RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
ZKSCAN1-201ENST00000324306 GSE1Q14687 1217 aa11.85□□□□□ -0.51
ZKSCAN1-201ENST00000324306 RRP7BPQ9NSQ0 103 aa11.85□□□□□ -0.51
ZKSCAN1-201ENST00000324306 FRAT1Q92837 279 aaPredicted RBP11.85□□□□□ -0.51
ZKSCAN1-201ENST00000324306 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
ZKSCAN1-201ENST00000324306 TMF1P82094 1093 aa11.84□□□□□ -0.51
ZKSCAN1-201ENST00000324306 RCAN3Q9UKA8 241 aa11.84□□□□□ -0.51
ZKSCAN1-201ENST00000324306 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
ZKSCAN1-201ENST00000324306 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
ZKSCAN1-201ENST00000324306 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
ZKSCAN1-201ENST00000324306 A0A0U1RQG5 324 aaPredicted RBP11.82□□□□□ -0.52
ZKSCAN1-201ENST00000324306 GPS2Q13227 327 aa11.81□□□□□ -0.52
ZKSCAN1-201ENST00000324306 OS9Q13438 667 aaPredicted RBP11.81□□□□□ -0.52
ZKSCAN1-201ENST00000324306 KIAA1211Q6ZU35 1233 aa11.81□□□□□ -0.52
ZKSCAN1-201ENST00000324306 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
ZKSCAN1-201ENST00000324306 NOC3LQ8WTT2 800 aaKnown RBP11.8□□□□□ -0.52
ZKSCAN1-201ENST00000324306 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
ZKSCAN1-201ENST00000324306 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
ZKSCAN1-201ENST00000324306 KANK1Q14678 1352 aa11.79□□□□□ -0.52
ZKSCAN1-201ENST00000324306 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
ZKSCAN1-201ENST00000324306 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
ZKSCAN1-201ENST00000324306 TEX35Q5T0J7 233 aa11.77□□□□□ -0.52
ZKSCAN1-201ENST00000324306 ATP6V1DQ9Y5K8 247 aa11.77□□□□□ -0.52
ZKSCAN1-201ENST00000324306 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
ZKSCAN1-201ENST00000324306 ST18O60284 1047 aa11.77□□□□□ -0.53
ZKSCAN1-201ENST00000324306 CHMP4CQ96CF2 233 aa11.77□□□□□ -0.53
ZKSCAN1-201ENST00000324306 CENPQQ7L2Z9 268 aaPredicted RBP11.76□□□□□ -0.53
ZKSCAN1-201ENST00000324306 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 SLKQ9H2G2 1235 aaPredicted RBP11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 PPP1R15AO75807 674 aaPredicted RBP11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 GZF1Q9H116 711 aaPredicted RBP11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
ZKSCAN1-201ENST00000324306 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
ZKSCAN1-201ENST00000324306 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
ZKSCAN1-201ENST00000324306 KIF15Q9NS87 1388 aa11.74□□□□□ -0.53
ZKSCAN1-201ENST00000324306 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
ZKSCAN1-201ENST00000324306 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
ZKSCAN1-201ENST00000324306 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
ZKSCAN1-201ENST00000324306 CCDC70Q6NSX1 233 aa11.73□□□□□ -0.53
ZKSCAN1-201ENST00000324306 FMN1Q68DA7 1419 aa11.73□□□□□ -0.53
ZKSCAN1-201ENST00000324306 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
ZKSCAN1-201ENST00000324306 HMMRO75330 724 aa11.72□□□□□ -0.53
ZKSCAN1-201ENST00000324306 TPM2P07951 284 aa11.72□□□□□ -0.53
ZKSCAN1-201ENST00000324306 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
ZKSCAN1-201ENST00000324306 TPM3P06753 285 aa11.71□□□□□ -0.54
ZKSCAN1-201ENST00000324306 AAMPQ13685 434 aa11.71□□□□□ -0.54
ZKSCAN1-201ENST00000324306 ZNF771Q7L3S4 317 aaPredicted RBP11.71□□□□□ -0.54
ZKSCAN1-201ENST00000324306 HSPA5P11021 654 aaKnown RBP11.7□□□□□ -0.54
ZKSCAN1-201ENST00000324306 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
ZKSCAN1-201ENST00000324306 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
ZKSCAN1-201ENST00000324306 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
ZKSCAN1-201ENST00000324306 CWC15Q9P013 229 aaKnown RBP11.69□□□□□ -0.54
ZKSCAN1-201ENST00000324306 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
ZKSCAN1-201ENST00000324306 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
ZKSCAN1-201ENST00000324306 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
ZKSCAN1-201ENST00000324306 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
ZKSCAN1-201ENST00000324306 NLRP13Q86W25 1043 aa11.67□□□□□ -0.54
ZKSCAN1-201ENST00000324306 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
ZKSCAN1-201ENST00000324306 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 ACBD3Q9H3P7 528 aa11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 ARID3AQ99856 593 aa11.66□□□□□ -0.54
ZKSCAN1-201ENST00000324306 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
ZKSCAN1-201ENST00000324306 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
ZKSCAN1-201ENST00000324306 PDE4AP27815 886 aa11.65□□□□□ -0.54
ZKSCAN1-201ENST00000324306 MYBBP1AQ9BQG0 1328 aaKnown RBP11.65□□□□□ -0.55
ZKSCAN1-201ENST00000324306 ISY1Q9ULR0 285 aaKnown RBP11.64□□□□□ -0.55
ZKSCAN1-201ENST00000324306 U2SURPO15042 1029 aaKnown RBP11.64□□□□□ -0.55
ZKSCAN1-201ENST00000324306 TPM1P09493 284 aa11.64□□□□□ -0.55
ZKSCAN1-201ENST00000324306 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
ZKSCAN1-201ENST00000324306 PKNOX2Q96KN3 472 aa11.63□□□□□ -0.55
ZKSCAN1-201ENST00000324306 POGKQ9P215 609 aa11.63□□□□□ -0.55
ZKSCAN1-201ENST00000324306 CCDC39Q9UFE4 941 aa11.63□□□□□ -0.55
ZKSCAN1-201ENST00000324306 LMOD3Q0VAK6 560 aa11.63□□□□□ -0.55
ZKSCAN1-201ENST00000324306 GOLGA6L19H0YKK7 550 aa11.62□□□□□ -0.55
ZKSCAN1-201ENST00000324306 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
ZKSCAN1-201ENST00000324306 DIAPH3Q9NSV4 1193 aa11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 DHX8Q14562 1220 aaKnown RBP11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 MRE11P49959 708 aa11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 HMGN5P82970 282 aaKnown RBP11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 TOP2AP11388 1531 aaKnown RBP11.61□□□□□ -0.55
ZKSCAN1-201ENST00000324306 RRP1P56182 461 aaKnown RBP11.6□□□□□ -0.55
ZKSCAN1-201ENST00000324306 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
ZKSCAN1-201ENST00000324306 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
ZKSCAN1-201ENST00000324306 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
ZKSCAN1-201ENST00000324306 CCDC18Q5T9S5 1454 aa11.6□□□□□ -0.55
ZKSCAN1-201ENST00000324306 CUX1P39880 1505 aa11.6□□□□□ -0.55
ZKSCAN1-201ENST00000324306 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
ZKSCAN1-201ENST00000324306 REC8O95072 547 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms