RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ARHGEF40Q8TER5 1519 aa23.57■■□□□ 1.36
PPP1CA-201ENST00000312989 PREX2Q70Z35 1606 aa23.54■■□□□ 1.36
PPP1CA-201ENST00000312989 EFCAB2Q5VUJ9 269 aa23.54■■□□□ 1.36
PPP1CA-201ENST00000312989 YEATS2Q9ULM3 1422 aa23.54■■□□□ 1.36
PPP1CA-201ENST00000312989 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
PPP1CA-201ENST00000312989 CDC42BPBQ9Y5S2 1711 aa23.54■■□□□ 1.36
PPP1CA-201ENST00000312989 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
PPP1CA-201ENST00000312989 MAGI2Q86UL8 1455 aa23.5■■□□□ 1.35
PPP1CA-201ENST00000312989 GPATCH8Q9UKJ3 1502 aaKnown RBP23.5■■□□□ 1.35
PPP1CA-201ENST00000312989 KDM5CP41229 1560 aa23.49■■□□□ 1.35
PPP1CA-201ENST00000312989 ABCC1P33527 1531 aa23.48■■□□□ 1.35
PPP1CA-201ENST00000312989 ZFYVE16Q7Z3T8 1539 aa23.48■■□□□ 1.35
PPP1CA-201ENST00000312989 SIGLEC1Q9BZZ2 1709 aa23.48■■□□□ 1.35
PPP1CA-201ENST00000312989 CDC42BPAQ5VT25 1732 aa23.47■■□□□ 1.35
PPP1CA-201ENST00000312989 VPS8Q8N3P4 1428 aa23.46■■□□□ 1.35
PPP1CA-201ENST00000312989 ADAMTSL3P82987 1691 aa23.45■■□□□ 1.35
PPP1CA-201ENST00000312989 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
PPP1CA-201ENST00000312989 TRAPPC8Q9Y2L5 1435 aa23.44■■□□□ 1.34
PPP1CA-201ENST00000312989 EHBP1L1Q8N3D4 1523 aa23.44■■□□□ 1.34
PPP1CA-201ENST00000312989 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
PPP1CA-201ENST00000312989 MTUS2Q5JR59 1369 aa23.42■■□□□ 1.34
PPP1CA-201ENST00000312989 SAMD9LQ8IVG5 1584 aa23.42■■□□□ 1.34
PPP1CA-201ENST00000312989 BCORL1Q5H9F3 1711 aa23.41■■□□□ 1.34
PPP1CA-201ENST00000312989 TIAM1Q13009 1591 aa23.39■■□□□ 1.33
PPP1CA-201ENST00000312989 ITSN2Q9NZM3 1697 aa23.38■■□□□ 1.33
PPP1CA-201ENST00000312989 MLH3Q9UHC1 1453 aa23.38■■□□□ 1.33
PPP1CA-201ENST00000312989 ATP10AO60312 1499 aa23.36■■□□□ 1.33
PPP1CA-201ENST00000312989 HECW2Q9P2P5 1572 aa23.35■■□□□ 1.33
PPP1CA-201ENST00000312989 MADDQ8WXG6 1647 aa23.35■■□□□ 1.33
PPP1CA-201ENST00000312989 DIP2CQ9Y2E4 1556 aa23.35■■□□□ 1.33
PPP1CA-201ENST00000312989 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
PPP1CA-201ENST00000312989 PTPRMP28827 1452 aa23.34■■□□□ 1.33
PPP1CA-201ENST00000312989 C9orf84Q5VXU9 1444 aa23.34■■□□□ 1.33
PPP1CA-201ENST00000312989 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
PPP1CA-201ENST00000312989 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
PPP1CA-201ENST00000312989 ABCA6Q8N139 1617 aa23.32■■□□□ 1.32
PPP1CA-201ENST00000312989 NCOA2Q15596 1464 aa23.32■■□□□ 1.32
PPP1CA-201ENST00000312989 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
PPP1CA-201ENST00000312989 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
PPP1CA-201ENST00000312989 LRRC9Q6ZRR7 1453 aa23.3■■□□□ 1.32
PPP1CA-201ENST00000312989 ARID4BQ4LE39 1312 aaPredicted RBP23.3■■□□□ 1.32
PPP1CA-201ENST00000312989 CFDP1Q9UEE9 299 aaPredicted RBP23.29■■□□□ 1.32
PPP1CA-201ENST00000312989 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
PPP1CA-201ENST00000312989 ZNF777Q9ULD5 760 aaPredicted RBP23.27■■□□□ 1.32
PPP1CA-201ENST00000312989 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
PPP1CA-201ENST00000312989 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
PPP1CA-201ENST00000312989 PLEKHH2Q8IVE3 1493 aa23.26■■□□□ 1.31
PPP1CA-201ENST00000312989 HNRNPMP52272 730 aaKnown RBP eCLIP23.26■■□□□ 1.31
PPP1CA-201ENST00000312989 KANK4Q5T7N3 995 aaPredicted RBP23.26■■□□□ 1.31
PPP1CA-201ENST00000312989 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
PPP1CA-201ENST00000312989 AGLP35573 1532 aa23.23■■□□□ 1.31
PPP1CA-201ENST00000312989 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
PPP1CA-201ENST00000312989 RIMS1Q86UR5 1692 aaKnown RBP23.21■■□□□ 1.31
PPP1CA-201ENST00000312989 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
PPP1CA-201ENST00000312989 MLECQ14165 292 aa23.17■■□□□ 1.3
PPP1CA-201ENST00000312989 CAMSAP2Q08AD1 1489 aa23.16■■□□□ 1.3
PPP1CA-201ENST00000312989 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
PPP1CA-201ENST00000312989 PLXNC1O60486 1568 aa23.16■■□□□ 1.3
PPP1CA-201ENST00000312989 FER1L4A9Z1Z3 1794 aa23.12■■□□□ 1.29
PPP1CA-201ENST00000312989 LMTK3Q96Q04 1460 aa23.11■■□□□ 1.29
PPP1CA-201ENST00000312989 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
PPP1CA-201ENST00000312989 RTEL1-TNFRSF6BF6WH68 1400 aa23.1■■□□□ 1.29
PPP1CA-201ENST00000312989 CCDC141Q6ZP82 1450 aa23.09■■□□□ 1.29
PPP1CA-201ENST00000312989 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
PPP1CA-201ENST00000312989 A2MP01023 1474 aa23.08■■□□□ 1.29
PPP1CA-201ENST00000312989 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.28
PPP1CA-201ENST00000312989 MIA2Q96PC5 1412 aa23.07■■□□□ 1.28
PPP1CA-201ENST00000312989 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-201ENST00000312989 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
PPP1CA-201ENST00000312989 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
PPP1CA-201ENST00000312989 DHX29Q7Z478 1369 aaKnown RBP22.98■■□□□ 1.27
PPP1CA-201ENST00000312989 MAST1Q9Y2H9 1570 aa22.98■■□□□ 1.27
PPP1CA-201ENST00000312989 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
PPP1CA-201ENST00000312989 CNTLNQ9NXG0 1405 aa22.96■■□□□ 1.27
PPP1CA-201ENST00000312989 C3P01024 1663 aa22.95■■□□□ 1.27
PPP1CA-201ENST00000312989 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
PPP1CA-201ENST00000312989 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
PPP1CA-201ENST00000312989 HSPA2P54652 639 aa22.91■■□□□ 1.26
PPP1CA-201ENST00000312989 APLP2Q06481 763 aa22.91■■□□□ 1.26
PPP1CA-201ENST00000312989 PTPN23Q9H3S7 1636 aa22.91■■□□□ 1.26
PPP1CA-201ENST00000312989 ABCC5O15440 1437 aa22.91■■□□□ 1.26
PPP1CA-201ENST00000312989 MROH2AA6NES4 1674 aa22.9■■□□□ 1.26
PPP1CA-201ENST00000312989 ZMYM3Q14202 1370 aa22.89■■□□□ 1.25
PPP1CA-201ENST00000312989 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
PPP1CA-201ENST00000312989 SHANK2Q9UPX8 1470 aa22.88■■□□□ 1.25
PPP1CA-201ENST00000312989 TSPY4P0CV99 314 aa22.87■■□□□ 1.25
PPP1CA-201ENST00000312989 TSPY10P0CW01 314 aa22.87■■□□□ 1.25
PPP1CA-201ENST00000312989 GGT6Q6P531 493 aa22.86■■□□□ 1.25
PPP1CA-201ENST00000312989 CLTCQ00610 1675 aaKnown RBP22.85■■□□□ 1.25
PPP1CA-201ENST00000312989 NPATQ14207 1427 aa22.85■■□□□ 1.25
PPP1CA-201ENST00000312989 PPP6R1Q9UPN7 881 aa22.85■■□□□ 1.25
PPP1CA-201ENST00000312989 DAPK1P53355 1430 aa22.84■■□□□ 1.25
PPP1CA-201ENST00000312989 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
PPP1CA-201ENST00000312989 DNMT1P26358 1616 aaKnown RBP22.84■■□□□ 1.25
PPP1CA-201ENST00000312989 CROCC2H7BZ55 1655 aa22.83■■□□□ 1.25
PPP1CA-201ENST00000312989 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
PPP1CA-201ENST00000312989 KIF3BO15066 747 aa22.82■■□□□ 1.24
PPP1CA-201ENST00000312989 ESF1Q9H501 851 aaKnown RBP22.82■■□□□ 1.24
PPP1CA-201ENST00000312989 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
PPP1CA-201ENST00000312989 MROH1Q8NDA8 1641 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms