RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
CLN8-201ENST00000331222 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
CLN8-201ENST00000331222 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
CLN8-201ENST00000331222 GGT6Q6P531 493 aa13.49□□□□□ -0.25
CLN8-201ENST00000331222 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
CLN8-201ENST00000331222 NOL8Q76FK4 1167 aaKnown RBP13.48□□□□□ -0.25
CLN8-201ENST00000331222 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
CLN8-201ENST00000331222 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
CLN8-201ENST00000331222 CLIP1P30622 1438 aa13.46□□□□□ -0.25
CLN8-201ENST00000331222 FOXD1Q16676 465 aa13.46□□□□□ -0.26
CLN8-201ENST00000331222 MORC1Q86VD1 984 aa13.46□□□□□ -0.26
CLN8-201ENST00000331222 MSNP26038 577 aaKnown RBP13.45□□□□□ -0.26
CLN8-201ENST00000331222 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
CLN8-201ENST00000331222 GORABQ5T7V8 394 aa13.45□□□□□ -0.26
CLN8-201ENST00000331222 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
CLN8-201ENST00000331222 NRDCO43847 1150 aa13.45□□□□□ -0.26
CLN8-201ENST00000331222 CHAF1AQ13111 956 aaPredicted RBP13.45□□□□□ -0.26
CLN8-201ENST00000331222 MCCP23508 829 aa13.45□□□□□ -0.26
CLN8-201ENST00000331222 MSH5O43196 834 aa13.44□□□□□ -0.26
CLN8-201ENST00000331222 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
CLN8-201ENST00000331222 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
CLN8-201ENST00000331222 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
CLN8-201ENST00000331222 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
CLN8-201ENST00000331222 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
CLN8-201ENST00000331222 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
CLN8-201ENST00000331222 RAD21O60216 631 aa13.41□□□□□ -0.26
CLN8-201ENST00000331222 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
CLN8-201ENST00000331222 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
CLN8-201ENST00000331222 SLC4A10Q6U841 1118 aa13.4□□□□□ -0.26
CLN8-201ENST00000331222 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
CLN8-201ENST00000331222 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
CLN8-201ENST00000331222 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
CLN8-201ENST00000331222 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
CLN8-201ENST00000331222 TMF1P82094 1093 aa13.39□□□□□ -0.27
CLN8-201ENST00000331222 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
CLN8-201ENST00000331222 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
CLN8-201ENST00000331222 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
CLN8-201ENST00000331222 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
CLN8-201ENST00000331222 L1TD1Q5T7N2 865 aaKnown RBP13.36□□□□□ -0.27
CLN8-201ENST00000331222 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
CLN8-201ENST00000331222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.35□□□□□ -0.27
CLN8-201ENST00000331222 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
CLN8-201ENST00000331222 FOXD4L6Q3SYB3 417 aaPredicted RBP13.35□□□□□ -0.27
CLN8-201ENST00000331222 FOXD4L3Q6VB84 417 aaPredicted RBP13.35□□□□□ -0.27
CLN8-201ENST00000331222 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
CLN8-201ENST00000331222 KANK1Q14678 1352 aa13.35□□□□□ -0.27
CLN8-201ENST00000331222 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
CLN8-201ENST00000331222 U2AF1L5P0DN76 240 aaPredicted RBP13.34□□□□□ -0.27
CLN8-201ENST00000331222 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLN8-201ENST00000331222 MARCH6O60337 910 aa13.34□□□□□ -0.27
CLN8-201ENST00000331222 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
CLN8-201ENST00000331222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.27
CLN8-201ENST00000331222 FBXW7Q969H0 707 aa13.33□□□□□ -0.28
CLN8-201ENST00000331222 CHMP4BQ9H444 224 aaKnown RBP13.33□□□□□ -0.28
CLN8-201ENST00000331222 MFAP1P55081 439 aaKnown RBP13.32□□□□□ -0.28
CLN8-201ENST00000331222 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
CLN8-201ENST00000331222 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
CLN8-201ENST00000331222 MS4A1P11836 297 aa13.32□□□□□ -0.28
CLN8-201ENST00000331222 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
CLN8-201ENST00000331222 PATL2C9JE40 543 aaKnown RBP13.3□□□□□ -0.28
CLN8-201ENST00000331222 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
CLN8-201ENST00000331222 CLUAP1Q96AJ1 413 aa13.28□□□□□ -0.28
CLN8-201ENST00000331222 EVA1CP58658 441 aa13.28□□□□□ -0.28
CLN8-201ENST00000331222 CEP162Q5TB80 1403 aa13.27□□□□□ -0.28
CLN8-201ENST00000331222 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.28
CLN8-201ENST00000331222 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.28
CLN8-201ENST00000331222 CCNB3Q8WWL7 1395 aa13.27□□□□□ -0.28
CLN8-201ENST00000331222 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
CLN8-201ENST00000331222 MEX3CQ5U5Q3 659 aaKnown RBP13.27□□□□□ -0.29
CLN8-201ENST00000331222 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
CLN8-201ENST00000331222 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
CLN8-201ENST00000331222 NACADO15069 1562 aa13.25□□□□□ -0.29
CLN8-201ENST00000331222 AMPHP49418 695 aa13.25□□□□□ -0.29
CLN8-201ENST00000331222 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
CLN8-201ENST00000331222 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
CLN8-201ENST00000331222 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
CLN8-201ENST00000331222 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
CLN8-201ENST00000331222 AEBP2Q6ZN18 517 aaPredicted RBP13.24□□□□□ -0.29
CLN8-201ENST00000331222 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
CLN8-201ENST00000331222 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
CLN8-201ENST00000331222 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
CLN8-201ENST00000331222 TPM4P67936 248 aa13.23□□□□□ -0.29
CLN8-201ENST00000331222 RRP7AQ9Y3A4 280 aaKnown RBP13.23□□□□□ -0.29
CLN8-201ENST00000331222 RILPL2Q969X0 211 aa13.22□□□□□ -0.29
CLN8-201ENST00000331222 TCEAL9Q9UHQ7 104 aa13.22□□□□□ -0.29
CLN8-201ENST00000331222 TPD52L1Q16890 204 aaPredicted RBP13.22□□□□□ -0.29
CLN8-201ENST00000331222 CCAR2Q8N163 923 aaKnown RBP13.22□□□□□ -0.29
CLN8-201ENST00000331222 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
CLN8-201ENST00000331222 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
CLN8-201ENST00000331222 FOSBP53539 338 aa13.2□□□□□ -0.3
CLN8-201ENST00000331222 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
CLN8-201ENST00000331222 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
CLN8-201ENST00000331222 PKD2Q13563 968 aa13.19□□□□□ -0.3
CLN8-201ENST00000331222 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
CLN8-201ENST00000331222 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
CLN8-201ENST00000331222 TNNT3P45378 269 aaPredicted RBP13.19□□□□□ -0.3
CLN8-201ENST00000331222 KDM4AO75164 1064 aa13.19□□□□□ -0.3
CLN8-201ENST00000331222 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
CLN8-201ENST00000331222 GOLGA6L1Q8N7Z2 621 aa13.18□□□□□ -0.3
CLN8-201ENST00000331222 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 235.3 ms