RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 CCDC70Q6NSX1 233 aa16.81■□□□□ 0.28
BRWD1-201ENST00000333229 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
BRWD1-201ENST00000333229 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
BRWD1-201ENST00000333229 TPM3P06753 285 aa16.8■□□□□ 0.28
BRWD1-201ENST00000333229 CWC15Q9P013 229 aaKnown RBP16.79■□□□□ 0.28
BRWD1-201ENST00000333229 MAP7D2Q96T17 732 aa16.79■□□□□ 0.28
BRWD1-201ENST00000333229 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
BRWD1-201ENST00000333229 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRWD1-201ENST00000333229 SPRYD3Q8NCJ5 442 aa16.78■□□□□ 0.28
BRWD1-201ENST00000333229 CCDC191Q8NCU4 936 aa16.78■□□□□ 0.28
BRWD1-201ENST00000333229 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
BRWD1-201ENST00000333229 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.28
BRWD1-201ENST00000333229 POGKQ9P215 609 aa16.75■□□□□ 0.27
BRWD1-201ENST00000333229 CCDC34Q96HJ3 373 aa16.74■□□□□ 0.27
BRWD1-201ENST00000333229 CCDC66A2RUB6 948 aa16.74■□□□□ 0.27
BRWD1-201ENST00000333229 RBM19Q9Y4C8 960 aaKnown RBP16.74■□□□□ 0.27
BRWD1-201ENST00000333229 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
BRWD1-201ENST00000333229 SOX12O15370 315 aa16.73■□□□□ 0.27
BRWD1-201ENST00000333229 MS4A1P11836 297 aa16.73■□□□□ 0.27
BRWD1-201ENST00000333229 CSPP1Q1MSJ5 1256 aa16.72■□□□□ 0.27
BRWD1-201ENST00000333229 MTERF4Q7Z6M4 381 aaKnown RBP16.72■□□□□ 0.27
BRWD1-201ENST00000333229 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
BRWD1-201ENST00000333229 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
BRWD1-201ENST00000333229 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
BRWD1-201ENST00000333229 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
BRWD1-201ENST00000333229 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
BRWD1-201ENST00000333229 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
BRWD1-201ENST00000333229 AK7Q96M32 723 aa16.66■□□□□ 0.26
BRWD1-201ENST00000333229 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
BRWD1-201ENST00000333229 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
BRWD1-201ENST00000333229 APBB1O00213 710 aa16.65■□□□□ 0.26
BRWD1-201ENST00000333229 CCAR2Q8N163 923 aaKnown RBP16.65■□□□□ 0.26
BRWD1-201ENST00000333229 FAM13BQ9NYF5 915 aa16.65■□□□□ 0.26
BRWD1-201ENST00000333229 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
BRWD1-201ENST00000333229 DCTN1Q14203 1278 aa16.65■□□□□ 0.26
BRWD1-201ENST00000333229 H0YHG0 523 aa16.64■□□□□ 0.25
BRWD1-201ENST00000333229 CDR1P51861 262 aa16.64■□□□□ 0.25
BRWD1-201ENST00000333229 ACBD3Q9H3P7 528 aa16.63■□□□□ 0.25
BRWD1-201ENST00000333229 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
BRWD1-201ENST00000333229 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
BRWD1-201ENST00000333229 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
BRWD1-201ENST00000333229 CARD11Q9BXL7 1154 aa16.6■□□□□ 0.25
BRWD1-201ENST00000333229 DYDC1Q8WWB3 177 aa16.6■□□□□ 0.25
BRWD1-201ENST00000333229 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
BRWD1-201ENST00000333229 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
BRWD1-201ENST00000333229 HSP90AB3PQ58FF7 597 aa16.59■□□□□ 0.25
BRWD1-201ENST00000333229 RUFY1Q96T51 708 aa16.59■□□□□ 0.25
BRWD1-201ENST00000333229 ARGLU1Q9NWB6 273 aaPredicted RBP16.59■□□□□ 0.25
BRWD1-201ENST00000333229 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
BRWD1-201ENST00000333229 B4GALNT3Q6L9W6 998 aa16.58■□□□□ 0.25
BRWD1-201ENST00000333229 KIAA1211Q6ZU35 1233 aa16.58■□□□□ 0.24
BRWD1-201ENST00000333229 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
BRWD1-201ENST00000333229 TAF3Q5VWG9 929 aa16.58■□□□□ 0.24
BRWD1-201ENST00000333229 IPO9Q96P70 1041 aaKnown RBP16.57■□□□□ 0.24
BRWD1-201ENST00000333229 HSP90B2PQ58FF3 399 aa16.57■□□□□ 0.24
BRWD1-201ENST00000333229 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
BRWD1-201ENST00000333229 TPM1P09493 284 aa16.55■□□□□ 0.24
BRWD1-201ENST00000333229 INCENPQ9NQS7 918 aa16.55■□□□□ 0.24
BRWD1-201ENST00000333229 PLCD4Q9BRC7 762 aa16.55■□□□□ 0.24
BRWD1-201ENST00000333229 CLIP1P30622 1438 aa16.55■□□□□ 0.24
BRWD1-201ENST00000333229 NEXNQ0ZGT2 675 aa16.55■□□□□ 0.24
BRWD1-201ENST00000333229 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
BRWD1-201ENST00000333229 CREBRFQ8IUR6 639 aa16.54■□□□□ 0.24
BRWD1-201ENST00000333229 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
BRWD1-201ENST00000333229 VPS53Q5VIR6 699 aa16.52■□□□□ 0.24
BRWD1-201ENST00000333229 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.24
BRWD1-201ENST00000333229 GSE1Q14687 1217 aa16.52■□□□□ 0.24
BRWD1-201ENST00000333229 ZRSR2Q15696 482 aaKnown RBP16.52■□□□□ 0.23
BRWD1-201ENST00000333229 ZNF592Q92610 1267 aa16.51■□□□□ 0.23
BRWD1-201ENST00000333229 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
BRWD1-201ENST00000333229 MLECQ14165 292 aa16.51■□□□□ 0.23
BRWD1-201ENST00000333229 SKOR2Q2VWA4 1001 aaPredicted RBP16.5■□□□□ 0.23
BRWD1-201ENST00000333229 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
BRWD1-201ENST00000333229 TMX4Q9H1E5 349 aaPredicted RBP16.5■□□□□ 0.23
BRWD1-201ENST00000333229 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
BRWD1-201ENST00000333229 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
BRWD1-201ENST00000333229 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
BRWD1-201ENST00000333229 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
BRWD1-201ENST00000333229 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
BRWD1-201ENST00000333229 USP8P40818 1118 aa16.48■□□□□ 0.23
BRWD1-201ENST00000333229 LEKR1Q6ZMV7 388 aa16.48■□□□□ 0.23
BRWD1-201ENST00000333229 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
BRWD1-201ENST00000333229 DEF6Q9H4E7 631 aa16.48■□□□□ 0.23
BRWD1-201ENST00000333229 TPM2P07951 284 aa16.47■□□□□ 0.23
BRWD1-201ENST00000333229 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
BRWD1-201ENST00000333229 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
BRWD1-201ENST00000333229 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
BRWD1-201ENST00000333229 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.22
BRWD1-201ENST00000333229 GORABQ5T7V8 394 aa16.45■□□□□ 0.22
BRWD1-201ENST00000333229 IPO7O95373 1038 aaKnown RBP16.45■□□□□ 0.22
BRWD1-201ENST00000333229 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
BRWD1-201ENST00000333229 G3V3G9 751 aa16.43■□□□□ 0.22
BRWD1-201ENST00000333229 TPD52L1Q16890 204 aaPredicted RBP16.43■□□□□ 0.22
BRWD1-201ENST00000333229 DCAF8Q5TAQ9 597 aa16.43■□□□□ 0.22
BRWD1-201ENST00000333229 GOLGA6L7A0A1B0GV03 622 aa16.43■□□□□ 0.22
BRWD1-201ENST00000333229 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
BRWD1-201ENST00000333229 KRI1Q8N9T8 703 aaKnown RBP16.43■□□□□ 0.22
BRWD1-201ENST00000333229 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
BRWD1-201ENST00000333229 NOL8Q76FK4 1167 aaKnown RBP16.42■□□□□ 0.22
BRWD1-201ENST00000333229 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms