RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 SCAPERQ9BY12 1400 aa29.42■■■□□ 2.3
RAB28-202ENST00000330852 ARID4BQ4LE39 1312 aaPredicted RBP29.4■■■□□ 2.3
RAB28-202ENST00000330852 FYCO1Q9BQS8 1478 aa29.39■■■□□ 2.3
RAB28-202ENST00000330852 POGZQ7Z3K3 1410 aa29.38■■■□□ 2.29
RAB28-202ENST00000330852 HECW2Q9P2P5 1572 aa29.38■■■□□ 2.29
RAB28-202ENST00000330852 ZFYVE16Q7Z3T8 1539 aa29.38■■■□□ 2.29
RAB28-202ENST00000330852 PTPRMP28827 1452 aa29.35■■■□□ 2.29
RAB28-202ENST00000330852 ARHGAP5Q13017 1502 aa29.33■■■□□ 2.29
RAB28-202ENST00000330852 YEATS2Q9ULM3 1422 aa29.3■■■□□ 2.28
RAB28-202ENST00000330852 CDC42BPBQ9Y5S2 1711 aa29.3■■■□□ 2.28
RAB28-202ENST00000330852 MADDQ8WXG6 1647 aa29.29■■■□□ 2.28
RAB28-202ENST00000330852 ZNF518AQ6AHZ1 1483 aa29.29■■■□□ 2.28
RAB28-202ENST00000330852 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
RAB28-202ENST00000330852 ATP10AO60312 1499 aa29.24■■■□□ 2.27
RAB28-202ENST00000330852 KDM5CP41229 1560 aa29.23■■■□□ 2.27
RAB28-202ENST00000330852 CDC42BPAQ5VT25 1732 aa29.21■■■□□ 2.27
RAB28-202ENST00000330852 SIGLEC1Q9BZZ2 1709 aa29.2■■■□□ 2.27
RAB28-202ENST00000330852 RIMS1Q86UR5 1692 aaKnown RBP29.2■■■□□ 2.27
RAB28-202ENST00000330852 C9orf84Q5VXU9 1444 aa29.2■■■□□ 2.26
RAB28-202ENST00000330852 AFAP1Q8N556 730 aa29.17■■■□□ 2.26
RAB28-202ENST00000330852 ABCC1P33527 1531 aa29.16■■■□□ 2.26
RAB28-202ENST00000330852 MLH3Q9UHC1 1453 aa29.14■■■□□ 2.26
RAB28-202ENST00000330852 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
RAB28-202ENST00000330852 FER1L4A9Z1Z3 1794 aa29.12■■■□□ 2.25
RAB28-202ENST00000330852 REREQ9P2R6 1566 aa29.1■■■□□ 2.25
RAB28-202ENST00000330852 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
RAB28-202ENST00000330852 MYT1LQ9UL68 1186 aa29.09■■■□□ 2.25
RAB28-202ENST00000330852 ARHGEF12Q9NZN5 1544 aa29.09■■■□□ 2.25
RAB28-202ENST00000330852 GPATCH8Q9UKJ3 1502 aaKnown RBP29.09■■■□□ 2.25
RAB28-202ENST00000330852 MLECQ14165 292 aa29.08■■■□□ 2.25
RAB28-202ENST00000330852 DIP2CQ9Y2E4 1556 aa29.07■■■□□ 2.24
RAB28-202ENST00000330852 TRAPPC8Q9Y2L5 1435 aa29.07■■■□□ 2.24
RAB28-202ENST00000330852 MTUS2Q5JR59 1369 aa29.07■■■□□ 2.24
RAB28-202ENST00000330852 ABCA6Q8N139 1617 aa29.03■■■□□ 2.24
RAB28-202ENST00000330852 LMTK3Q96Q04 1460 aa29.03■■■□□ 2.24
RAB28-202ENST00000330852 SAMD9LQ8IVG5 1584 aa29.02■■■□□ 2.24
RAB28-202ENST00000330852 CCNB3Q8WWL7 1395 aa29.02■■■□□ 2.24
RAB28-202ENST00000330852 PLEKHH2Q8IVE3 1493 aa29.01■■■□□ 2.24
RAB28-202ENST00000330852 KIDINS220Q9ULH0 1771 aa29■■■□□ 2.23
RAB28-202ENST00000330852 KIAA1107Q9UPP5 1409 aa29■■■□□ 2.23
RAB28-202ENST00000330852 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
RAB28-202ENST00000330852 ZNF777Q9ULD5 760 aaPredicted RBP29■■■□□ 2.23
RAB28-202ENST00000330852 AGLP35573 1532 aa28.99■■■□□ 2.23
RAB28-202ENST00000330852 EHBP1L1Q8N3D4 1523 aa28.99■■■□□ 2.23
RAB28-202ENST00000330852 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
RAB28-202ENST00000330852 SETD1BQ9UPS6 1966 aaKnown RBP28.93■■■□□ 2.22
RAB28-202ENST00000330852 HNRNPMP52272 730 aaKnown RBP eCLIP28.91■■■□□ 2.222e-6■■■■□ 25.1
RAB28-202ENST00000330852 PLPPR3Q6T4P5 718 aa28.91■■■□□ 2.22
RAB28-202ENST00000330852 SPAG9O60271 1321 aaKnown RBP28.91■■■□□ 2.22
RAB28-202ENST00000330852 TIAM1Q13009 1591 aa28.9■■■□□ 2.22
RAB28-202ENST00000330852 ILDR1Q86SU0 546 aaPredicted RBP28.88■■■□□ 2.21
RAB28-202ENST00000330852 PREX1Q8TCU6 1659 aa28.86■■■□□ 2.21
RAB28-202ENST00000330852 ATP7AQ04656 1500 aa28.85■■■□□ 2.21
RAB28-202ENST00000330852 ESF1Q9H501 851 aaKnown RBP28.85■■■□□ 2.21
RAB28-202ENST00000330852 SUPT6HQ7KZ85 1726 aaKnown RBP28.85■■■□□ 2.21
RAB28-202ENST00000330852 LOC105371045A0A1W2PR82 267 aa28.84■■■□□ 2.21
RAB28-202ENST00000330852 INO80Q9ULG1 1556 aaPredicted RBP28.83■■■□□ 2.21
RAB28-202ENST00000330852 VPS8Q8N3P4 1428 aa28.82■■■□□ 2.2
RAB28-202ENST00000330852 CNTLNQ9NXG0 1405 aa28.82■■■□□ 2.2
RAB28-202ENST00000330852 CEBPAP49715 358 aaPredicted RBP28.81■■■□□ 2.2
RAB28-202ENST00000330852 HSPA2P54652 639 aa28.8■■■□□ 2.2
RAB28-202ENST00000330852 C3P01024 1663 aa28.8■■■□□ 2.2
RAB28-202ENST00000330852 NCOA2Q15596 1464 aa28.78■■■□□ 2.2
RAB28-202ENST00000330852 MBD5Q9P267 1494 aa28.77■■■□□ 2.2
RAB28-202ENST00000330852 A2MP01023 1474 aa28.76■■■□□ 2.2
RAB28-202ENST00000330852 ZNF644Q9H582 1327 aaPredicted RBP28.76■■■□□ 2.19
RAB28-202ENST00000330852 ADGBQ8N7X0 1667 aa28.76■■■□□ 2.19
RAB28-202ENST00000330852 PLXNC1O60486 1568 aa28.76■■■□□ 2.19
RAB28-202ENST00000330852 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
RAB28-202ENST00000330852 UHRF1BP1Q6BDS2 1440 aa28.74■■■□□ 2.19
RAB28-202ENST00000330852 MROH2AA6NES4 1674 aa28.74■■■□□ 2.19
RAB28-202ENST00000330852 RSPH4AQ5TD94 716 aa28.74■■■□□ 2.19
RAB28-202ENST00000330852 MAP3K1Q13233 1512 aa28.73■■■□□ 2.19
RAB28-202ENST00000330852 LRRC9Q6ZRR7 1453 aa28.71■■■□□ 2.19
RAB28-202ENST00000330852 PPP6R1Q9UPN7 881 aa28.68■■■□□ 2.18
RAB28-202ENST00000330852 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
RAB28-202ENST00000330852 CCDC141Q6ZP82 1450 aa28.67■■■□□ 2.18
RAB28-202ENST00000330852 NPATQ14207 1427 aa28.65■■■□□ 2.18
RAB28-202ENST00000330852 FBXO41Q8TF61 875 aa28.65■■■□□ 2.18
RAB28-202ENST00000330852 ZMYM3Q14202 1370 aa28.64■■■□□ 2.17
RAB28-202ENST00000330852 DMRT2Q9Y5R5 561 aa28.63■■■□□ 2.17
RAB28-202ENST00000330852 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
RAB28-202ENST00000330852 DHX29Q7Z478 1369 aaKnown RBP28.61■■■□□ 2.17
RAB28-202ENST00000330852 CLTCQ00610 1675 aaKnown RBP28.6■■■□□ 2.17
RAB28-202ENST00000330852 STRCQ7RTU9 1775 aa28.6■■■□□ 2.17
RAB28-202ENST00000330852 GGT6Q6P531 493 aa28.59■■■□□ 2.17
RAB28-202ENST00000330852 TSPY4P0CV99 314 aa28.56■■■□□ 2.16
RAB28-202ENST00000330852 TSPY10P0CW01 314 aa28.56■■■□□ 2.16
RAB28-202ENST00000330852 MIA2Q96PC5 1412 aa28.54■■■□□ 2.16
RAB28-202ENST00000330852 KANK4Q5T7N3 995 aaPredicted RBP28.54■■■□□ 2.16
RAB28-202ENST00000330852 FAM135AQ9P2D6 1515 aa28.52■■■□□ 2.16
RAB28-202ENST00000330852 MYOM3Q5VTT5 1437 aa28.51■■■□□ 2.15
RAB28-202ENST00000330852 APLP2Q06481 763 aa28.51■■■□□ 2.15
RAB28-202ENST00000330852 PTPRTO14522 1441 aa28.49■■■□□ 2.15
RAB28-202ENST00000330852 PTPRKQ15262 1439 aa28.48■■■□□ 2.15
RAB28-202ENST00000330852 MAST1Q9Y2H9 1570 aa28.48■■■□□ 2.15
RAB28-202ENST00000330852 KIF3BO15066 747 aa28.48■■■□□ 2.15
RAB28-202ENST00000330852 CERKQ8TCT0 537 aa28.46■■■□□ 2.15
RAB28-202ENST00000330852 ZNF142P52746 1687 aaPredicted RBP28.45■■■□□ 2.14
RAB28-202ENST00000330852 NCOA1Q15788 1441 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms