RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 PREX2Q70Z35 1606 aa27.08■■□□□ 1.93
PUF60-201ENST00000313352 CFAP74Q9C0B2 1584 aa27.08■■□□□ 1.93
PUF60-201ENST00000313352 GPATCH8Q9UKJ3 1502 aaKnown RBP27.07■■□□□ 1.92
PUF60-201ENST00000313352 ADGRL1O94910 1474 aa27.07■■□□□ 1.92
PUF60-201ENST00000313352 SCAPERQ9BY12 1400 aa27.05■■□□□ 1.92
PUF60-201ENST00000313352 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
PUF60-201ENST00000313352 DENND4BO75064 1496 aaPredicted RBP27.04■■□□□ 1.92
PUF60-201ENST00000313352 RICTORQ6R327 1708 aa27.04■■□□□ 1.92
PUF60-201ENST00000313352 ZNF777Q9ULD5 760 aaPredicted RBP27.01■■□□□ 1.91
PUF60-201ENST00000313352 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
PUF60-201ENST00000313352 NCOA2Q15596 1464 aa27■■□□□ 1.91
PUF60-201ENST00000313352 MAP3K1Q13233 1512 aa27■■□□□ 1.91
PUF60-201ENST00000313352 ARHGEF12Q9NZN5 1544 aa26.99■■□□□ 1.91
PUF60-201ENST00000313352 SUPT6HQ7KZ85 1726 aaKnown RBP26.97■■□□□ 1.91
PUF60-201ENST00000313352 POGZQ7Z3K3 1410 aa26.96■■□□□ 1.91
PUF60-201ENST00000313352 SAMD9LQ8IVG5 1584 aa26.96■■□□□ 1.91
PUF60-201ENST00000313352 AFAP1Q8N556 730 aa26.96■■□□□ 1.91
PUF60-201ENST00000313352 CFDP1Q9UEE9 299 aaPredicted RBP26.95■■□□□ 1.91
PUF60-201ENST00000313352 ZNF644Q9H582 1327 aaPredicted RBP26.94■■□□□ 1.9
PUF60-201ENST00000313352 ABCC1P33527 1531 aa26.94■■□□□ 1.9
PUF60-201ENST00000313352 APLP2Q06481 763 aa26.93■■□□□ 1.9
PUF60-201ENST00000313352 TRAPPC8Q9Y2L5 1435 aa26.92■■□□□ 1.9
PUF60-201ENST00000313352 YEATS2Q9ULM3 1422 aa26.91■■□□□ 1.9
PUF60-201ENST00000313352 KDM4FA0A1W2PPD8 638 aa26.89■■□□□ 1.9
PUF60-201ENST00000313352 HNRNPMP52272 730 aaKnown RBP eCLIP26.89■■□□□ 1.97e-7■■■□□ 18.4
PUF60-201ENST00000313352 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.89
PUF60-201ENST00000313352 ZMYM4Q5VZL5 1548 aa26.89■■□□□ 1.89
PUF60-201ENST00000313352 SYCP2Q9BX26 1530 aa26.88■■□□□ 1.89
PUF60-201ENST00000313352 ZNF518AQ6AHZ1 1483 aa26.86■■□□□ 1.89
PUF60-201ENST00000313352 KDM5CP41229 1560 aa26.84■■□□□ 1.89
PUF60-201ENST00000313352 ARHGEF40Q8TER5 1519 aa26.83■■□□□ 1.89
PUF60-201ENST00000313352 ZFYVE16Q7Z3T8 1539 aa26.82■■□□□ 1.88
PUF60-201ENST00000313352 SIGLEC1Q9BZZ2 1709 aa26.82■■□□□ 1.88
PUF60-201ENST00000313352 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
PUF60-201ENST00000313352 KIAA1107Q9UPP5 1409 aa26.78■■□□□ 1.88
PUF60-201ENST00000313352 MYT1LQ9UL68 1186 aa26.78■■□□□ 1.88
PUF60-201ENST00000313352 MAGI2Q86UL8 1455 aa26.78■■□□□ 1.88
PUF60-201ENST00000313352 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
PUF60-201ENST00000313352 CAMSAP2Q08AD1 1489 aa26.76■■□□□ 1.88
PUF60-201ENST00000313352 HECW2Q9P2P5 1572 aa26.76■■□□□ 1.87
PUF60-201ENST00000313352 MYOM3Q5VTT5 1437 aa26.75■■□□□ 1.87
PUF60-201ENST00000313352 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
PUF60-201ENST00000313352 MLH3Q9UHC1 1453 aa26.73■■□□□ 1.87
PUF60-201ENST00000313352 KIDINS220Q9ULH0 1771 aa26.73■■□□□ 1.87
PUF60-201ENST00000313352 ARID4BQ4LE39 1312 aaPredicted RBP26.72■■□□□ 1.87
PUF60-201ENST00000313352 ABCA6Q8N139 1617 aa26.72■■□□□ 1.87
PUF60-201ENST00000313352 DIP2CQ9Y2E4 1556 aa26.71■■□□□ 1.87
PUF60-201ENST00000313352 ATP10AO60312 1499 aa26.7■■□□□ 1.86
PUF60-201ENST00000313352 SPAG9O60271 1321 aaKnown RBP26.68■■□□□ 1.86
PUF60-201ENST00000313352 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
PUF60-201ENST00000313352 C9orf84Q5VXU9 1444 aa26.65■■□□□ 1.86
PUF60-201ENST00000313352 MIA2Q96PC5 1412 aa26.65■■□□□ 1.86
PUF60-201ENST00000313352 MLECQ14165 292 aa26.64■■□□□ 1.85
PUF60-201ENST00000313352 INO80Q9ULG1 1556 aaPredicted RBP26.64■■□□□ 1.85
PUF60-201ENST00000313352 ATP7AQ04656 1500 aa26.64■■□□□ 1.85
PUF60-201ENST00000313352 BCORL1Q5H9F3 1711 aa26.63■■□□□ 1.85
PUF60-201ENST00000313352 FGD6Q6ZV73 1430 aa26.62■■□□□ 1.85
PUF60-201ENST00000313352 CCDC141Q6ZP82 1450 aa26.61■■□□□ 1.85
PUF60-201ENST00000313352 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
PUF60-201ENST00000313352 ADAMTSL3P82987 1691 aa26.6■■□□□ 1.85
PUF60-201ENST00000313352 ARHGEF5Q12774 1597 aa26.59■■□□□ 1.85
PUF60-201ENST00000313352 MADDQ8WXG6 1647 aa26.56■■□□□ 1.84
PUF60-201ENST00000313352 REREQ9P2R6 1566 aa26.54■■□□□ 1.84
PUF60-201ENST00000313352 TCOF1Q13428 1488 aaKnown RBP26.54■■□□□ 1.84
PUF60-201ENST00000313352 RSPH4AQ5TD94 716 aa26.53■■□□□ 1.84
PUF60-201ENST00000313352 RTEL1-TNFRSF6BF6WH68 1400 aa26.52■■□□□ 1.84
PUF60-201ENST00000313352 ABCC5O15440 1437 aa26.5■■□□□ 1.83
PUF60-201ENST00000313352 A2MP01023 1474 aa26.5■■□□□ 1.83
PUF60-201ENST00000313352 TSPY4P0CV99 314 aa26.5■■□□□ 1.83
PUF60-201ENST00000313352 TSPY10P0CW01 314 aa26.5■■□□□ 1.83
PUF60-201ENST00000313352 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
PUF60-201ENST00000313352 ADGBQ8N7X0 1667 aa26.49■■□□□ 1.83
PUF60-201ENST00000313352 PLXNC1O60486 1568 aa26.48■■□□□ 1.83
PUF60-201ENST00000313352 RIMS1Q86UR5 1692 aaKnown RBP26.48■■□□□ 1.83
PUF60-201ENST00000313352 AGLP35573 1532 aa26.47■■□□□ 1.83
PUF60-201ENST00000313352 PTPRMP28827 1452 aa26.46■■□□□ 1.83
PUF60-201ENST00000313352 DAPK1P53355 1430 aa26.46■■□□□ 1.83
PUF60-201ENST00000313352 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
PUF60-201ENST00000313352 DNMT1P26358 1616 aaKnown RBP26.45■■□□□ 1.82
PUF60-201ENST00000313352 MAST1Q9Y2H9 1570 aa26.43■■□□□ 1.82
PUF60-201ENST00000313352 FER1L4A9Z1Z3 1794 aa26.43■■□□□ 1.82
PUF60-201ENST00000313352 CROCC2H7BZ55 1655 aa26.43■■□□□ 1.82
PUF60-201ENST00000313352 CHIC2Q9UKJ5 165 aa26.43■■□□□ 1.82
PUF60-201ENST00000313352 DHX29Q7Z478 1369 aaKnown RBP26.41■■□□□ 1.82
PUF60-201ENST00000313352 GGT6Q6P531 493 aa26.38■■□□□ 1.81
PUF60-201ENST00000313352 CEBPAP49715 358 aaPredicted RBP26.37■■□□□ 1.81
PUF60-201ENST00000313352 PTPRKQ15262 1439 aa26.37■■□□□ 1.81
PUF60-201ENST00000313352 RRP7BPQ9NSQ0 103 aa26.37■■□□□ 1.81
PUF60-201ENST00000313352 SHANK2Q9UPX8 1470 aa26.36■■□□□ 1.81
PUF60-201ENST00000313352 KIF3BO15066 747 aa26.35■■□□□ 1.81
PUF60-201ENST00000313352 ITGAEP38570 1179 aa26.31■■□□□ 1.8
PUF60-201ENST00000313352 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
PUF60-201ENST00000313352 NCOA1Q15788 1441 aa26.27■■□□□ 1.8
PUF60-201ENST00000313352 RRBP1Q9P2E9 1410 aaKnown RBP26.27■■□□□ 1.8
PUF60-201ENST00000313352 DUOX2Q9NRD8 1548 aa26.26■■□□□ 1.79
PUF60-201ENST00000313352 CLTCQ00610 1675 aaKnown RBP26.25■■□□□ 1.79
PUF60-201ENST00000313352 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
PUF60-201ENST00000313352 C3P01024 1663 aa26.24■■□□□ 1.79
PUF60-201ENST00000313352 ANKRD30AQ9BXX3 1397 aa26.24■■□□□ 1.79
PUF60-201ENST00000313352 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms