RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 ARHGEF40Q8TER5 1519 aa17.61■□□□□ 0.41
APOBEC3B-201ENST00000333467 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
APOBEC3B-201ENST00000333467 CDC42BPBQ9Y5S2 1711 aa17.59■□□□□ 0.41
APOBEC3B-201ENST00000333467 PREX2Q70Z35 1606 aa17.59■□□□□ 0.41
APOBEC3B-201ENST00000333467 ZMYM4Q5VZL5 1548 aa17.58■□□□□ 0.4
APOBEC3B-201ENST00000333467 AKNAQ7Z591 1439 aa17.58■□□□□ 0.4
APOBEC3B-201ENST00000333467 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
APOBEC3B-201ENST00000333467 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
APOBEC3B-201ENST00000333467 PLCH2O75038 1416 aa17.56■□□□□ 0.4
APOBEC3B-201ENST00000333467 RAPGEF3O95398 923 aa17.55■□□□□ 0.4
APOBEC3B-201ENST00000333467 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
APOBEC3B-201ENST00000333467 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
APOBEC3B-201ENST00000333467 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
APOBEC3B-201ENST00000333467 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
APOBEC3B-201ENST00000333467 SIGLEC1Q9BZZ2 1709 aa17.52■□□□□ 0.4
APOBEC3B-201ENST00000333467 POGZQ7Z3K3 1410 aa17.51■□□□□ 0.39
APOBEC3B-201ENST00000333467 ZFYVE16Q7Z3T8 1539 aa17.51■□□□□ 0.39
APOBEC3B-201ENST00000333467 ADAMTSL3P82987 1691 aa17.51■□□□□ 0.39
APOBEC3B-201ENST00000333467 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
APOBEC3B-201ENST00000333467 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
APOBEC3B-201ENST00000333467 ABCC1P33527 1531 aa17.48■□□□□ 0.39
APOBEC3B-201ENST00000333467 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
APOBEC3B-201ENST00000333467 KDM5CP41229 1560 aa17.47■□□□□ 0.39
APOBEC3B-201ENST00000333467 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
APOBEC3B-201ENST00000333467 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.38
APOBEC3B-201ENST00000333467 MAGI2Q86UL8 1455 aa17.45■□□□□ 0.38
APOBEC3B-201ENST00000333467 YEATS2Q9ULM3 1422 aa17.44■□□□□ 0.38
APOBEC3B-201ENST00000333467 HRCP23327 699 aa17.44■□□□□ 0.38
APOBEC3B-201ENST00000333467 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
APOBEC3B-201ENST00000333467 ZNF518AQ6AHZ1 1483 aa17.43■□□□□ 0.38
APOBEC3B-201ENST00000333467 RIMS1Q86UR5 1692 aaKnown RBP17.43■□□□□ 0.38
APOBEC3B-201ENST00000333467 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
APOBEC3B-201ENST00000333467 FER1L4A9Z1Z3 1794 aa17.42■□□□□ 0.38
APOBEC3B-201ENST00000333467 EFCAB2Q5VUJ9 269 aa17.42■□□□□ 0.38
APOBEC3B-201ENST00000333467 ABCA6Q8N139 1617 aa17.41■□□□□ 0.38
APOBEC3B-201ENST00000333467 DIP2CQ9Y2E4 1556 aa17.39■□□□□ 0.38
APOBEC3B-201ENST00000333467 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
APOBEC3B-201ENST00000333467 ARHGEF12Q9NZN5 1544 aa17.38■□□□□ 0.37
APOBEC3B-201ENST00000333467 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
APOBEC3B-201ENST00000333467 PTPRMP28827 1452 aa17.37■□□□□ 0.37
APOBEC3B-201ENST00000333467 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
APOBEC3B-201ENST00000333467 GPATCH8Q9UKJ3 1502 aaKnown RBP17.36■□□□□ 0.37
APOBEC3B-201ENST00000333467 KIDINS220Q9ULH0 1771 aa17.36■□□□□ 0.37
APOBEC3B-201ENST00000333467 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
APOBEC3B-201ENST00000333467 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
APOBEC3B-201ENST00000333467 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
APOBEC3B-201ENST00000333467 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
APOBEC3B-201ENST00000333467 VPS8Q8N3P4 1428 aa17.33■□□□□ 0.37
APOBEC3B-201ENST00000333467 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.37
APOBEC3B-201ENST00000333467 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.37
APOBEC3B-201ENST00000333467 ATP10AO60312 1499 aa17.33■□□□□ 0.36
APOBEC3B-201ENST00000333467 MLH3Q9UHC1 1453 aa17.32■□□□□ 0.36
APOBEC3B-201ENST00000333467 INO80Q9ULG1 1556 aaPredicted RBP17.31■□□□□ 0.36
APOBEC3B-201ENST00000333467 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
APOBEC3B-201ENST00000333467 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
APOBEC3B-201ENST00000333467 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.36
APOBEC3B-201ENST00000333467 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
APOBEC3B-201ENST00000333467 ATP7AQ04656 1500 aa17.27■□□□□ 0.35
APOBEC3B-201ENST00000333467 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
APOBEC3B-201ENST00000333467 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
APOBEC3B-201ENST00000333467 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
APOBEC3B-201ENST00000333467 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
APOBEC3B-201ENST00000333467 ADGBQ8N7X0 1667 aa17.23■□□□□ 0.35
APOBEC3B-201ENST00000333467 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
APOBEC3B-201ENST00000333467 AGLP35573 1532 aa17.23■□□□□ 0.35
APOBEC3B-201ENST00000333467 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
APOBEC3B-201ENST00000333467 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
APOBEC3B-201ENST00000333467 MYT1LQ9UL68 1186 aa17.22■□□□□ 0.35
APOBEC3B-201ENST00000333467 PLXNC1O60486 1568 aa17.22■□□□□ 0.35
APOBEC3B-201ENST00000333467 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
APOBEC3B-201ENST00000333467 MLECQ14165 292 aa17.21■□□□□ 0.35
APOBEC3B-201ENST00000333467 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
APOBEC3B-201ENST00000333467 C3P01024 1663 aa17.2■□□□□ 0.34
APOBEC3B-201ENST00000333467 PREX1Q8TCU6 1659 aa17.2■□□□□ 0.34
APOBEC3B-201ENST00000333467 LMTK3Q96Q04 1460 aa17.2■□□□□ 0.34
APOBEC3B-201ENST00000333467 HNRNPMP52272 730 aaKnown RBP eCLIP17.17■□□□□ 0.34
APOBEC3B-201ENST00000333467 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
APOBEC3B-201ENST00000333467 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
APOBEC3B-201ENST00000333467 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
APOBEC3B-201ENST00000333467 ZNF644Q9H582 1327 aaPredicted RBP17.15■□□□□ 0.34
APOBEC3B-201ENST00000333467 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
APOBEC3B-201ENST00000333467 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
APOBEC3B-201ENST00000333467 CLTCQ00610 1675 aaKnown RBP17.13■□□□□ 0.33
APOBEC3B-201ENST00000333467 A2MP01023 1474 aa17.13■□□□□ 0.33
APOBEC3B-201ENST00000333467 CROCC2H7BZ55 1655 aa17.11■□□□□ 0.33
APOBEC3B-201ENST00000333467 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
APOBEC3B-201ENST00000333467 MYOM3Q5VTT5 1437 aa17.09■□□□□ 0.33
APOBEC3B-201ENST00000333467 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
APOBEC3B-201ENST00000333467 MAST1Q9Y2H9 1570 aa17.08■□□□□ 0.32
APOBEC3B-201ENST00000333467 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
APOBEC3B-201ENST00000333467 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
APOBEC3B-201ENST00000333467 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
APOBEC3B-201ENST00000333467 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
APOBEC3B-201ENST00000333467 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
APOBEC3B-201ENST00000333467 MYO3AQ8NEV4 1616 aa17.02■□□□□ 0.32
APOBEC3B-201ENST00000333467 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
APOBEC3B-201ENST00000333467 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
APOBEC3B-201ENST00000333467 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
APOBEC3B-201ENST00000333467 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3B-201ENST00000333467 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms