RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
SKA3-202ENST00000314759 NBPF8Q3BBV2 869 aa18.47■□□□□ 0.55
SKA3-202ENST00000314759 MRS2Q9HD23 443 aa18.47■□□□□ 0.55
SKA3-202ENST00000314759 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
SKA3-202ENST00000314759 ZBED9Q6R2W3 1325 aa18.45■□□□□ 0.54
SKA3-202ENST00000314759 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
SKA3-202ENST00000314759 ARID3CA6NKF2 412 aa18.43■□□□□ 0.54
SKA3-202ENST00000314759 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
SKA3-202ENST00000314759 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
SKA3-202ENST00000314759 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
SKA3-202ENST00000314759 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
SKA3-202ENST00000314759 TEX14Q8IWB6 1497 aa18.41■□□□□ 0.54
SKA3-202ENST00000314759 DEKP35659 375 aaKnown RBP18.39■□□□□ 0.53
SKA3-202ENST00000314759 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
SKA3-202ENST00000314759 ROCK1Q13464 1354 aa18.38■□□□□ 0.53
SKA3-202ENST00000314759 DAPK1P53355 1430 aa18.38■□□□□ 0.53
SKA3-202ENST00000314759 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
SKA3-202ENST00000314759 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
SKA3-202ENST00000314759 WDR62O43379 1518 aa18.37■□□□□ 0.53
SKA3-202ENST00000314759 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
SKA3-202ENST00000314759 ABCC5O15440 1437 aa18.35■□□□□ 0.53
SKA3-202ENST00000314759 ZNF644Q9H582 1327 aaPredicted RBP18.35■□□□□ 0.53
SKA3-202ENST00000314759 DNMT1P26358 1616 aaKnown RBP18.31■□□□□ 0.52
SKA3-202ENST00000314759 POLR1AO95602 1720 aaPredicted RBP18.31■□□□□ 0.52
SKA3-202ENST00000314759 PBRM1Q86U86 1689 aa18.29■□□□□ 0.52
SKA3-202ENST00000314759 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
SKA3-202ENST00000314759 DNAJC5BQ9UF47 199 aa18.29■□□□□ 0.52
SKA3-202ENST00000314759 NBR1Q14596 966 aa18.29■□□□□ 0.52
SKA3-202ENST00000314759 DHX29Q7Z478 1369 aaKnown RBP18.29■□□□□ 0.52
SKA3-202ENST00000314759 ADAMTS12P58397 1594 aa18.28■□□□□ 0.52
SKA3-202ENST00000314759 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
SKA3-202ENST00000314759 SMG6Q86US8 1419 aaKnown RBP18.27■□□□□ 0.52
SKA3-202ENST00000314759 PZPP20742 1482 aa18.26■□□□□ 0.51
SKA3-202ENST00000314759 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
SKA3-202ENST00000314759 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
SKA3-202ENST00000314759 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
SKA3-202ENST00000314759 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
SKA3-202ENST00000314759 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
SKA3-202ENST00000314759 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
SKA3-202ENST00000314759 USP47Q96K76 1375 aa18.22■□□□□ 0.51
SKA3-202ENST00000314759 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
SKA3-202ENST00000314759 BCORL1Q5H9F3 1711 aa18.21■□□□□ 0.51
SKA3-202ENST00000314759 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
SKA3-202ENST00000314759 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
SKA3-202ENST00000314759 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
SKA3-202ENST00000314759 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
SKA3-202ENST00000314759 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
SKA3-202ENST00000314759 SENP3-EIF4A1A0A087X0R7 540 aa18.16■□□□□ 0.5
SKA3-202ENST00000314759 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
SKA3-202ENST00000314759 PKD2Q13563 968 aa18.16■□□□□ 0.5
SKA3-202ENST00000314759 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
SKA3-202ENST00000314759 ARID4BQ4LE39 1312 aaPredicted RBP18.16■□□□□ 0.5
SKA3-202ENST00000314759 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SKA3-202ENST00000314759 PRG4Q92954 1404 aaPredicted RBP18.16■□□□□ 0.5
SKA3-202ENST00000314759 KIAA0586Q9BVV6 1533 aa18.15■□□□□ 0.5
SKA3-202ENST00000314759 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
SKA3-202ENST00000314759 KDM5CP41229 1560 aa18.14■□□□□ 0.49
SKA3-202ENST00000314759 PRKCSHP14314 528 aaPredicted RBP18.12■□□□□ 0.49
SKA3-202ENST00000314759 TROQ12816 1431 aaPredicted RBP18.12■□□□□ 0.49
SKA3-202ENST00000314759 KIF14Q15058 1648 aa18.12■□□□□ 0.49
SKA3-202ENST00000314759 TMC1Q8TDI8 760 aa18.12■□□□□ 0.49
SKA3-202ENST00000314759 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
SKA3-202ENST00000314759 GPATCH8Q9UKJ3 1502 aaKnown RBP18.11■□□□□ 0.49
SKA3-202ENST00000314759 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
SKA3-202ENST00000314759 ZNF608Q9ULD9 1512 aaPredicted RBP18.11■□□□□ 0.49
SKA3-202ENST00000314759 ADGRL2O95490 1459 aa18.1■□□□□ 0.49
SKA3-202ENST00000314759 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
SKA3-202ENST00000314759 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
SKA3-202ENST00000314759 UHRF1BP1Q6BDS2 1440 aa18.09■□□□□ 0.49
SKA3-202ENST00000314759 IPO9Q96P70 1041 aaKnown RBP18.08■□□□□ 0.48
SKA3-202ENST00000314759 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.48
SKA3-202ENST00000314759 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.48
SKA3-202ENST00000314759 RALGAPBQ86X10 1494 aa18.07■□□□□ 0.48
SKA3-202ENST00000314759 ANKRD50Q9ULJ7 1429 aa18.07■□□□□ 0.48
SKA3-202ENST00000314759 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
SKA3-202ENST00000314759 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
SKA3-202ENST00000314759 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
SKA3-202ENST00000314759 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
SKA3-202ENST00000314759 ANP32AP39687 249 aaKnown RBP18.05■□□□□ 0.48
SKA3-202ENST00000314759 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
SKA3-202ENST00000314759 PLB1Q6P1J6 1458 aa18.04■□□□□ 0.48
SKA3-202ENST00000314759 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
SKA3-202ENST00000314759 NUP155O75694 1391 aa18.03■□□□□ 0.48
SKA3-202ENST00000314759 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
SKA3-202ENST00000314759 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
SKA3-202ENST00000314759 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
SKA3-202ENST00000314759 MYBBP1AQ9BQG0 1328 aaKnown RBP18.02■□□□□ 0.48
SKA3-202ENST00000314759 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.48
SKA3-202ENST00000314759 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.47
SKA3-202ENST00000314759 RALBP1Q15311 655 aa18■□□□□ 0.47
SKA3-202ENST00000314759 ADCY10Q96PN6 1610 aa18■□□□□ 0.47
SKA3-202ENST00000314759 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
SKA3-202ENST00000314759 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
SKA3-202ENST00000314759 KTN1Q86UP2 1357 aaKnown RBP17.99■□□□□ 0.47
SKA3-202ENST00000314759 RRP1P56182 461 aaKnown RBP17.99■□□□□ 0.47
SKA3-202ENST00000314759 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
SKA3-202ENST00000314759 IL27Q8NEV9 243 aa17.98■□□□□ 0.47
SKA3-202ENST00000314759 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
SKA3-202ENST00000314759 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
SKA3-202ENST00000314759 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms