RNA–Protein interactions for RNA: ENST00000330953.5

CCR4-201, Transcript of C-C motif chemokine receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR4, Length 3,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR4-201ENST00000330953 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
CCR4-201ENST00000330953 GPATCH8Q9UKJ3 1502 aaKnown RBP13.95□□□□□ -0.18
CCR4-201ENST00000330953 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
CCR4-201ENST00000330953 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
CCR4-201ENST00000330953 NEO1Q92859 1461 aa13.93□□□□□ -0.18
CCR4-201ENST00000330953 EIF2AK4Q9P2K8 1649 aaKnown RBP13.93□□□□□ -0.18
CCR4-201ENST00000330953 INO80Q9ULG1 1556 aaPredicted RBP13.93□□□□□ -0.18
CCR4-201ENST00000330953 RICTORQ6R327 1708 aa13.91□□□□□ -0.18
CCR4-201ENST00000330953 PLCH2O75038 1416 aa13.91□□□□□ -0.18
CCR4-201ENST00000330953 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
CCR4-201ENST00000330953 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
CCR4-201ENST00000330953 DEPDC5O75140 1603 aa13.89□□□□□ -0.19
CCR4-201ENST00000330953 KDM5DQ9BY66 1539 aa13.88□□□□□ -0.19
CCR4-201ENST00000330953 ROCK1Q13464 1354 aa13.88□□□□□ -0.19
CCR4-201ENST00000330953 ASXL2Q76L83 1435 aa13.88□□□□□ -0.19
CCR4-201ENST00000330953 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
CCR4-201ENST00000330953 RTEL1-TNFRSF6BF6WH68 1400 aa13.85□□□□□ -0.19
CCR4-201ENST00000330953 HRCP23327 699 aa13.85□□□□□ -0.19
CCR4-201ENST00000330953 FRMPD1Q5SYB0 1578 aa13.84□□□□□ -0.19
CCR4-201ENST00000330953 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
CCR4-201ENST00000330953 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
CCR4-201ENST00000330953 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.19
CCR4-201ENST00000330953 UNC13BO14795 1591 aa13.83□□□□□ -0.2
CCR4-201ENST00000330953 RNF17Q9BXT8 1623 aaKnown RBP13.83□□□□□ -0.2
CCR4-201ENST00000330953 FBLN2P98095 1184 aa13.82□□□□□ -0.2
CCR4-201ENST00000330953 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
CCR4-201ENST00000330953 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
CCR4-201ENST00000330953 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
CCR4-201ENST00000330953 CCNB3Q8WWL7 1395 aa13.79□□□□□ -0.2
CCR4-201ENST00000330953 NEURL4Q96JN8 1562 aa13.78□□□□□ -0.2
CCR4-201ENST00000330953 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
CCR4-201ENST00000330953 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
CCR4-201ENST00000330953 MLH3Q9UHC1 1453 aa13.77□□□□□ -0.21
CCR4-201ENST00000330953 KANK4Q5T7N3 995 aaPredicted RBP13.77□□□□□ -0.21
CCR4-201ENST00000330953 ZC3H13Q5T200 1668 aaKnown RBP13.76□□□□□ -0.21
CCR4-201ENST00000330953 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
CCR4-201ENST00000330953 RSPH4AQ5TD94 716 aa13.76□□□□□ -0.21
CCR4-201ENST00000330953 HFM1A2PYH4 1435 aa13.75□□□□□ -0.21
CCR4-201ENST00000330953 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
CCR4-201ENST00000330953 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
CCR4-201ENST00000330953 DAPK1P53355 1430 aa13.75□□□□□ -0.21
CCR4-201ENST00000330953 CCDC141Q6ZP82 1450 aa13.75□□□□□ -0.21
CCR4-201ENST00000330953 AGLP35573 1532 aa13.73□□□□□ -0.21
CCR4-201ENST00000330953 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
CCR4-201ENST00000330953 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
CCR4-201ENST00000330953 ABCC5O15440 1437 aa13.72□□□□□ -0.21
CCR4-201ENST00000330953 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
CCR4-201ENST00000330953 POGZQ7Z3K3 1410 aa13.7□□□□□ -0.22
CCR4-201ENST00000330953 PLEKHD1A6NEE1 506 aa13.7□□□□□ -0.22
CCR4-201ENST00000330953 DUOX2Q9NRD8 1548 aa13.7□□□□□ -0.22
CCR4-201ENST00000330953 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
CCR4-201ENST00000330953 ERBINQ96RT1 1412 aa13.69□□□□□ -0.22
CCR4-201ENST00000330953 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
CCR4-201ENST00000330953 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
CCR4-201ENST00000330953 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
CCR4-201ENST00000330953 ARHGAP5Q13017 1502 aa13.69□□□□□ -0.22
CCR4-201ENST00000330953 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
CCR4-201ENST00000330953 FANCAO15360 1455 aa13.68□□□□□ -0.22
CCR4-201ENST00000330953 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
CCR4-201ENST00000330953 MROH2AA6NES4 1674 aa13.68□□□□□ -0.22
CCR4-201ENST00000330953 ATP7AQ04656 1500 aa13.67□□□□□ -0.22
CCR4-201ENST00000330953 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
CCR4-201ENST00000330953 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
CCR4-201ENST00000330953 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
CCR4-201ENST00000330953 APLP2Q06481 763 aa13.65□□□□□ -0.23
CCR4-201ENST00000330953 PTPRKQ15262 1439 aa13.65□□□□□ -0.23
CCR4-201ENST00000330953 KDM5AP29375 1690 aaKnown RBP13.64□□□□□ -0.23
CCR4-201ENST00000330953 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
CCR4-201ENST00000330953 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
CCR4-201ENST00000330953 NCOA1Q15788 1441 aa13.63□□□□□ -0.23
CCR4-201ENST00000330953 NAIPQ13075 1403 aa13.62□□□□□ -0.23
CCR4-201ENST00000330953 ATP10AO60312 1499 aa13.62□□□□□ -0.23
CCR4-201ENST00000330953 TET3O43151 1660 aa13.61□□□□□ -0.23
CCR4-201ENST00000330953 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
CCR4-201ENST00000330953 ADGRL1O94910 1474 aa13.59□□□□□ -0.23
CCR4-201ENST00000330953 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
CCR4-201ENST00000330953 DENND4BO75064 1496 aaPredicted RBP13.56□□□□□ -0.24
CCR4-201ENST00000330953 KDM6BO15054 1643 aa13.55□□□□□ -0.24
CCR4-201ENST00000330953 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
CCR4-201ENST00000330953 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
CCR4-201ENST00000330953 SIGLEC1Q9BZZ2 1709 aa13.53□□□□□ -0.24
CCR4-201ENST00000330953 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
CCR4-201ENST00000330953 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCR4-201ENST00000330953 TRAPPC8Q9Y2L5 1435 aa13.52□□□□□ -0.24
CCR4-201ENST00000330953 RPRD2Q5VT52 1461 aaKnown RBP13.52□□□□□ -0.25
CCR4-201ENST00000330953 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
CCR4-201ENST00000330953 CEP152O94986 1710 aa13.5□□□□□ -0.25
CCR4-201ENST00000330953 ARHGAP31Q2M1Z3 1444 aa13.5□□□□□ -0.25
CCR4-201ENST00000330953 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
CCR4-201ENST00000330953 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
CCR4-201ENST00000330953 SPHKAPQ2M3C7 1700 aa13.48□□□□□ -0.25
CCR4-201ENST00000330953 PZPP20742 1482 aa13.48□□□□□ -0.25
CCR4-201ENST00000330953 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
CCR4-201ENST00000330953 TSPOAP1O95153 1857 aa13.47□□□□□ -0.25
CCR4-201ENST00000330953 E9PCH4 1651 aa13.47□□□□□ -0.25
CCR4-201ENST00000330953 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
CCR4-201ENST00000330953 SCAPERQ9BY12 1400 aa13.47□□□□□ -0.25
CCR4-201ENST00000330953 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
CCR4-201ENST00000330953 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
CCR4-201ENST00000330953 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms