RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 APLP2Q06481 763 aa32.92■■■□□ 2.86
YBX1-202ENST00000332220 ITSN2Q9NZM3 1697 aa32.91■■■□□ 2.86
YBX1-202ENST00000332220 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
YBX1-202ENST00000332220 GPATCH8Q9UKJ3 1502 aaKnown RBP32.91■■■□□ 2.86
YBX1-202ENST00000332220 AKNAQ7Z591 1439 aa32.89■■■□□ 2.86
YBX1-202ENST00000332220 PHLDB1Q86UU1 1377 aa32.89■■■□□ 2.86
YBX1-202ENST00000332220 RICTORQ6R327 1708 aa32.86■■■□□ 2.85
YBX1-202ENST00000332220 CCNB3Q8WWL7 1395 aa32.85■■■□□ 2.85
YBX1-202ENST00000332220 EFCAB2Q5VUJ9 269 aa32.84■■■□□ 2.85
YBX1-202ENST00000332220 FRMPD1Q5SYB0 1578 aa32.83■■■□□ 2.85
YBX1-202ENST00000332220 ADGRL1O94910 1474 aa32.81■■■□□ 2.84
YBX1-202ENST00000332220 SAMD9LQ8IVG5 1584 aa32.8■■■□□ 2.84
YBX1-202ENST00000332220 ABCC1P33527 1531 aa32.77■■■□□ 2.84
YBX1-202ENST00000332220 DENND4BO75064 1496 aaPredicted RBP32.75■■■□□ 2.83
YBX1-202ENST00000332220 SCAPERQ9BY12 1400 aa32.75■■■□□ 2.83
YBX1-202ENST00000332220 RAPGEF3O95398 923 aa32.73■■■□□ 2.83
YBX1-202ENST00000332220 CFDP1Q9UEE9 299 aaPredicted RBP32.72■■■□□ 2.83
YBX1-202ENST00000332220 ARHGEF12Q9NZN5 1544 aa32.7■■■□□ 2.83
YBX1-202ENST00000332220 ZNF777Q9ULD5 760 aaPredicted RBP32.69■■■□□ 2.82
YBX1-202ENST00000332220 POGZQ7Z3K3 1410 aa32.68■■■□□ 2.82
YBX1-202ENST00000332220 SYCP2Q9BX26 1530 aa32.67■■■□□ 2.82
YBX1-202ENST00000332220 MYOM3Q5VTT5 1437 aa32.65■■■□□ 2.82
YBX1-202ENST00000332220 ZMYM4Q5VZL5 1548 aa32.65■■■□□ 2.82
YBX1-202ENST00000332220 ZNF644Q9H582 1327 aaPredicted RBP32.62■■■□□ 2.81
YBX1-202ENST00000332220 KDM5CP41229 1560 aa32.62■■■□□ 2.81
YBX1-202ENST00000332220 CAMSAP2Q08AD1 1489 aa32.61■■■□□ 2.81
YBX1-202ENST00000332220 ZNF518AQ6AHZ1 1483 aa32.61■■■□□ 2.81
YBX1-202ENST00000332220 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
YBX1-202ENST00000332220 TRAPPC8Q9Y2L5 1435 aa32.6■■■□□ 2.81
YBX1-202ENST00000332220 PPARGC1BQ86YN6 1023 aaKnown RBP32.57■■■□□ 2.8
YBX1-202ENST00000332220 KIAA1107Q9UPP5 1409 aa32.57■■■□□ 2.8
YBX1-202ENST00000332220 MIA2Q96PC5 1412 aa32.55■■■□□ 2.8
YBX1-202ENST00000332220 ARHGEF40Q8TER5 1519 aa32.55■■■□□ 2.8
YBX1-202ENST00000332220 HECW2Q9P2P5 1572 aa32.54■■■□□ 2.8
YBX1-202ENST00000332220 HNRNPMP52272 730 aaKnown RBP eCLIP32.54■■■□□ 2.89e-7■■■■□ 23.6
YBX1-202ENST00000332220 AFAP1Q8N556 730 aa32.54■■■□□ 2.8
YBX1-202ENST00000332220 PTPN23Q9H3S7 1636 aa32.54■■■□□ 2.8
YBX1-202ENST00000332220 MBD5Q9P267 1494 aa32.52■■■□□ 2.8
YBX1-202ENST00000332220 ZFYVE16Q7Z3T8 1539 aa32.51■■■□□ 2.8
YBX1-202ENST00000332220 KIDINS220Q9ULH0 1771 aa32.51■■■□□ 2.79
YBX1-202ENST00000332220 FGD6Q6ZV73 1430 aa32.5■■■□□ 2.79
YBX1-202ENST00000332220 MAGI2Q86UL8 1455 aa32.49■■■□□ 2.79
YBX1-202ENST00000332220 YEATS2Q9ULM3 1422 aa32.49■■■□□ 2.79
YBX1-202ENST00000332220 ARHGEF5Q12774 1597 aa32.47■■■□□ 2.79
YBX1-202ENST00000332220 INO80Q9ULG1 1556 aaPredicted RBP32.45■■■□□ 2.79
YBX1-202ENST00000332220 ABCA6Q8N139 1617 aa32.45■■■□□ 2.79
YBX1-202ENST00000332220 MLH3Q9UHC1 1453 aa32.45■■■□□ 2.79
YBX1-202ENST00000332220 SIGLEC1Q9BZZ2 1709 aa32.43■■■□□ 2.78
YBX1-202ENST00000332220 TCOF1Q13428 1488 aaKnown RBP32.43■■■□□ 2.78
YBX1-202ENST00000332220 DIP2CQ9Y2E4 1556 aa32.42■■■□□ 2.78
YBX1-202ENST00000332220 CCDC141Q6ZP82 1450 aa32.42■■■□□ 2.78
YBX1-202ENST00000332220 ATP7AQ04656 1500 aa32.4■■■□□ 2.78
YBX1-202ENST00000332220 CROCC2H7BZ55 1655 aa32.39■■■□□ 2.78
YBX1-202ENST00000332220 SPAG9O60271 1321 aaKnown RBP32.36■■■□□ 2.77
YBX1-202ENST00000332220 MYT1LQ9UL68 1186 aa32.35■■■□□ 2.77
YBX1-202ENST00000332220 DNMT1P26358 1616 aaKnown RBP32.35■■■□□ 2.77
YBX1-202ENST00000332220 ATP10AO60312 1499 aa32.34■■■□□ 2.77
YBX1-202ENST00000332220 ADGBQ8N7X0 1667 aa32.32■■■□□ 2.76
YBX1-202ENST00000332220 MAST1Q9Y2H9 1570 aa32.31■■■□□ 2.76
YBX1-202ENST00000332220 RSPH4AQ5TD94 716 aa32.3■■■□□ 2.76
YBX1-202ENST00000332220 REREQ9P2R6 1566 aa32.29■■■□□ 2.76
YBX1-202ENST00000332220 C9orf84Q5VXU9 1444 aa32.29■■■□□ 2.76
YBX1-202ENST00000332220 RTEL1-TNFRSF6BF6WH68 1400 aa32.27■■■□□ 2.76
YBX1-202ENST00000332220 BCORL1Q5H9F3 1711 aa32.26■■■□□ 2.75
YBX1-202ENST00000332220 ABCC5O15440 1437 aa32.26■■■□□ 2.75
YBX1-202ENST00000332220 DAPK1P53355 1430 aa32.25■■■□□ 2.75
YBX1-202ENST00000332220 FAM50AQ14320 339 aaKnown RBP32.24■■■□□ 2.75
YBX1-202ENST00000332220 SHANK2Q9UPX8 1470 aa32.21■■■□□ 2.75
YBX1-202ENST00000332220 TSPY4P0CV99 314 aa32.2■■■□□ 2.75
YBX1-202ENST00000332220 TSPY10P0CW01 314 aa32.2■■■□□ 2.75
YBX1-202ENST00000332220 PLXNC1O60486 1568 aa32.19■■■□□ 2.74
YBX1-202ENST00000332220 ARID4BQ4LE39 1312 aaPredicted RBP32.18■■■□□ 2.74
YBX1-202ENST00000332220 ADAMTSL3P82987 1691 aa32.18■■■□□ 2.74
YBX1-202ENST00000332220 RRBP1Q9P2E9 1410 aaKnown RBP32.17■■■□□ 2.74
YBX1-202ENST00000332220 A2MP01023 1474 aa32.16■■■□□ 2.74
YBX1-202ENST00000332220 AGLP35573 1532 aa32.15■■■□□ 2.74
YBX1-202ENST00000332220 KDM4FA0A1W2PPD8 638 aa32.14■■■□□ 2.74
YBX1-202ENST00000332220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.12■■■□□ 2.73
YBX1-202ENST00000332220 MADDQ8WXG6 1647 aa32.11■■■□□ 2.73
YBX1-202ENST00000332220 FER1L4A9Z1Z3 1794 aa32.1■■■□□ 2.73
YBX1-202ENST00000332220 PTPRKQ15262 1439 aa32.08■■■□□ 2.73
YBX1-202ENST00000332220 CHIC2Q9UKJ5 165 aa32.06■■■□□ 2.72
YBX1-202ENST00000332220 DHX29Q7Z478 1369 aaKnown RBP32.06■■■□□ 2.72
YBX1-202ENST00000332220 RIMS1Q86UR5 1692 aaKnown RBP32.05■■■□□ 2.72
YBX1-202ENST00000332220 ADGRL2O95490 1459 aa32.04■■■□□ 2.72
YBX1-202ENST00000332220 MLECQ14165 292 aa32.04■■■□□ 2.72
YBX1-202ENST00000332220 DUOX2Q9NRD8 1548 aa32.01■■■□□ 2.72
YBX1-202ENST00000332220 KIF15Q9NS87 1388 aa32■■■□□ 2.71
YBX1-202ENST00000332220 EIF2AK4Q9P2K8 1649 aaKnown RBP32■■■□□ 2.71
YBX1-202ENST00000332220 NCOA1Q15788 1441 aa31.99■■■□□ 2.71
YBX1-202ENST00000332220 ANKRD30AQ9BXX3 1397 aa31.98■■■□□ 2.71
YBX1-202ENST00000332220 ITGAEP38570 1179 aa31.98■■■□□ 2.71
YBX1-202ENST00000332220 RRP7BPQ9NSQ0 103 aa31.97■■■□□ 2.71
YBX1-202ENST00000332220 RNF17Q9BXT8 1623 aaKnown RBP31.93■■■□□ 2.7
YBX1-202ENST00000332220 CLTCQ00610 1675 aaKnown RBP31.9■■■□□ 2.7
YBX1-202ENST00000332220 KIF3BO15066 747 aa31.9■■■□□ 2.7
YBX1-202ENST00000332220 ERBINQ96RT1 1412 aa31.89■■■□□ 2.7
YBX1-202ENST00000332220 ROCK1Q13464 1354 aa31.88■■■□□ 2.69
YBX1-202ENST00000332220 PTPRMP28827 1452 aa31.88■■■□□ 2.69
YBX1-202ENST00000332220 MROH1Q8NDA8 1641 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms