RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 EFCAB2Q5VUJ9 269 aa34.46■■■■□ 3.11
TNRC18-201ENST00000328270 MTUS2Q5JR59 1369 aa34.46■■■■□ 3.11
TNRC18-201ENST00000328270 EHBP1L1Q8N3D4 1523 aa34.43■■■■□ 3.1
TNRC18-201ENST00000328270 SCAPERQ9BY12 1400 aa34.41■■■■□ 3.1
TNRC18-201ENST00000328270 AEBP2Q6ZN18 517 aaPredicted RBP34.39■■■■□ 3.1
TNRC18-201ENST00000328270 TIAM1Q13009 1591 aa34.39■■■■□ 3.1
TNRC18-201ENST00000328270 ZMYM4Q5VZL5 1548 aa34.38■■■■□ 3.09
TNRC18-201ENST00000328270 POGZQ7Z3K3 1410 aa34.37■■■■□ 3.09
TNRC18-201ENST00000328270 KDM4FA0A1W2PPD8 638 aa34.36■■■■□ 3.09
TNRC18-201ENST00000328270 ARHGEF40Q8TER5 1519 aa34.34■■■■□ 3.09
TNRC18-201ENST00000328270 GPATCH8Q9UKJ3 1502 aaKnown RBP34.33■■■■□ 3.09
TNRC18-201ENST00000328270 ABCC1P33527 1531 aa34.3■■■■□ 3.08
TNRC18-201ENST00000328270 ITSN2Q9NZM3 1697 aa34.28■■■■□ 3.08
TNRC18-201ENST00000328270 CCNB3Q8WWL7 1395 aa34.28■■■■□ 3.08
TNRC18-201ENST00000328270 SUPT6HQ7KZ85 1726 aaKnown RBP34.28■■■■□ 3.08
TNRC18-201ENST00000328270 ZFYVE16Q7Z3T8 1539 aa34.26■■■■□ 3.08
TNRC18-201ENST00000328270 ZNF518AQ6AHZ1 1483 aa34.26■■■■□ 3.07
TNRC18-201ENST00000328270 MAGI2Q86UL8 1455 aa34.25■■■■□ 3.07
TNRC18-201ENST00000328270 MAP3K1Q13233 1512 aa34.25■■■■□ 3.07
TNRC18-201ENST00000328270 SAMD9LQ8IVG5 1584 aa34.24■■■■□ 3.07
TNRC18-201ENST00000328270 KDM5CP41229 1560 aa34.23■■■■□ 3.07
TNRC18-201ENST00000328270 ARHGEF12Q9NZN5 1544 aa34.22■■■■□ 3.07
TNRC18-201ENST00000328270 YEATS2Q9ULM3 1422 aa34.21■■■■□ 3.07
TNRC18-201ENST00000328270 LRRC9Q6ZRR7 1453 aa34.21■■■■□ 3.07
TNRC18-201ENST00000328270 NCOA2Q15596 1464 aa34.2■■■■□ 3.06
TNRC18-201ENST00000328270 ZNF777Q9ULD5 760 aaPredicted RBP34.18■■■■□ 3.06
TNRC18-201ENST00000328270 CFDP1Q9UEE9 299 aaPredicted RBP34.17■■■■□ 3.06
TNRC18-201ENST00000328270 HECW2Q9P2P5 1572 aa34.16■■■■□ 3.06
TNRC18-201ENST00000328270 TRAPPC8Q9Y2L5 1435 aa34.16■■■■□ 3.06
TNRC18-201ENST00000328270 AFAP1Q8N556 730 aa34.16■■■■□ 3.06
TNRC18-201ENST00000328270 SYCP2Q9BX26 1530 aa34.15■■■■□ 3.06
TNRC18-201ENST00000328270 SIGLEC1Q9BZZ2 1709 aa34.11■■■■□ 3.05
TNRC18-201ENST00000328270 PLEKHH2Q8IVE3 1493 aa34.11■■■■□ 3.05
TNRC18-201ENST00000328270 BCORL1Q5H9F3 1711 aa34.1■■■■□ 3.05
TNRC18-201ENST00000328270 KANK4Q5T7N3 995 aaPredicted RBP34.09■■■■□ 3.05
TNRC18-201ENST00000328270 ARID4BQ4LE39 1312 aaPredicted RBP34.08■■■■□ 3.05
TNRC18-201ENST00000328270 KIAA1107Q9UPP5 1409 aa34.07■■■■□ 3.04
TNRC18-201ENST00000328270 ADAMTSL3P82987 1691 aa34.07■■■■□ 3.04
TNRC18-201ENST00000328270 MLH3Q9UHC1 1453 aa34.07■■■■□ 3.04
TNRC18-201ENST00000328270 ATP10AO60312 1499 aa34.06■■■■□ 3.04
TNRC18-201ENST00000328270 APLP2Q06481 763 aa34.05■■■■□ 3.04
TNRC18-201ENST00000328270 DIP2CQ9Y2E4 1556 aa34.05■■■■□ 3.04
TNRC18-201ENST00000328270 ABCA6Q8N139 1617 aa34.04■■■■□ 3.04
TNRC18-201ENST00000328270 KIDINS220Q9ULH0 1771 aa34.04■■■■□ 3.04
TNRC18-201ENST00000328270 MYT1LQ9UL68 1186 aa34.04■■■■□ 3.04
TNRC18-201ENST00000328270 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
TNRC18-201ENST00000328270 HNRNPMP52272 730 aaKnown RBP eCLIP34.03■■■■□ 3.04
TNRC18-201ENST00000328270 ZNF644Q9H582 1327 aaPredicted RBP34.01■■■■□ 3.03
TNRC18-201ENST00000328270 MADDQ8WXG6 1647 aa33.97■■■■□ 3.03
TNRC18-201ENST00000328270 CAMSAP2Q08AD1 1489 aa33.96■■■■□ 3.03
TNRC18-201ENST00000328270 REREQ9P2R6 1566 aa33.95■■■■□ 3.03
TNRC18-201ENST00000328270 MBD5Q9P267 1494 aa33.94■■■■□ 3.02
TNRC18-201ENST00000328270 INO80Q9ULG1 1556 aaPredicted RBP33.94■■■■□ 3.02
TNRC18-201ENST00000328270 SPAG9O60271 1321 aaKnown RBP33.93■■■■□ 3.02
TNRC18-201ENST00000328270 ATP7AQ04656 1500 aa33.92■■■■□ 3.02
TNRC18-201ENST00000328270 MYOM3Q5VTT5 1437 aa33.89■■■■□ 3.02
TNRC18-201ENST00000328270 RIMS1Q86UR5 1692 aaKnown RBP33.89■■■■□ 3.02
TNRC18-201ENST00000328270 FER1L4A9Z1Z3 1794 aa33.87■■■■□ 3.01
TNRC18-201ENST00000328270 PTPRMP28827 1452 aa33.86■■■■□ 3.01
TNRC18-201ENST00000328270 CCDC141Q6ZP82 1450 aa33.84■■■■□ 3.01
TNRC18-201ENST00000328270 MLECQ14165 292 aa33.84■■■■□ 3.01
TNRC18-201ENST00000328270 MIA2Q96PC5 1412 aa33.83■■■■□ 3.01
TNRC18-201ENST00000328270 ARHGEF5Q12774 1597 aa33.82■■■■□ 3
TNRC18-201ENST00000328270 AGLP35573 1532 aa33.82■■■■□ 3
TNRC18-201ENST00000328270 ADGBQ8N7X0 1667 aa33.78■■■■□ 3
TNRC18-201ENST00000328270 RTEL1-TNFRSF6BF6WH68 1400 aa33.76■■■□□ 2.99
TNRC18-201ENST00000328270 RSPH4AQ5TD94 716 aa33.75■■■□□ 2.99
TNRC18-201ENST00000328270 PLXNC1O60486 1568 aa33.75■■■□□ 2.99
TNRC18-201ENST00000328270 PTPN23Q9H3S7 1636 aa33.73■■■□□ 2.99
TNRC18-201ENST00000328270 A2MP01023 1474 aa33.73■■■□□ 2.99
TNRC18-201ENST00000328270 FGD6Q6ZV73 1430 aa33.68■■■□□ 2.98
TNRC18-201ENST00000328270 MAST1Q9Y2H9 1570 aa33.65■■■□□ 2.98
TNRC18-201ENST00000328270 TSPY4P0CV99 314 aa33.63■■■□□ 2.97
TNRC18-201ENST00000328270 TSPY10P0CW01 314 aa33.63■■■□□ 2.97
TNRC18-201ENST00000328270 TCOF1Q13428 1488 aaKnown RBP33.63■■■□□ 2.97
TNRC18-201ENST00000328270 CROCC2H7BZ55 1655 aa33.62■■■□□ 2.97
TNRC18-201ENST00000328270 PLPPR3Q6T4P5 718 aa33.59■■■□□ 2.97
TNRC18-201ENST00000328270 DHX29Q7Z478 1369 aaKnown RBP33.58■■■□□ 2.97
TNRC18-201ENST00000328270 DNMT1P26358 1616 aaKnown RBP33.57■■■□□ 2.96
TNRC18-201ENST00000328270 C3P01024 1663 aa33.54■■■□□ 2.96
TNRC18-201ENST00000328270 ESF1Q9H501 851 aaKnown RBP33.53■■■□□ 2.96
TNRC18-201ENST00000328270 ABCC5O15440 1437 aa33.53■■■□□ 2.96
TNRC18-201ENST00000328270 SHANK2Q9UPX8 1470 aa33.52■■■□□ 2.96
TNRC18-201ENST00000328270 DAPK1P53355 1430 aa33.51■■■□□ 2.95
TNRC18-201ENST00000328270 CNTLNQ9NXG0 1405 aa33.51■■■□□ 2.95
TNRC18-201ENST00000328270 MROH2AA6NES4 1674 aa33.51■■■□□ 2.95
TNRC18-201ENST00000328270 CLTCQ00610 1675 aaKnown RBP33.49■■■□□ 2.95
TNRC18-201ENST00000328270 CEBPAP49715 358 aaPredicted RBP33.48■■■□□ 2.95
TNRC18-201ENST00000328270 GGT6Q6P531 493 aa33.47■■■□□ 2.95
TNRC18-201ENST00000328270 PPARGC1BQ86YN6 1023 aaKnown RBP33.46■■■□□ 2.95
TNRC18-201ENST00000328270 LMTK3Q96Q04 1460 aa33.44■■■□□ 2.94
TNRC18-201ENST00000328270 KIF3BO15066 747 aa33.43■■■□□ 2.94
TNRC18-201ENST00000328270 SETD1BQ9UPS6 1966 aaKnown RBP33.43■■■□□ 2.94
TNRC18-201ENST00000328270 FAM50AQ14320 339 aaKnown RBP33.42■■■□□ 2.94
TNRC18-201ENST00000328270 PREX1Q8TCU6 1659 aa33.42■■■□□ 2.94
TNRC18-201ENST00000328270 EIF2AK4Q9P2K8 1649 aaKnown RBP33.41■■■□□ 2.94
TNRC18-201ENST00000328270 DUOX2Q9NRD8 1548 aa33.39■■■□□ 2.94
TNRC18-201ENST00000328270 PPP6R1Q9UPN7 881 aa33.38■■■□□ 2.93
TNRC18-201ENST00000328270 RNF17Q9BXT8 1623 aaKnown RBP33.37■■■□□ 2.93
TNRC18-201ENST00000328270 KIF15Q9NS87 1388 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms