RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 NPHP1O15259 732 aa23.07■■□□□ 1.28
MINDY2-201ENST00000316848 HDGFL2Q7Z4V5 671 aaPredicted RBP23.07■■□□□ 1.28
MINDY2-201ENST00000316848 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
MINDY2-201ENST00000316848 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
MINDY2-201ENST00000316848 DNTTIP2Q5QJE6 756 aaKnown RBP23.05■■□□□ 1.28
MINDY2-201ENST00000316848 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
MINDY2-201ENST00000316848 SOX12O15370 315 aa23.05■■□□□ 1.28
MINDY2-201ENST00000316848 NUP155O75694 1391 aa23.04■■□□□ 1.28
MINDY2-201ENST00000316848 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
MINDY2-201ENST00000316848 ANKRD30AQ9BXX3 1397 aa23.04■■□□□ 1.28
MINDY2-201ENST00000316848 TPRNQ4KMQ1 711 aa23.03■■□□□ 1.28
MINDY2-201ENST00000316848 RTF1Q92541 710 aaKnown RBP23.03■■□□□ 1.28
MINDY2-201ENST00000316848 TDRD9Q8NDG6 1382 aaKnown RBP23.03■■□□□ 1.28
MINDY2-201ENST00000316848 IPO8O15397 1037 aaKnown RBP23.02■■□□□ 1.28
MINDY2-201ENST00000316848 FOXD1Q16676 465 aa23.02■■□□□ 1.28
MINDY2-201ENST00000316848 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
MINDY2-201ENST00000316848 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
MINDY2-201ENST00000316848 RALBP1Q15311 655 aa23.01■■□□□ 1.27
MINDY2-201ENST00000316848 STK26Q9P289 416 aa23.01■■□□□ 1.27
MINDY2-201ENST00000316848 HSCBQ8IWL3 235 aa23.01■■□□□ 1.27
MINDY2-201ENST00000316848 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
MINDY2-201ENST00000316848 CALD1Q05682 793 aaKnown RBP22.99■■□□□ 1.27
MINDY2-201ENST00000316848 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
MINDY2-201ENST00000316848 MCCP23508 829 aa22.98■■□□□ 1.27
MINDY2-201ENST00000316848 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
MINDY2-201ENST00000316848 PLCB2Q00722 1185 aa22.97■■□□□ 1.27
MINDY2-201ENST00000316848 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
MINDY2-201ENST00000316848 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
MINDY2-201ENST00000316848 GOLGA6L4A6NEF3 574 aa22.95■■□□□ 1.26
MINDY2-201ENST00000316848 RSPH4AQ5TD94 716 aa22.95■■□□□ 1.26
MINDY2-201ENST00000316848 NRDCO43847 1150 aa22.94■■□□□ 1.26
MINDY2-201ENST00000316848 NAP1L2Q9ULW6 460 aaPredicted RBP22.93■■□□□ 1.26
MINDY2-201ENST00000316848 GOLGA6L6A8MZA4 724 aa22.92■■□□□ 1.26
MINDY2-201ENST00000316848 RCAN3Q9UKA8 241 aa22.92■■□□□ 1.26
MINDY2-201ENST00000316848 CHMP4AQ9BY43 222 aa22.92■■□□□ 1.26
MINDY2-201ENST00000316848 EIF3AQ14152 1382 aaKnown RBP22.9■■□□□ 1.26
MINDY2-201ENST00000316848 KIF3BO15066 747 aa22.89■■□□□ 1.25
MINDY2-201ENST00000316848 TAOK2Q9UL54 1235 aa22.89■■□□□ 1.25
MINDY2-201ENST00000316848 RWDD1Q9H446 243 aaPredicted RBP22.87■■□□□ 1.25
MINDY2-201ENST00000316848 L3MBTL2Q969R5 705 aa22.86■■□□□ 1.25
MINDY2-201ENST00000316848 TERF2IPQ9NYB0 399 aa22.84■■□□□ 1.25
MINDY2-201ENST00000316848 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
MINDY2-201ENST00000316848 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.25
MINDY2-201ENST00000316848 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
MINDY2-201ENST00000316848 KIAA1211Q6ZU35 1233 aa22.82■■□□□ 1.24
MINDY2-201ENST00000316848 NLRP13Q86W25 1043 aa22.82■■□□□ 1.24
MINDY2-201ENST00000316848 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
MINDY2-201ENST00000316848 NAP1L5Q96NT1 182 aaPredicted RBP22.81■■□□□ 1.24
MINDY2-201ENST00000316848 TULP1O00294 542 aaPredicted RBP22.81■■□□□ 1.24
MINDY2-201ENST00000316848 HNRNPMP52272 730 aaKnown RBP eCLIP22.8■■□□□ 1.24
MINDY2-201ENST00000316848 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
MINDY2-201ENST00000316848 TCERG1O14776 1098 aaKnown RBP22.8■■□□□ 1.24
MINDY2-201ENST00000316848 RBM19Q9Y4C8 960 aaKnown RBP22.79■■□□□ 1.24
MINDY2-201ENST00000316848 L1TD1Q5T7N2 865 aaKnown RBP22.79■■□□□ 1.24
MINDY2-201ENST00000316848 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
MINDY2-201ENST00000316848 APBB1O00213 710 aa22.78■■□□□ 1.24
MINDY2-201ENST00000316848 FHOD3Q2V2M9 1422 aa22.78■■□□□ 1.24
MINDY2-201ENST00000316848 STK31Q9BXU1 1019 aa22.77■■□□□ 1.24
MINDY2-201ENST00000316848 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
MINDY2-201ENST00000316848 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
MINDY2-201ENST00000316848 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
MINDY2-201ENST00000316848 HDAC5Q9UQL6 1122 aa22.76■■□□□ 1.23
MINDY2-201ENST00000316848 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
MINDY2-201ENST00000316848 JPH4Q96JJ6 628 aa22.75■■□□□ 1.23
MINDY2-201ENST00000316848 WASHC2CQ9Y4E1 1318 aa22.75■■□□□ 1.23
MINDY2-201ENST00000316848 SPRYD3Q8NCJ5 442 aa22.72■■□□□ 1.23
MINDY2-201ENST00000316848 SMC4Q9NTJ3 1288 aa22.72■■□□□ 1.23
MINDY2-201ENST00000316848 EID1Q9Y6B2 187 aa22.72■■□□□ 1.23
MINDY2-201ENST00000316848 GBP4Q96PP9 640 aa22.71■■□□□ 1.23
MINDY2-201ENST00000316848 CHAF1AQ13111 956 aaPredicted RBP22.71■■□□□ 1.23
MINDY2-201ENST00000316848 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.22
MINDY2-201ENST00000316848 HMMRO75330 724 aa22.7■■□□□ 1.22
MINDY2-201ENST00000316848 PTMSP20962 102 aa22.7■■□□□ 1.22
MINDY2-201ENST00000316848 LMOD3Q0VAK6 560 aa22.7■■□□□ 1.22
MINDY2-201ENST00000316848 MSNP26038 577 aaKnown RBP22.68■■□□□ 1.22
MINDY2-201ENST00000316848 RTN4Q9NQC3 1192 aaKnown RBP22.67■■□□□ 1.22
MINDY2-201ENST00000316848 GNL2Q13823 731 aaKnown RBP22.67■■□□□ 1.22
MINDY2-201ENST00000316848 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
MINDY2-201ENST00000316848 CENPJQ9HC77 1338 aaPredicted RBP22.65■■□□□ 1.22
MINDY2-201ENST00000316848 ZNF330Q9Y3S2 320 aaPredicted RBP22.65■■□□□ 1.22
MINDY2-201ENST00000316848 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
MINDY2-201ENST00000316848 DRC7Q8IY82 874 aa22.62■■□□□ 1.21
MINDY2-201ENST00000316848 KIF15Q9NS87 1388 aa22.62■■□□□ 1.21
MINDY2-201ENST00000316848 CCDC144AA2RUR9 1427 aa22.61■■□□□ 1.21
MINDY2-201ENST00000316848 WIZO95785 1651 aa22.61■■□□□ 1.21
MINDY2-201ENST00000316848 CLUAP1Q96AJ1 413 aa22.61■■□□□ 1.21
MINDY2-201ENST00000316848 GPATCH3Q96I76 525 aa22.61■■□□□ 1.21
MINDY2-201ENST00000316848 ISY1Q9ULR0 285 aaKnown RBP22.61■■□□□ 1.21
MINDY2-201ENST00000316848 ST20-MTHFSA0A0A6YYL1 179 aa22.6■■□□□ 1.21
MINDY2-201ENST00000316848 AMPHP49418 695 aa22.6■■□□□ 1.21
MINDY2-201ENST00000316848 TRAK1Q9UPV9 953 aa22.6■■□□□ 1.21
MINDY2-201ENST00000316848 SLKQ9H2G2 1235 aaPredicted RBP22.6■■□□□ 1.21
MINDY2-201ENST00000316848 GORABQ5T7V8 394 aa22.6■■□□□ 1.21
MINDY2-201ENST00000316848 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
MINDY2-201ENST00000316848 DEKP35659 375 aaKnown RBP22.59■■□□□ 1.21
MINDY2-201ENST00000316848 MYBBP1AQ9BQG0 1328 aaKnown RBP22.58■■□□□ 1.21
MINDY2-201ENST00000316848 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
MINDY2-201ENST00000316848 NUTM2DQ5VT03 806 aaPredicted RBP22.57■■□□□ 1.2
MINDY2-201ENST00000316848 SYAP1Q96A49 352 aaPredicted RBP22.57■■□□□ 1.2
MINDY2-201ENST00000316848 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms