RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 KIF14Q15058 1648 aa28.68■■■□□ 2.18
EXOSC4-201ENST00000316052 ZFYVE16Q7Z3T8 1539 aa28.68■■■□□ 2.18
EXOSC4-201ENST00000316052 POGZQ7Z3K3 1410 aa28.67■■■□□ 2.18
EXOSC4-201ENST00000316052 MAGI2Q86UL8 1455 aa28.66■■■□□ 2.18
EXOSC4-201ENST00000316052 TROQ12816 1431 aaPredicted RBP28.66■■■□□ 2.18
EXOSC4-201ENST00000316052 MYO5CQ9NQX4 1742 aa28.66■■■□□ 2.18
EXOSC4-201ENST00000316052 RIMS1Q86UR5 1692 aaKnown RBP28.63■■■□□ 2.17
EXOSC4-201ENST00000316052 MLECQ14165 292 aa28.58■■■□□ 2.17
EXOSC4-201ENST00000316052 CLIP1P30622 1438 aa28.57■■■□□ 2.16
EXOSC4-201ENST00000316052 CASKIN1Q8WXD9 1431 aa28.56■■■□□ 2.16
EXOSC4-201ENST00000316052 ARHGAP5Q13017 1502 aa28.55■■■□□ 2.16
EXOSC4-201ENST00000316052 LMTK3Q96Q04 1460 aa28.55■■■□□ 2.16
EXOSC4-201ENST00000316052 PLPPR3Q6T4P5 718 aa28.55■■■□□ 2.16
EXOSC4-201ENST00000316052 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
EXOSC4-201ENST00000316052 PCF11O94913 1555 aaKnown RBP28.54■■■□□ 2.16
EXOSC4-201ENST00000316052 ATP10AO60312 1499 aa28.54■■■□□ 2.16
EXOSC4-201ENST00000316052 CDC42BPBQ9Y5S2 1711 aa28.51■■■□□ 2.15
EXOSC4-201ENST00000316052 ZNF518AQ6AHZ1 1483 aa28.49■■■□□ 2.15
EXOSC4-201ENST00000316052 C9orf84Q5VXU9 1444 aa28.49■■■□□ 2.15
EXOSC4-201ENST00000316052 CCDC18Q5T9S5 1454 aa28.48■■■□□ 2.15
EXOSC4-201ENST00000316052 FER1L4A9Z1Z3 1794 aa28.46■■■□□ 2.15
EXOSC4-201ENST00000316052 KDM5CP41229 1560 aa28.45■■■□□ 2.15
EXOSC4-201ENST00000316052 HSPA2P54652 639 aa28.45■■■□□ 2.14
EXOSC4-201ENST00000316052 ARHGEF12Q9NZN5 1544 aa28.43■■■□□ 2.14
EXOSC4-201ENST00000316052 FYCO1Q9BQS8 1478 aa28.41■■■□□ 2.14
EXOSC4-201ENST00000316052 PREX2Q70Z35 1606 aa28.41■■■□□ 2.14
EXOSC4-201ENST00000316052 MYT1LQ9UL68 1186 aa28.41■■■□□ 2.14
EXOSC4-201ENST00000316052 TRAPPC8Q9Y2L5 1435 aa28.4■■■□□ 2.14
EXOSC4-201ENST00000316052 CEBPAP49715 358 aaPredicted RBP28.37■■■□□ 2.13
EXOSC4-201ENST00000316052 CDC42BPAQ5VT25 1732 aa28.37■■■□□ 2.13
EXOSC4-201ENST00000316052 DIP2CQ9Y2E4 1556 aa28.37■■■□□ 2.13
EXOSC4-201ENST00000316052 MLH3Q9UHC1 1453 aa28.36■■■□□ 2.13
EXOSC4-201ENST00000316052 ABCC1P33527 1531 aa28.36■■■□□ 2.13
EXOSC4-201ENST00000316052 ABCA6Q8N139 1617 aa28.33■■■□□ 2.13
EXOSC4-201ENST00000316052 FBXO41Q8TF61 875 aa28.33■■■□□ 2.13
EXOSC4-201ENST00000316052 ITSN2Q9NZM3 1697 aa28.32■■■□□ 2.12
EXOSC4-201ENST00000316052 REREQ9P2R6 1566 aa28.3■■■□□ 2.12
EXOSC4-201ENST00000316052 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
EXOSC4-201ENST00000316052 GPATCH8Q9UKJ3 1502 aaKnown RBP28.28■■■□□ 2.12
EXOSC4-201ENST00000316052 KIDINS220Q9ULH0 1771 aa28.27■■■□□ 2.12
EXOSC4-201ENST00000316052 SAMD9LQ8IVG5 1584 aa28.24■■■□□ 2.11
EXOSC4-201ENST00000316052 SETD1BQ9UPS6 1966 aaKnown RBP28.23■■■□□ 2.11
EXOSC4-201ENST00000316052 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.11
EXOSC4-201ENST00000316052 AGLP35573 1532 aa28.23■■■□□ 2.11
EXOSC4-201ENST00000316052 PREX1Q8TCU6 1659 aa28.22■■■□□ 2.11
EXOSC4-201ENST00000316052 SYCP2Q9BX26 1530 aa28.19■■■□□ 2.1
EXOSC4-201ENST00000316052 CFDP1Q9UEE9 299 aaPredicted RBP28.18■■■□□ 2.1
EXOSC4-201ENST00000316052 SPAG9O60271 1321 aaKnown RBP28.17■■■□□ 2.1
EXOSC4-201ENST00000316052 MTUS2Q5JR59 1369 aa28.16■■■□□ 2.1
EXOSC4-201ENST00000316052 CCNB3Q8WWL7 1395 aa28.16■■■□□ 2.1
EXOSC4-201ENST00000316052 C3P01024 1663 aa28.15■■■□□ 2.1
EXOSC4-201ENST00000316052 KIAA1107Q9UPP5 1409 aa28.14■■■□□ 2.1
EXOSC4-201ENST00000316052 ESF1Q9H501 851 aaKnown RBP28.13■■■□□ 2.09
EXOSC4-201ENST00000316052 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
EXOSC4-201ENST00000316052 CEP162Q5TB80 1403 aa28.09■■■□□ 2.09
EXOSC4-201ENST00000316052 STRCQ7RTU9 1775 aa28.09■■■□□ 2.09
EXOSC4-201ENST00000316052 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
EXOSC4-201ENST00000316052 PLEKHH2Q8IVE3 1493 aa28.08■■■□□ 2.09
EXOSC4-201ENST00000316052 CERKQ8TCT0 537 aa28.08■■■□□ 2.09
EXOSC4-201ENST00000316052 ATP7AQ04656 1500 aa28.07■■■□□ 2.08
EXOSC4-201ENST00000316052 CNTLNQ9NXG0 1405 aa28.06■■■□□ 2.08
EXOSC4-201ENST00000316052 SUPT6HQ7KZ85 1726 aaKnown RBP28.06■■■□□ 2.08
EXOSC4-201ENST00000316052 TIAM1Q13009 1591 aa28.04■■■□□ 2.08
EXOSC4-201ENST00000316052 INO80Q9ULG1 1556 aaPredicted RBP28.03■■■□□ 2.08
EXOSC4-201ENST00000316052 DMRT2Q9Y5R5 561 aa28.02■■■□□ 2.08
EXOSC4-201ENST00000316052 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
EXOSC4-201ENST00000316052 A2MP01023 1474 aa28.01■■■□□ 2.07
EXOSC4-201ENST00000316052 ZMYM3Q14202 1370 aa27.99■■■□□ 2.07
EXOSC4-201ENST00000316052 PLXNC1O60486 1568 aa27.99■■■□□ 2.07
EXOSC4-201ENST00000316052 MBD5Q9P267 1494 aa27.99■■■□□ 2.07
EXOSC4-201ENST00000316052 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
EXOSC4-201ENST00000316052 GGT6Q6P531 493 aa27.95■■■□□ 2.06
EXOSC4-201ENST00000316052 LOC105371045A0A1W2PR82 267 aa27.94■■■□□ 2.06
EXOSC4-201ENST00000316052 NPATQ14207 1427 aa27.93■■■□□ 2.06
EXOSC4-201ENST00000316052 CLTCQ00610 1675 aaKnown RBP27.92■■■□□ 2.06
EXOSC4-201ENST00000316052 PTPRTO14522 1441 aa27.91■■■□□ 2.06
EXOSC4-201ENST00000316052 ADGBQ8N7X0 1667 aa27.91■■■□□ 2.06
EXOSC4-201ENST00000316052 NCOA2Q15596 1464 aa27.9■■■□□ 2.06
EXOSC4-201ENST00000316052 RTEL1-TNFRSF6BF6WH68 1400 aa27.88■■■□□ 2.05
EXOSC4-201ENST00000316052 NCOA1Q15788 1441 aa27.88■■■□□ 2.05
EXOSC4-201ENST00000316052 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
EXOSC4-201ENST00000316052 PTPRKQ15262 1439 aa27.85■■■□□ 2.05
EXOSC4-201ENST00000316052 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
EXOSC4-201ENST00000316052 CAMSAP1Q5T5Y3 1602 aa27.83■■■□□ 2.05
EXOSC4-201ENST00000316052 CAMSAP2Q08AD1 1489 aa27.83■■■□□ 2.04
EXOSC4-201ENST00000316052 CCDC141Q6ZP82 1450 aa27.81■■■□□ 2.04
EXOSC4-201ENST00000316052 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
EXOSC4-201ENST00000316052 NCKAP5LQ9HCH0 1330 aa27.79■■■□□ 2.04
EXOSC4-201ENST00000316052 RSPH4AQ5TD94 716 aa27.79■■■□□ 2.04
EXOSC4-201ENST00000316052 KIF3BO15066 747 aa27.78■■■□□ 2.04
EXOSC4-201ENST00000316052 MYO3AQ8NEV4 1616 aa27.77■■■□□ 2.04
EXOSC4-201ENST00000316052 LTBP4Q8N2S1 1624 aa27.76■■■□□ 2.03
EXOSC4-201ENST00000316052 LRRC9Q6ZRR7 1453 aa27.76■■■□□ 2.03
EXOSC4-201ENST00000316052 KANK4Q5T7N3 995 aaPredicted RBP27.74■■■□□ 2.03
EXOSC4-201ENST00000316052 ZNF142P52746 1687 aaPredicted RBP27.74■■■□□ 2.03
EXOSC4-201ENST00000316052 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
EXOSC4-201ENST00000316052 ARHGEF5Q12774 1597 aa27.71■■■□□ 2.03
EXOSC4-201ENST00000316052 TSPY4P0CV99 314 aa27.7■■■□□ 2.02
EXOSC4-201ENST00000316052 TSPY10P0CW01 314 aa27.7■■■□□ 2.02
EXOSC4-201ENST00000316052 FBXO31Q5XUX0 539 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms