RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TONSLQ96HA7 1378 aa16.5■□□□□ 0.23
HDAC6-201ENST00000334136 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
HDAC6-201ENST00000334136 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
HDAC6-201ENST00000334136 KANK1Q14678 1352 aa16.49■□□□□ 0.23
HDAC6-201ENST00000334136 ARHGAP5Q13017 1502 aa16.48■□□□□ 0.23
HDAC6-201ENST00000334136 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
HDAC6-201ENST00000334136 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
HDAC6-201ENST00000334136 SETD5Q9C0A6 1442 aa16.47■□□□□ 0.23
HDAC6-201ENST00000334136 MIER1Q8N108 512 aa16.47■□□□□ 0.23
HDAC6-201ENST00000334136 ATP10BO94823 1461 aa16.45■□□□□ 0.22
HDAC6-201ENST00000334136 RAPGEF6Q8TEU7 1601 aa16.44■□□□□ 0.22
HDAC6-201ENST00000334136 CD109Q6YHK3 1445 aa16.43■□□□□ 0.22
HDAC6-201ENST00000334136 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
HDAC6-201ENST00000334136 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
HDAC6-201ENST00000334136 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
HDAC6-201ENST00000334136 NUP155O75694 1391 aa16.41■□□□□ 0.22
HDAC6-201ENST00000334136 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
HDAC6-201ENST00000334136 ASXL2Q76L83 1435 aa16.4■□□□□ 0.22
HDAC6-201ENST00000334136 RAPGEF3O95398 923 aa16.39■□□□□ 0.21
HDAC6-201ENST00000334136 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
HDAC6-201ENST00000334136 PKD2Q13563 968 aa16.38■□□□□ 0.21
HDAC6-201ENST00000334136 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
HDAC6-201ENST00000334136 MIA2Q96PC5 1412 aa16.38■□□□□ 0.21
HDAC6-201ENST00000334136 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
HDAC6-201ENST00000334136 PPP1R15AO75807 674 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-201ENST00000334136 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
HDAC6-201ENST00000334136 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
HDAC6-201ENST00000334136 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-201ENST00000334136 ABCC2Q92887 1545 aa16.36■□□□□ 0.21
HDAC6-201ENST00000334136 PLEKHH2Q8IVE3 1493 aa16.35■□□□□ 0.21
HDAC6-201ENST00000334136 MPHOSPH9Q99550 1183 aa16.34■□□□□ 0.21
HDAC6-201ENST00000334136 KIF14Q15058 1648 aa16.34■□□□□ 0.21
HDAC6-201ENST00000334136 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
HDAC6-201ENST00000334136 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
HDAC6-201ENST00000334136 FOXD1Q16676 465 aa16.33■□□□□ 0.2
HDAC6-201ENST00000334136 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
HDAC6-201ENST00000334136 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
HDAC6-201ENST00000334136 FKBP8Q14318 412 aa16.32■□□□□ 0.2
HDAC6-201ENST00000334136 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
HDAC6-201ENST00000334136 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
HDAC6-201ENST00000334136 ANP32CO43423 234 aa16.28■□□□□ 0.2
HDAC6-201ENST00000334136 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
HDAC6-201ENST00000334136 FANCAO15360 1455 aa16.25■□□□□ 0.19
HDAC6-201ENST00000334136 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
HDAC6-201ENST00000334136 C9orf84Q5VXU9 1444 aa16.25■□□□□ 0.19
HDAC6-201ENST00000334136 ANKRD50Q9ULJ7 1429 aa16.25■□□□□ 0.19
HDAC6-201ENST00000334136 CLSPNQ9HAW4 1339 aa16.24■□□□□ 0.19
HDAC6-201ENST00000334136 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
HDAC6-201ENST00000334136 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-201ENST00000334136 PLCH2O75038 1416 aa16.23■□□□□ 0.19
HDAC6-201ENST00000334136 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
HDAC6-201ENST00000334136 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
HDAC6-201ENST00000334136 AKNAQ7Z591 1439 aa16.21■□□□□ 0.19
HDAC6-201ENST00000334136 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
HDAC6-201ENST00000334136 DAPK1P53355 1430 aa16.21■□□□□ 0.18
HDAC6-201ENST00000334136 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.18
HDAC6-201ENST00000334136 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
HDAC6-201ENST00000334136 UHRF1BP1LA0JNW5 1464 aa16.2■□□□□ 0.18
HDAC6-201ENST00000334136 DAXXQ9UER7 740 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-201ENST00000334136 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
HDAC6-201ENST00000334136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDAC6-201ENST00000334136 ABCA8O94911 1581 aa16.19■□□□□ 0.18
HDAC6-201ENST00000334136 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-201ENST00000334136 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
HDAC6-201ENST00000334136 KDM5BQ9UGL1 1544 aa16.16■□□□□ 0.18
HDAC6-201ENST00000334136 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
HDAC6-201ENST00000334136 ABCC5O15440 1437 aa16.14■□□□□ 0.17
HDAC6-201ENST00000334136 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
HDAC6-201ENST00000334136 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.172e-9■■■■■ 73
HDAC6-201ENST00000334136 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
HDAC6-201ENST00000334136 HIRIP3Q9BW71 556 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-201ENST00000334136 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
HDAC6-201ENST00000334136 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
HDAC6-201ENST00000334136 ROCK1Q13464 1354 aa16.08■□□□□ 0.17
HDAC6-201ENST00000334136 HFM1A2PYH4 1435 aa16.08■□□□□ 0.17
HDAC6-201ENST00000334136 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.17
HDAC6-201ENST00000334136 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.17
HDAC6-201ENST00000334136 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.16
HDAC6-201ENST00000334136 EID1Q9Y6B2 187 aa16.07■□□□□ 0.16
HDAC6-201ENST00000334136 ITSN2Q9NZM3 1697 aa16.07■□□□□ 0.16
HDAC6-201ENST00000334136 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
HDAC6-201ENST00000334136 NUTM2DQ5VT03 806 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-201ENST00000334136 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
HDAC6-201ENST00000334136 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
HDAC6-201ENST00000334136 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
HDAC6-201ENST00000334136 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
HDAC6-201ENST00000334136 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-201ENST00000334136 TRAPPC8Q9Y2L5 1435 aa16.05■□□□□ 0.16
HDAC6-201ENST00000334136 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
HDAC6-201ENST00000334136 POGKQ9P215 609 aa16.05■□□□□ 0.16
HDAC6-201ENST00000334136 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-201ENST00000334136 NAIPQ13075 1403 aa16.04■□□□□ 0.16
HDAC6-201ENST00000334136 SYCP2Q9BX26 1530 aa16.04■□□□□ 0.16
HDAC6-201ENST00000334136 ZCCHC11Q5TAX3 1644 aaKnown RBP16.04■□□□□ 0.16
HDAC6-201ENST00000334136 MAGI3Q5TCQ9 1506 aa16.04■□□□□ 0.16
HDAC6-201ENST00000334136 ZNF518AQ6AHZ1 1483 aa16.03■□□□□ 0.16
HDAC6-201ENST00000334136 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
HDAC6-201ENST00000334136 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
HDAC6-201ENST00000334136 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
HDAC6-201ENST00000334136 STK26Q9P289 416 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms