RNA–Protein interactions for RNA: ENST00000332029.2

SOCS1-201, Transcript of suppressor of cytokine signaling 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS1, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS1-201ENST00000332029 RIMS1Q86UR5 1692 aaKnown RBP34.64■■■■□ 3.14
SOCS1-201ENST00000332029 EFCAB2Q5VUJ9 269 aa34.63■■■■□ 3.13
SOCS1-201ENST00000332029 TROQ12816 1431 aaPredicted RBP34.62■■■■□ 3.13
SOCS1-201ENST00000332029 PCF11O94913 1555 aaKnown RBP34.62■■■■□ 3.13
SOCS1-201ENST00000332029 MYO5CQ9NQX4 1742 aa34.61■■■■□ 3.13
SOCS1-201ENST00000332029 KIF14Q15058 1648 aa34.6■■■■□ 3.13
SOCS1-201ENST00000332029 SIGLEC1Q9BZZ2 1709 aa34.59■■■■□ 3.13
SOCS1-201ENST00000332029 LMTK3Q96Q04 1460 aa34.58■■■■□ 3.13
SOCS1-201ENST00000332029 CLIP1P30622 1438 aa34.58■■■■□ 3.13
SOCS1-201ENST00000332029 MLECQ14165 292 aa34.53■■■■□ 3.12
SOCS1-201ENST00000332029 ARHGAP5Q13017 1502 aa34.52■■■■□ 3.12
SOCS1-201ENST00000332029 ATP10AO60312 1499 aa34.52■■■■□ 3.12
SOCS1-201ENST00000332029 PLPPR3Q6T4P5 718 aa34.51■■■■□ 3.12
SOCS1-201ENST00000332029 LRRIQ1Q96JM4 1722 aa34.5■■■■□ 3.11
SOCS1-201ENST00000332029 C9orf84Q5VXU9 1444 aa34.49■■■■□ 3.11
SOCS1-201ENST00000332029 ZNF518AQ6AHZ1 1483 aa34.49■■■■□ 3.11
SOCS1-201ENST00000332029 CASKIN1Q8WXD9 1431 aa34.47■■■■□ 3.11
SOCS1-201ENST00000332029 CCDC18Q5T9S5 1454 aa34.44■■■■□ 3.1
SOCS1-201ENST00000332029 FER1L4A9Z1Z3 1794 aa34.42■■■■□ 3.1
SOCS1-201ENST00000332029 AFAP1Q8N556 730 aa34.42■■■■□ 3.1
SOCS1-201ENST00000332029 KDM5CP41229 1560 aa34.41■■■■□ 3.1
SOCS1-201ENST00000332029 ARHGEF12Q9NZN5 1544 aa34.41■■■■□ 3.1
SOCS1-201ENST00000332029 HSPA2P54652 639 aa34.39■■■■□ 3.1
SOCS1-201ENST00000332029 FBXO41Q8TF61 875 aa34.38■■■■□ 3.09
SOCS1-201ENST00000332029 MYT1LQ9UL68 1186 aa34.35■■■■□ 3.09
SOCS1-201ENST00000332029 CDC42BPBQ9Y5S2 1711 aa34.35■■■■□ 3.09
SOCS1-201ENST00000332029 PREX2Q70Z35 1606 aa34.33■■■■□ 3.09
SOCS1-201ENST00000332029 FYCO1Q9BQS8 1478 aa34.32■■■■□ 3.08
SOCS1-201ENST00000332029 DIP2CQ9Y2E4 1556 aa34.3■■■■□ 3.08
SOCS1-201ENST00000332029 ABCC1P33527 1531 aa34.3■■■■□ 3.08
SOCS1-201ENST00000332029 MLH3Q9UHC1 1453 aa34.29■■■■□ 3.08
SOCS1-201ENST00000332029 TRAPPC8Q9Y2L5 1435 aa34.28■■■■□ 3.08
SOCS1-201ENST00000332029 REREQ9P2R6 1566 aa34.25■■■■□ 3.07
SOCS1-201ENST00000332029 CEBPAP49715 358 aaPredicted RBP34.24■■■■□ 3.07
SOCS1-201ENST00000332029 ABCA6Q8N139 1617 aa34.23■■■■□ 3.07
SOCS1-201ENST00000332029 ITSN2Q9NZM3 1697 aa34.21■■■■□ 3.07
SOCS1-201ENST00000332029 CDC42BPAQ5VT25 1732 aa34.18■■■■□ 3.06
SOCS1-201ENST00000332029 PREX1Q8TCU6 1659 aa34.16■■■■□ 3.06
SOCS1-201ENST00000332029 AGLP35573 1532 aa34.15■■■■□ 3.06
SOCS1-201ENST00000332029 ZNF777Q9ULD5 760 aaPredicted RBP34.13■■■■□ 3.05
SOCS1-201ENST00000332029 GPATCH8Q9UKJ3 1502 aaKnown RBP34.11■■■■□ 3.05
SOCS1-201ENST00000332029 KIDINS220Q9ULH0 1771 aa34.11■■■■□ 3.05
SOCS1-201ENST00000332029 SAMD9LQ8IVG5 1584 aa34.09■■■■□ 3.05
SOCS1-201ENST00000332029 UHRF1BP1Q6BDS2 1440 aa34.08■■■■□ 3.05
SOCS1-201ENST00000332029 ESF1Q9H501 851 aaKnown RBP34.08■■■■□ 3.05
SOCS1-201ENST00000332029 SYCP2Q9BX26 1530 aa34.07■■■■□ 3.04
SOCS1-201ENST00000332029 HNRNPMP52272 730 aaKnown RBP eCLIP34.02■■■■□ 3.04
SOCS1-201ENST00000332029 SPAG9O60271 1321 aaKnown RBP34.02■■■■□ 3.04
SOCS1-201ENST00000332029 CCNB3Q8WWL7 1395 aa34.01■■■■□ 3.04
SOCS1-201ENST00000332029 C3P01024 1663 aa34.01■■■■□ 3.04
SOCS1-201ENST00000332029 CERKQ8TCT0 537 aa34.01■■■■□ 3.03
SOCS1-201ENST00000332029 CFDP1Q9UEE9 299 aaPredicted RBP34.01■■■■□ 3.03
SOCS1-201ENST00000332029 MTUS2Q5JR59 1369 aa34■■■■□ 3.03
SOCS1-201ENST00000332029 CNTLNQ9NXG0 1405 aa33.99■■■■□ 3.03
SOCS1-201ENST00000332029 KIAA1107Q9UPP5 1409 aa33.99■■■■□ 3.03
SOCS1-201ENST00000332029 PLEKHH2Q8IVE3 1493 aa33.98■■■■□ 3.03
SOCS1-201ENST00000332029 SETD1BQ9UPS6 1966 aaKnown RBP33.98■■■■□ 3.03
SOCS1-201ENST00000332029 DMRT2Q9Y5R5 561 aa33.96■■■■□ 3.03
SOCS1-201ENST00000332029 ATP7AQ04656 1500 aa33.93■■■■□ 3.02
SOCS1-201ENST00000332029 STRCQ7RTU9 1775 aa33.93■■■■□ 3.02
SOCS1-201ENST00000332029 INO80Q9ULG1 1556 aaPredicted RBP33.89■■■■□ 3.02
SOCS1-201ENST00000332029 EHBP1L1Q8N3D4 1523 aa33.87■■■■□ 3.01
SOCS1-201ENST00000332029 A2MP01023 1474 aa33.86■■■■□ 3.01
SOCS1-201ENST00000332029 CEP162Q5TB80 1403 aa33.85■■■■□ 3.01
SOCS1-201ENST00000332029 PLXNC1O60486 1568 aa33.85■■■■□ 3.01
SOCS1-201ENST00000332029 TIAM1Q13009 1591 aa33.85■■■■□ 3.01
SOCS1-201ENST00000332029 SUPT6HQ7KZ85 1726 aaKnown RBP33.84■■■■□ 3.01
SOCS1-201ENST00000332029 MROH2AA6NES4 1674 aa33.83■■■■□ 3.01
SOCS1-201ENST00000332029 NPATQ14207 1427 aa33.82■■■■□ 3
SOCS1-201ENST00000332029 ZMYM3Q14202 1370 aa33.82■■■■□ 3
SOCS1-201ENST00000332029 ZNF644Q9H582 1327 aaPredicted RBP33.81■■■■□ 3
SOCS1-201ENST00000332029 PTPRTO14522 1441 aa33.8■■■■□ 3
SOCS1-201ENST00000332029 MBD5Q9P267 1494 aa33.76■■■■□ 3
SOCS1-201ENST00000332029 NCOA1Q15788 1441 aa33.76■■■□□ 2.99
SOCS1-201ENST00000332029 GGT6Q6P531 493 aa33.74■■■□□ 2.99
SOCS1-201ENST00000332029 CLTCQ00610 1675 aaKnown RBP33.72■■■□□ 2.99
SOCS1-201ENST00000332029 ADGBQ8N7X0 1667 aa33.71■■■□□ 2.99
SOCS1-201ENST00000332029 RTEL1-TNFRSF6BF6WH68 1400 aa33.7■■■□□ 2.98
SOCS1-201ENST00000332029 LOC105371045A0A1W2PR82 267 aa33.68■■■□□ 2.98
SOCS1-201ENST00000332029 CAMSAP1Q5T5Y3 1602 aa33.68■■■□□ 2.98
SOCS1-201ENST00000332029 PPP6R1Q9UPN7 881 aa33.67■■■□□ 2.98
SOCS1-201ENST00000332029 PTPRKQ15262 1439 aa33.66■■■□□ 2.98
SOCS1-201ENST00000332029 NCOA2Q15596 1464 aa33.66■■■□□ 2.98
SOCS1-201ENST00000332029 DHX29Q7Z478 1369 aaKnown RBP33.62■■■□□ 2.97
SOCS1-201ENST00000332029 CCDC141Q6ZP82 1450 aa33.62■■■□□ 2.97
SOCS1-201ENST00000332029 MYO3AQ8NEV4 1616 aa33.61■■■□□ 2.97
SOCS1-201ENST00000332029 CAMSAP2Q08AD1 1489 aa33.61■■■□□ 2.97
SOCS1-201ENST00000332029 LTBP4Q8N2S1 1624 aa33.6■■■□□ 2.97
SOCS1-201ENST00000332029 ZNF142P52746 1687 aaPredicted RBP33.58■■■□□ 2.97
SOCS1-201ENST00000332029 NCKAP5LQ9HCH0 1330 aa33.57■■■□□ 2.97
SOCS1-201ENST00000332029 CEP170BQ9Y4F5 1589 aaPredicted RBP33.56■■■□□ 2.96
SOCS1-201ENST00000332029 RSPH4AQ5TD94 716 aa33.56■■■□□ 2.96
SOCS1-201ENST00000332029 PLA2R1Q13018 1463 aa33.55■■■□□ 2.96
SOCS1-201ENST00000332029 KIF3BO15066 747 aa33.52■■■□□ 2.96
SOCS1-201ENST00000332029 PKD2Q13563 968 aa33.52■■■□□ 2.96
SOCS1-201ENST00000332029 VPS8Q8N3P4 1428 aa33.51■■■□□ 2.95
SOCS1-201ENST00000332029 IQSEC2Q5JU85 1478 aa33.5■■■□□ 2.95
SOCS1-201ENST00000332029 TCOF1Q13428 1488 aaKnown RBP33.49■■■□□ 2.95
SOCS1-201ENST00000332029 LRRC9Q6ZRR7 1453 aa33.47■■■□□ 2.95
SOCS1-201ENST00000332029 ARHGEF5Q12774 1597 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms