RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
SF3B2-201ENST00000322535 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
SF3B2-201ENST00000322535 CARMIL2Q6F5E8 1435 aa14.27□□□□□ -0.12
SF3B2-201ENST00000322535 CHIC2Q9UKJ5 165 aa14.27□□□□□ -0.12
SF3B2-201ENST00000322535 EPRSP07814 1512 aaKnown RBP14.26□□□□□ -0.13
SF3B2-201ENST00000322535 KLHL34Q8N239 644 aa14.25□□□□□ -0.13
SF3B2-201ENST00000322535 RBM10P98175 930 aaKnown RBP14.25□□□□□ -0.13
SF3B2-201ENST00000322535 AAMPQ13685 434 aa14.25□□□□□ -0.13
SF3B2-201ENST00000322535 ZNF777Q9ULD5 760 aaPredicted RBP14.25□□□□□ -0.13
SF3B2-201ENST00000322535 PTPRGP23470 1445 aa14.24□□□□□ -0.13
SF3B2-201ENST00000322535 NUP153P49790 1475 aaKnown RBP14.24□□□□□ -0.13
SF3B2-201ENST00000322535 RTL5Q5HYW3 569 aaPredicted RBP14.23□□□□□ -0.13
SF3B2-201ENST00000322535 ZNF644Q9H582 1327 aaPredicted RBP14.23□□□□□ -0.13
SF3B2-201ENST00000322535 CFAP43Q8NDM7 1665 aa14.22□□□□□ -0.13
SF3B2-201ENST00000322535 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
SF3B2-201ENST00000322535 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
SF3B2-201ENST00000322535 GLIPR1L2Q4G1C9 344 aa14.21□□□□□ -0.13
SF3B2-201ENST00000322535 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.14
SF3B2-201ENST00000322535 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
SF3B2-201ENST00000322535 MAP3K1Q13233 1512 aa14.19□□□□□ -0.14
SF3B2-201ENST00000322535 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
SF3B2-201ENST00000322535 RAPGEF6Q8TEU7 1601 aa14.18□□□□□ -0.14
SF3B2-201ENST00000322535 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
SF3B2-201ENST00000322535 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
SF3B2-201ENST00000322535 PLEKHD1A6NEE1 506 aa14.17□□□□□ -0.14
SF3B2-201ENST00000322535 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
SF3B2-201ENST00000322535 CCDC18Q5T9S5 1454 aa14.14□□□□□ -0.15
SF3B2-201ENST00000322535 ATP10BO94823 1461 aa14.13□□□□□ -0.15
SF3B2-201ENST00000322535 PTPRKQ15262 1439 aa14.13□□□□□ -0.15
SF3B2-201ENST00000322535 MYOM3Q5VTT5 1437 aa14.12□□□□□ -0.15
SF3B2-201ENST00000322535 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
SF3B2-201ENST00000322535 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
SF3B2-201ENST00000322535 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
SF3B2-201ENST00000322535 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
SF3B2-201ENST00000322535 BRPF3Q9ULD4 1205 aa14.11□□□□□ -0.15
SF3B2-201ENST00000322535 SUPT6HQ7KZ85 1726 aaKnown RBP14.1□□□□□ -0.15
SF3B2-201ENST00000322535 UACAQ9BZF9 1416 aa14.08□□□□□ -0.16
SF3B2-201ENST00000322535 KIF14Q15058 1648 aa14.08□□□□□ -0.16
SF3B2-201ENST00000322535 RSPH6AQ9H0K4 717 aa14.07□□□□□ -0.16
SF3B2-201ENST00000322535 CLASP1Q7Z460 1538 aa14.06□□□□□ -0.16
SF3B2-201ENST00000322535 ABCA8O94911 1581 aa14.06□□□□□ -0.16
SF3B2-201ENST00000322535 TROQ12816 1431 aaPredicted RBP14.06□□□□□ -0.16
SF3B2-201ENST00000322535 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
SF3B2-201ENST00000322535 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
SF3B2-201ENST00000322535 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.165e-6■■■■□ 20.8
SF3B2-201ENST00000322535 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
SF3B2-201ENST00000322535 CYB5RLQ6IPT4 315 aa14.04□□□□□ -0.16
SF3B2-201ENST00000322535 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
SF3B2-201ENST00000322535 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
SF3B2-201ENST00000322535 SETD5Q9C0A6 1442 aa14.03□□□□□ -0.16
SF3B2-201ENST00000322535 PTPN23Q9H3S7 1636 aa14.03□□□□□ -0.16
SF3B2-201ENST00000322535 FOXD1Q16676 465 aa14.01□□□□□ -0.17
SF3B2-201ENST00000322535 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
SF3B2-201ENST00000322535 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
SF3B2-201ENST00000322535 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
SF3B2-201ENST00000322535 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
SF3B2-201ENST00000322535 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
SF3B2-201ENST00000322535 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
SF3B2-201ENST00000322535 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
SF3B2-201ENST00000322535 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
SF3B2-201ENST00000322535 WASHC2CQ9Y4E1 1318 aa13.94□□□□□ -0.18
SF3B2-201ENST00000322535 ABCC5O15440 1437 aa13.94□□□□□ -0.18
SF3B2-201ENST00000322535 NAIPQ13075 1403 aa13.94□□□□□ -0.18
SF3B2-201ENST00000322535 NEFMP07197 916 aa13.93□□□□□ -0.18
SF3B2-201ENST00000322535 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
SF3B2-201ENST00000322535 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
SF3B2-201ENST00000322535 TAF7LQ5H9L4 462 aa13.93□□□□□ -0.18
SF3B2-201ENST00000322535 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
SF3B2-201ENST00000322535 DAPK1P53355 1430 aa13.92□□□□□ -0.18
SF3B2-201ENST00000322535 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
SF3B2-201ENST00000322535 NPM2Q86SE8 214 aaKnown RBP13.91□□□□□ -0.18
SF3B2-201ENST00000322535 KDM6BO15054 1643 aa13.91□□□□□ -0.18
SF3B2-201ENST00000322535 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
SF3B2-201ENST00000322535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
SF3B2-201ENST00000322535 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
SF3B2-201ENST00000322535 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
SF3B2-201ENST00000322535 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.18
SF3B2-201ENST00000322535 ADCY10Q96PN6 1610 aa13.9□□□□□ -0.18
SF3B2-201ENST00000322535 IPO9Q96P70 1041 aaKnown RBP13.9□□□□□ -0.18
SF3B2-201ENST00000322535 PPP4R2Q9NY27 417 aa13.9□□□□□ -0.18
SF3B2-201ENST00000322535 ANP32CO43423 234 aa13.89□□□□□ -0.19
SF3B2-201ENST00000322535 TTC37Q6PGP7 1564 aa13.89□□□□□ -0.19
SF3B2-201ENST00000322535 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
SF3B2-201ENST00000322535 HFM1A2PYH4 1435 aa13.89□□□□□ -0.19
SF3B2-201ENST00000322535 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
SF3B2-201ENST00000322535 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
SF3B2-201ENST00000322535 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
SF3B2-201ENST00000322535 AFAP1Q8N556 730 aa13.87□□□□□ -0.19
SF3B2-201ENST00000322535 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
SF3B2-201ENST00000322535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
SF3B2-201ENST00000322535 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
SF3B2-201ENST00000322535 HSP90AA2PQ14568 343 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-201ENST00000322535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.192e-10■■■□□ 18.7
SF3B2-201ENST00000322535 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
SF3B2-201ENST00000322535 ASXL2Q76L83 1435 aa13.84□□□□□ -0.19
SF3B2-201ENST00000322535 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
SF3B2-201ENST00000322535 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
SF3B2-201ENST00000322535 CDC42BPBQ9Y5S2 1711 aa13.82□□□□□ -0.2
SF3B2-201ENST00000322535 EFCAB2Q5VUJ9 269 aa13.81□□□□□ -0.2
SF3B2-201ENST00000322535 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms