.14
HLA-F-217ENST00000334668 A2MP01023 1474 aa28.42■■■□□ 2.14
HLA-F-217ENST00000334668 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
HLA-F-217ENST00000334668 CROCC2H7BZ55 1655 aa28.4■■■□□ 2.14
HLA-F-217ENST00000334668 ABCC5O15440 1437 aa28.4■■■□□ 2.14
HLA-F-217ENST00000334668 SHANK2Q9UPX8 1470 aa28.39■■■□□ 2.13
HLA-F-217ENST00000334668 PPARGC1BQ86YN6 1023 aaKnown RBP28.38■■■□□ 2.13
HLA-F-217ENST00000334668 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
HLA-F-217ENST00000334668 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
HLA-F-217ENST00000334668 DAPK1P53355 1430 aa28.36■■■□□ 2.13
HLA-F-217ENST00000334668 MLECQ14165 292 aa28.36■■■□□ 2.13
HLA-F-217ENST00000334668 PTPRMP28827 1452 aa28.35■■■□□ 2.13
HLA-F-217ENST00000334668 RIMS1Q86UR5 1692 aaKnown RBP28.34■■■□□ 2.13
HLA-F-217ENST00000334668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.28■■■□□ 2.12
HLA-F-217ENST00000334668 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
HLA-F-217ENST00000334668 RRBP1Q9P2E9 1410 aaKnown RBP28.23■■■□□ 2.11
HLA-F-217ENST00000334668 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
HLA-F-217ENST00000334668 ADGRL2O95490 1459 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms