RNA–Protein interactions for RNA: ENST00000329331.7

SETD3-201, Transcript of SET domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SETD3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD3-201ENST00000329331 CCDC18Q5T9S5 1454 aa28.59■■■□□ 2.17
SETD3-201ENST00000329331 BCORL1Q5H9F3 1711 aa28.57■■■□□ 2.16
SETD3-201ENST00000329331 ZFYVE16Q7Z3T8 1539 aa28.57■■■□□ 2.16
SETD3-201ENST00000329331 YEATS2Q9ULM3 1422 aa28.57■■■□□ 2.16
SETD3-201ENST00000329331 LRRIQ1Q96JM4 1722 aa28.56■■■□□ 2.16
SETD3-201ENST00000329331 MYO5CQ9NQX4 1742 aa28.56■■■□□ 2.16
SETD3-201ENST00000329331 PCF11O94913 1555 aaKnown RBP28.55■■■□□ 2.16
SETD3-201ENST00000329331 FYCO1Q9BQS8 1478 aa28.52■■■□□ 2.16
SETD3-201ENST00000329331 ARHGAP5Q13017 1502 aa28.51■■■□□ 2.15
SETD3-201ENST00000329331 MADDQ8WXG6 1647 aa28.49■■■□□ 2.15
SETD3-201ENST00000329331 ZNF518AQ6AHZ1 1483 aa28.47■■■□□ 2.15
SETD3-201ENST00000329331 ATP10AO60312 1499 aa28.46■■■□□ 2.15
SETD3-201ENST00000329331 AFAP1Q8N556 730 aa28.46■■■□□ 2.15
SETD3-201ENST00000329331 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
SETD3-201ENST00000329331 MLECQ14165 292 aa28.39■■■□□ 2.13
SETD3-201ENST00000329331 KDM5CP41229 1560 aa28.39■■■□□ 2.13
SETD3-201ENST00000329331 SIGLEC1Q9BZZ2 1709 aa28.39■■■□□ 2.13
SETD3-201ENST00000329331 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
SETD3-201ENST00000329331 PREX2Q70Z35 1606 aa28.37■■■□□ 2.13
SETD3-201ENST00000329331 MYT1LQ9UL68 1186 aa28.36■■■□□ 2.13
SETD3-201ENST00000329331 RIMS1Q86UR5 1692 aaKnown RBP28.35■■■□□ 2.13
SETD3-201ENST00000329331 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
SETD3-201ENST00000329331 ARHGEF12Q9NZN5 1544 aa28.33■■■□□ 2.13
SETD3-201ENST00000329331 TRAPPC8Q9Y2L5 1435 aa28.33■■■□□ 2.13
SETD3-201ENST00000329331 ABCC1P33527 1531 aa28.32■■■□□ 2.12
SETD3-201ENST00000329331 LMTK3Q96Q04 1460 aa28.3■■■□□ 2.12
SETD3-201ENST00000329331 GPATCH8Q9UKJ3 1502 aaKnown RBP28.29■■■□□ 2.12
SETD3-201ENST00000329331 ILDR1Q86SU0 546 aaPredicted RBP28.29■■■□□ 2.12
SETD3-201ENST00000329331 PLPPR3Q6T4P5 718 aa28.27■■■□□ 2.12
SETD3-201ENST00000329331 ZNF777Q9ULD5 760 aaPredicted RBP28.27■■■□□ 2.12
SETD3-201ENST00000329331 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
SETD3-201ENST00000329331 CDC42BPAQ5VT25 1732 aa28.26■■■□□ 2.12
SETD3-201ENST00000329331 MTUS2Q5JR59 1369 aa28.26■■■□□ 2.11
SETD3-201ENST00000329331 REREQ9P2R6 1566 aa28.25■■■□□ 2.11
SETD3-201ENST00000329331 DIP2CQ9Y2E4 1556 aa28.25■■■□□ 2.11
SETD3-201ENST00000329331 CFDP1Q9UEE9 299 aaPredicted RBP28.23■■■□□ 2.11
SETD3-201ENST00000329331 CCNB3Q8WWL7 1395 aa28.22■■■□□ 2.11
SETD3-201ENST00000329331 ITSN2Q9NZM3 1697 aa28.22■■■□□ 2.11
SETD3-201ENST00000329331 FER1L4A9Z1Z3 1794 aa28.22■■■□□ 2.11
SETD3-201ENST00000329331 KIAA1107Q9UPP5 1409 aa28.2■■■□□ 2.1
SETD3-201ENST00000329331 HNRNPMP52272 730 aaKnown RBP eCLIP28.19■■■□□ 2.17e-7■■■□□ 14.8
SETD3-201ENST00000329331 ABCA6Q8N139 1617 aa28.18■■■□□ 2.1
SETD3-201ENST00000329331 SAMD9LQ8IVG5 1584 aa28.18■■■□□ 2.1
SETD3-201ENST00000329331 AGLP35573 1532 aa28.17■■■□□ 2.1
SETD3-201ENST00000329331 PLEKHH2Q8IVE3 1493 aa28.17■■■□□ 2.1
SETD3-201ENST00000329331 SPAG9O60271 1321 aaKnown RBP28.16■■■□□ 2.1
SETD3-201ENST00000329331 HSPA2P54652 639 aa28.16■■■□□ 2.1
SETD3-201ENST00000329331 CEBPAP49715 358 aaPredicted RBP28.15■■■□□ 2.1
SETD3-201ENST00000329331 SYCP2Q9BX26 1530 aa28.14■■■□□ 2.1
SETD3-201ENST00000329331 KIDINS220Q9ULH0 1771 aa28.13■■■□□ 2.09
SETD3-201ENST00000329331 EHBP1L1Q8N3D4 1523 aa28.11■■■□□ 2.09
SETD3-201ENST00000329331 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
SETD3-201ENST00000329331 ESF1Q9H501 851 aaKnown RBP28.1■■■□□ 2.09
SETD3-201ENST00000329331 TIAM1Q13009 1591 aa28.05■■■□□ 2.08
SETD3-201ENST00000329331 ZNF644Q9H582 1327 aaPredicted RBP28.05■■■□□ 2.08
SETD3-201ENST00000329331 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
SETD3-201ENST00000329331 ATP7AQ04656 1500 aa28.02■■■□□ 2.08
SETD3-201ENST00000329331 MBD5Q9P267 1494 aa28■■■□□ 2.07
SETD3-201ENST00000329331 FBXO41Q8TF61 875 aa27.99■■■□□ 2.07
SETD3-201ENST00000329331 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
SETD3-201ENST00000329331 PREX1Q8TCU6 1659 aa27.99■■■□□ 2.07
SETD3-201ENST00000329331 VPS8Q8N3P4 1428 aa27.98■■■□□ 2.07
SETD3-201ENST00000329331 A2MP01023 1474 aa27.98■■■□□ 2.07
SETD3-201ENST00000329331 INO80Q9ULG1 1556 aaPredicted RBP27.98■■■□□ 2.07
SETD3-201ENST00000329331 NCOA2Q15596 1464 aa27.96■■■□□ 2.07
SETD3-201ENST00000329331 SETD1BQ9UPS6 1966 aaKnown RBP27.95■■■□□ 2.06
SETD3-201ENST00000329331 RTEL1-TNFRSF6BF6WH68 1400 aa27.94■■■□□ 2.06
SETD3-201ENST00000329331 C3P01024 1663 aa27.94■■■□□ 2.06
SETD3-201ENST00000329331 RSPH4AQ5TD94 716 aa27.93■■■□□ 2.06
SETD3-201ENST00000329331 PLXNC1O60486 1568 aa27.93■■■□□ 2.06
SETD3-201ENST00000329331 SUPT6HQ7KZ85 1726 aaKnown RBP27.92■■■□□ 2.06
SETD3-201ENST00000329331 ZMYM3Q14202 1370 aa27.91■■■□□ 2.06
SETD3-201ENST00000329331 PPP6R1Q9UPN7 881 aa27.91■■■□□ 2.06
SETD3-201ENST00000329331 DMRT2Q9Y5R5 561 aa27.91■■■□□ 2.06
SETD3-201ENST00000329331 GGT6Q6P531 493 aa27.89■■■□□ 2.05
SETD3-201ENST00000329331 LRRC9Q6ZRR7 1453 aa27.88■■■□□ 2.05
SETD3-201ENST00000329331 NPATQ14207 1427 aa27.87■■■□□ 2.05
SETD3-201ENST00000329331 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
SETD3-201ENST00000329331 CAMSAP2Q08AD1 1489 aa27.86■■■□□ 2.05
SETD3-201ENST00000329331 CCDC141Q6ZP82 1450 aa27.85■■■□□ 2.05
SETD3-201ENST00000329331 MAP3K1Q13233 1512 aa27.84■■■□□ 2.05
SETD3-201ENST00000329331 MROH2AA6NES4 1674 aa27.84■■■□□ 2.05
SETD3-201ENST00000329331 ADGBQ8N7X0 1667 aa27.84■■■□□ 2.05
SETD3-201ENST00000329331 KANK4Q5T7N3 995 aaPredicted RBP27.81■■■□□ 2.04
SETD3-201ENST00000329331 CERKQ8TCT0 537 aa27.8■■■□□ 2.04
SETD3-201ENST00000329331 TSPY4P0CV99 314 aa27.79■■■□□ 2.04
SETD3-201ENST00000329331 TSPY10P0CW01 314 aa27.79■■■□□ 2.04
SETD3-201ENST00000329331 STRCQ7RTU9 1775 aa27.78■■■□□ 2.04
SETD3-201ENST00000329331 ARHGEF5Q12774 1597 aa27.75■■■□□ 2.03
SETD3-201ENST00000329331 CLTCQ00610 1675 aaKnown RBP27.75■■■□□ 2.03
SETD3-201ENST00000329331 PTPRTO14522 1441 aa27.75■■■□□ 2.03
SETD3-201ENST00000329331 KIF3BO15066 747 aa27.74■■■□□ 2.03
SETD3-201ENST00000329331 PTPRKQ15262 1439 aa27.74■■■□□ 2.03
SETD3-201ENST00000329331 NCOA1Q15788 1441 aa27.71■■■□□ 2.03
SETD3-201ENST00000329331 MIA2Q96PC5 1412 aa27.71■■■□□ 2.03
SETD3-201ENST00000329331 MYOM3Q5VTT5 1437 aa27.69■■■□□ 2.02
SETD3-201ENST00000329331 APLP2Q06481 763 aa27.67■■■□□ 2.02
SETD3-201ENST00000329331 WASHC2CQ9Y4E1 1318 aa27.65■■■□□ 2.02
SETD3-201ENST00000329331 FAM135AQ9P2D6 1515 aa27.64■■■□□ 2.02
SETD3-201ENST00000329331 CAMSAP1Q5T5Y3 1602 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms