RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
TREM1-202ENST00000334475 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.28
TREM1-202ENST00000334475 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
TREM1-202ENST00000334475 PHLDB1Q86UU1 1377 aa13.3□□□□□ -0.28
TREM1-202ENST00000334475 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
TREM1-202ENST00000334475 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
TREM1-202ENST00000334475 KIAA0556O60303 1618 aa13.29□□□□□ -0.28
TREM1-202ENST00000334475 MAP3K4Q9Y6R4 1608 aa13.29□□□□□ -0.28
TREM1-202ENST00000334475 DHX57Q6P158 1386 aaKnown RBP13.28□□□□□ -0.28
TREM1-202ENST00000334475 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
TREM1-202ENST00000334475 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
TREM1-202ENST00000334475 UACAQ9BZF9 1416 aa13.27□□□□□ -0.29
TREM1-202ENST00000334475 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
TREM1-202ENST00000334475 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
TREM1-202ENST00000334475 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
TREM1-202ENST00000334475 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
TREM1-202ENST00000334475 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
TREM1-202ENST00000334475 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
TREM1-202ENST00000334475 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
TREM1-202ENST00000334475 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
TREM1-202ENST00000334475 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
TREM1-202ENST00000334475 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
TREM1-202ENST00000334475 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
TREM1-202ENST00000334475 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
TREM1-202ENST00000334475 PTPN23Q9H3S7 1636 aa13.18□□□□□ -0.3
TREM1-202ENST00000334475 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
TREM1-202ENST00000334475 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
TREM1-202ENST00000334475 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
TREM1-202ENST00000334475 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
TREM1-202ENST00000334475 CAPN15O75808 1086 aa13.16□□□□□ -0.3
TREM1-202ENST00000334475 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
TREM1-202ENST00000334475 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
TREM1-202ENST00000334475 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
TREM1-202ENST00000334475 WDR7Q9Y4E6 1490 aa13.15□□□□□ -0.3
TREM1-202ENST00000334475 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
TREM1-202ENST00000334475 ABCA8O94911 1581 aa13.13□□□□□ -0.31
TREM1-202ENST00000334475 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
TREM1-202ENST00000334475 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
TREM1-202ENST00000334475 TEX14Q8IWB6 1497 aa13.12□□□□□ -0.31
TREM1-202ENST00000334475 CDK13Q14004 1512 aaKnown RBP13.12□□□□□ -0.31
TREM1-202ENST00000334475 HFM1A2PYH4 1435 aa13.12□□□□□ -0.31
TREM1-202ENST00000334475 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
TREM1-202ENST00000334475 NUP153P49790 1475 aaKnown RBP13.11□□□□□ -0.31
TREM1-202ENST00000334475 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
TREM1-202ENST00000334475 ITGAEP38570 1179 aa13.1□□□□□ -0.31
TREM1-202ENST00000334475 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
TREM1-202ENST00000334475 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
TREM1-202ENST00000334475 ACIN1Q9UKV3 1341 aaKnown RBP13.09□□□□□ -0.31
TREM1-202ENST00000334475 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
TREM1-202ENST00000334475 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
TREM1-202ENST00000334475 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
TREM1-202ENST00000334475 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
TREM1-202ENST00000334475 DNMT1P26358 1616 aaKnown RBP13.05□□□□□ -0.32
TREM1-202ENST00000334475 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
TREM1-202ENST00000334475 DSG3P32926 999 aa13.04□□□□□ -0.32
TREM1-202ENST00000334475 NAIPQ13075 1403 aa13.04□□□□□ -0.32
TREM1-202ENST00000334475 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
TREM1-202ENST00000334475 ATP10BO94823 1461 aa13.04□□□□□ -0.32
TREM1-202ENST00000334475 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
TREM1-202ENST00000334475 ARAP3Q8WWN8 1544 aa13.02□□□□□ -0.33
TREM1-202ENST00000334475 RAPGEF3O95398 923 aa13.01□□□□□ -0.33
TREM1-202ENST00000334475 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
TREM1-202ENST00000334475 ADGBQ8N7X0 1667 aa13.01□□□□□ -0.33
TREM1-202ENST00000334475 PTPRMP28827 1452 aa13□□□□□ -0.33
TREM1-202ENST00000334475 KIF14Q15058 1648 aa12.99□□□□□ -0.33
TREM1-202ENST00000334475 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
TREM1-202ENST00000334475 CROCC2H7BZ55 1655 aa12.99□□□□□ -0.33
TREM1-202ENST00000334475 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
TREM1-202ENST00000334475 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
TREM1-202ENST00000334475 ABCA9Q8IUA7 1624 aa12.97□□□□□ -0.33
TREM1-202ENST00000334475 DAPK1P53355 1430 aa12.96□□□□□ -0.33
TREM1-202ENST00000334475 CDC42BPAQ5VT25 1732 aa12.96□□□□□ -0.34
TREM1-202ENST00000334475 MADDQ8WXG6 1647 aa12.95□□□□□ -0.34
TREM1-202ENST00000334475 ZBTB22O15209 634 aa12.95□□□□□ -0.34
TREM1-202ENST00000334475 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
TREM1-202ENST00000334475 LMTK3Q96Q04 1460 aa12.95□□□□□ -0.34
TREM1-202ENST00000334475 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
TREM1-202ENST00000334475 CAMSAP2Q08AD1 1489 aa12.93□□□□□ -0.34
TREM1-202ENST00000334475 ADGRL2O95490 1459 aa12.92□□□□□ -0.34
TREM1-202ENST00000334475 ABCC5O15440 1437 aa12.92□□□□□ -0.34
TREM1-202ENST00000334475 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
TREM1-202ENST00000334475 HSPA2P54652 639 aa12.9□□□□□ -0.34
TREM1-202ENST00000334475 ARHGEF5Q12774 1597 aa12.89□□□□□ -0.35
TREM1-202ENST00000334475 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
TREM1-202ENST00000334475 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
TREM1-202ENST00000334475 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
TREM1-202ENST00000334475 NEO1Q92859 1461 aa12.87□□□□□ -0.35
TREM1-202ENST00000334475 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
TREM1-202ENST00000334475 RICTORQ6R327 1708 aa12.87□□□□□ -0.35
TREM1-202ENST00000334475 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
TREM1-202ENST00000334475 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
TREM1-202ENST00000334475 ABCB7O75027 752 aa12.85□□□□□ -0.35
TREM1-202ENST00000334475 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
TREM1-202ENST00000334475 CFDP1Q9UEE9 299 aaPredicted RBP12.85□□□□□ -0.35
TREM1-202ENST00000334475 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
TREM1-202ENST00000334475 PPP1R15AO75807 674 aaPredicted RBP12.84□□□□□ -0.35
TREM1-202ENST00000334475 RRP7BPQ9NSQ0 103 aa12.84□□□□□ -0.35
TREM1-202ENST00000334475 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
TREM1-202ENST00000334475 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
TREM1-202ENST00000334475 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms