RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 LMTK3Q96Q04 1460 aa23.54■■□□□ 1.36
RPP40-201ENST00000319533 SIGLEC1Q9BZZ2 1709 aa23.53■■□□□ 1.36
RPP40-201ENST00000319533 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
RPP40-201ENST00000319533 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
RPP40-201ENST00000319533 EFCAB2Q5VUJ9 269 aa23.51■■□□□ 1.35
RPP40-201ENST00000319533 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
RPP40-201ENST00000319533 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
RPP40-201ENST00000319533 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
RPP40-201ENST00000319533 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
RPP40-201ENST00000319533 KIF14Q15058 1648 aa23.48■■□□□ 1.35
RPP40-201ENST00000319533 ATP10AO60312 1499 aa23.46■■□□□ 1.35
RPP40-201ENST00000319533 LRRIQ1Q96JM4 1722 aa23.44■■□□□ 1.34
RPP40-201ENST00000319533 FBXO41Q8TF61 875 aa23.43■■□□□ 1.34
RPP40-201ENST00000319533 CLIP1P30622 1438 aa23.42■■□□□ 1.34
RPP40-201ENST00000319533 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
RPP40-201ENST00000319533 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
RPP40-201ENST00000319533 ZNF518AQ6AHZ1 1483 aa23.41■■□□□ 1.34
RPP40-201ENST00000319533 KDM5CP41229 1560 aa23.4■■□□□ 1.34
RPP40-201ENST00000319533 FER1L4A9Z1Z3 1794 aa23.39■■□□□ 1.33
RPP40-201ENST00000319533 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
RPP40-201ENST00000319533 MLECQ14165 292 aa23.38■■□□□ 1.33
RPP40-201ENST00000319533 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
RPP40-201ENST00000319533 AFAP1Q8N556 730 aa23.36■■□□□ 1.33
RPP40-201ENST00000319533 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
RPP40-201ENST00000319533 CDC42BPBQ9Y5S2 1711 aa23.34■■□□□ 1.33
RPP40-201ENST00000319533 HSPA2P54652 639 aa23.34■■□□□ 1.33
RPP40-201ENST00000319533 REREQ9P2R6 1566 aa23.32■■□□□ 1.32
RPP40-201ENST00000319533 MLH3Q9UHC1 1453 aa23.32■■□□□ 1.32
RPP40-201ENST00000319533 PREX2Q70Z35 1606 aa23.31■■□□□ 1.32
RPP40-201ENST00000319533 PLPPR3Q6T4P5 718 aa23.31■■□□□ 1.32
RPP40-201ENST00000319533 DIP2CQ9Y2E4 1556 aa23.3■■□□□ 1.32
RPP40-201ENST00000319533 ABCC1P33527 1531 aa23.28■■□□□ 1.32
RPP40-201ENST00000319533 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.32
RPP40-201ENST00000319533 TRAPPC8Q9Y2L5 1435 aa23.26■■□□□ 1.31
RPP40-201ENST00000319533 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
RPP40-201ENST00000319533 AGLP35573 1532 aa23.24■■□□□ 1.31
RPP40-201ENST00000319533 PREX1Q8TCU6 1659 aa23.24■■□□□ 1.31
RPP40-201ENST00000319533 ITSN2Q9NZM3 1697 aa23.23■■□□□ 1.31
RPP40-201ENST00000319533 CEBPAP49715 358 aaPredicted RBP23.23■■□□□ 1.31
RPP40-201ENST00000319533 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
RPP40-201ENST00000319533 MYT1LQ9UL68 1186 aa23.2■■□□□ 1.3
RPP40-201ENST00000319533 SETD1BQ9UPS6 1966 aaKnown RBP23.19■■□□□ 1.3
RPP40-201ENST00000319533 KIDINS220Q9ULH0 1771 aa23.18■■□□□ 1.3
RPP40-201ENST00000319533 GPATCH8Q9UKJ3 1502 aaKnown RBP23.16■■□□□ 1.3
RPP40-201ENST00000319533 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
RPP40-201ENST00000319533 CERKQ8TCT0 537 aa23.14■■□□□ 1.29
RPP40-201ENST00000319533 SAMD9LQ8IVG5 1584 aa23.14■■□□□ 1.29
RPP40-201ENST00000319533 C3P01024 1663 aa23.13■■□□□ 1.29
RPP40-201ENST00000319533 STRCQ7RTU9 1775 aa23.12■■□□□ 1.29
RPP40-201ENST00000319533 CNTLNQ9NXG0 1405 aa23.1■■□□□ 1.29
RPP40-201ENST00000319533 KIAA1107Q9UPP5 1409 aa23.1■■□□□ 1.29
RPP40-201ENST00000319533 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
RPP40-201ENST00000319533 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
RPP40-201ENST00000319533 FOXD1Q16676 465 aa23.09■■□□□ 1.29
RPP40-201ENST00000319533 ZNF777Q9ULD5 760 aaPredicted RBP23.08■■□□□ 1.29
RPP40-201ENST00000319533 PLEKHH2Q8IVE3 1493 aa23.07■■□□□ 1.28
RPP40-201ENST00000319533 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
RPP40-201ENST00000319533 SPAG9O60271 1321 aaKnown RBP23.07■■□□□ 1.28
RPP40-201ENST00000319533 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
RPP40-201ENST00000319533 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
RPP40-201ENST00000319533 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
RPP40-201ENST00000319533 PTPRTO14522 1441 aa23.03■■□□□ 1.28
RPP40-201ENST00000319533 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
RPP40-201ENST00000319533 ATP7AQ04656 1500 aa23.03■■□□□ 1.28
RPP40-201ENST00000319533 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
RPP40-201ENST00000319533 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
RPP40-201ENST00000319533 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
RPP40-201ENST00000319533 NPATQ14207 1427 aa23.01■■□□□ 1.27
RPP40-201ENST00000319533 ZMYM3Q14202 1370 aa22.99■■□□□ 1.27
RPP40-201ENST00000319533 A2MP01023 1474 aa22.98■■□□□ 1.27
RPP40-201ENST00000319533 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
RPP40-201ENST00000319533 NCOA1Q15788 1441 aa22.96■■□□□ 1.27
RPP40-201ENST00000319533 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
RPP40-201ENST00000319533 EHBP1L1Q8N3D4 1523 aa22.94■■□□□ 1.26
RPP40-201ENST00000319533 MBD5Q9P267 1494 aa22.94■■□□□ 1.26
RPP40-201ENST00000319533 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
RPP40-201ENST00000319533 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
RPP40-201ENST00000319533 ZNF644Q9H582 1327 aaPredicted RBP22.91■■□□□ 1.26
RPP40-201ENST00000319533 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
RPP40-201ENST00000319533 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
RPP40-201ENST00000319533 CLTCQ00610 1675 aaKnown RBP22.9■■□□□ 1.26
RPP40-201ENST00000319533 LTBP4Q8N2S1 1624 aa22.9■■□□□ 1.26
RPP40-201ENST00000319533 CAMSAP1Q5T5Y3 1602 aa22.88■■□□□ 1.25
RPP40-201ENST00000319533 PTPRKQ15262 1439 aa22.88■■□□□ 1.25
RPP40-201ENST00000319533 GGT6Q6P531 493 aa22.86■■□□□ 1.25
RPP40-201ENST00000319533 ZNF142P52746 1687 aaPredicted RBP22.85■■□□□ 1.25
RPP40-201ENST00000319533 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
RPP40-201ENST00000319533 DHX29Q7Z478 1369 aaKnown RBP22.84■■□□□ 1.25
RPP40-201ENST00000319533 MYO3AQ8NEV4 1616 aa22.83■■□□□ 1.25
RPP40-201ENST00000319533 PLA2R1Q13018 1463 aa22.82■■□□□ 1.24
RPP40-201ENST00000319533 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
RPP40-201ENST00000319533 CEP170BQ9Y4F5 1589 aaPredicted RBP22.8■■□□□ 1.24
RPP40-201ENST00000319533 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
RPP40-201ENST00000319533 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
RPP40-201ENST00000319533 NCKAP5LQ9HCH0 1330 aa22.79■■□□□ 1.24
RPP40-201ENST00000319533 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
RPP40-201ENST00000319533 PKD2Q13563 968 aa22.78■■□□□ 1.24
RPP40-201ENST00000319533 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
RPP40-201ENST00000319533 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
RPP40-201ENST00000319533 A2ML1A8K2U0 1454 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms