RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ARHGAP5Q13017 1502 aa34.46■■■■□ 3.11
CCDC85B-201ENST00000312579 ZNF777Q9ULD5 760 aaPredicted RBP34.45■■■■□ 3.11
CCDC85B-201ENST00000312579 FGD6Q6ZV73 1430 aa34.43■■■■□ 3.1
CCDC85B-201ENST00000312579 ZNF644Q9H582 1327 aaPredicted RBP34.43■■■■□ 3.1
CCDC85B-201ENST00000312579 PPRC1Q5VV67 1664 aaKnown RBP34.42■■■■□ 3.1
CCDC85B-201ENST00000312579 EFCAB2Q5VUJ9 269 aa34.39■■■■□ 3.1
CCDC85B-201ENST00000312579 FANCAO15360 1455 aa34.39■■■■□ 3.1
CCDC85B-201ENST00000312579 ARAP3Q8WWN8 1544 aa34.38■■■■□ 3.09
CCDC85B-201ENST00000312579 MIA2Q96PC5 1412 aa34.37■■■■□ 3.09
CCDC85B-201ENST00000312579 PTPN23Q9H3S7 1636 aa34.34■■■■□ 3.09
CCDC85B-201ENST00000312579 SAMD9LQ8IVG5 1584 aa34.33■■■■□ 3.09
CCDC85B-201ENST00000312579 FAM50AQ14320 339 aaKnown RBP34.32■■■■□ 3.08
CCDC85B-201ENST00000312579 CAMSAP2Q08AD1 1489 aa34.31■■■■□ 3.08
CCDC85B-201ENST00000312579 RRBP1Q9P2E9 1410 aaKnown RBP34.31■■■■□ 3.08
CCDC85B-201ENST00000312579 AKNAQ7Z591 1439 aa34.29■■■■□ 3.08
CCDC85B-201ENST00000312579 TEX14Q8IWB6 1497 aa34.27■■■■□ 3.08
CCDC85B-201ENST00000312579 TCOF1Q13428 1488 aaKnown RBP34.26■■■■□ 3.08
CCDC85B-201ENST00000312579 HNRNPMP52272 730 aaKnown RBP eCLIP34.25■■■■□ 3.078e-6■■□□□ 11.4
CCDC85B-201ENST00000312579 NEO1Q92859 1461 aa34.25■■■■□ 3.07
CCDC85B-201ENST00000312579 CFAP74Q9C0B2 1584 aa34.24■■■■□ 3.07
CCDC85B-201ENST00000312579 ARHGEF12Q9NZN5 1544 aa34.23■■■■□ 3.07
CCDC85B-201ENST00000312579 ADGRL1O94910 1474 aa34.22■■■■□ 3.07
CCDC85B-201ENST00000312579 ABCC1P33527 1531 aa34.22■■■■□ 3.07
CCDC85B-201ENST00000312579 SYCP2Q9BX26 1530 aa34.22■■■■□ 3.07
CCDC85B-201ENST00000312579 SCAPERQ9BY12 1400 aa34.19■■■■□ 3.06
CCDC85B-201ENST00000312579 PLEKHH2Q8IVE3 1493 aa34.16■■■■□ 3.06
CCDC85B-201ENST00000312579 MBD5Q9P267 1494 aa34.15■■■■□ 3.06
CCDC85B-201ENST00000312579 ITGAEP38570 1179 aa34.15■■■■□ 3.06
CCDC85B-201ENST00000312579 KIAA1107Q9UPP5 1409 aa34.15■■■■□ 3.06
CCDC85B-201ENST00000312579 TRAPPC8Q9Y2L5 1435 aa34.14■■■■□ 3.06
CCDC85B-201ENST00000312579 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.12■■■■□ 3.05
CCDC85B-201ENST00000312579 AFAP1Q8N556 730 aa34.11■■■■□ 3.05
CCDC85B-201ENST00000312579 COL17A1Q9UMD9 1497 aaPredicted RBP34.11■■■■□ 3.05
CCDC85B-201ENST00000312579 RAPGEF3O95398 923 aa34.1■■■■□ 3.05
CCDC85B-201ENST00000312579 TRIM26Q12899 539 aaPredicted RBP34.09■■■■□ 3.05
CCDC85B-201ENST00000312579 ABCC5O15440 1437 aa34.08■■■■□ 3.05
CCDC85B-201ENST00000312579 DENND4BO75064 1496 aaPredicted RBP34.08■■■■□ 3.05
CCDC85B-201ENST00000312579 DAPK1P53355 1430 aa34.06■■■■□ 3.04
CCDC85B-201ENST00000312579 ARHGEF5Q12774 1597 aa34.06■■■■□ 3.04
CCDC85B-201ENST00000312579 DNMT1P26358 1616 aaKnown RBP34.05■■■■□ 3.04
CCDC85B-201ENST00000312579 PTPRKQ15262 1439 aa34.04■■■■□ 3.04
CCDC85B-201ENST00000312579 POGZQ7Z3K3 1410 aa34.04■■■■□ 3.04
CCDC85B-201ENST00000312579 CCDC141Q6ZP82 1450 aa34.04■■■■□ 3.04
CCDC85B-201ENST00000312579 CHIC2Q9UKJ5 165 aa34.01■■■■□ 3.04
CCDC85B-201ENST00000312579 FRMPD1Q5SYB0 1578 aa34■■■■□ 3.03
CCDC85B-201ENST00000312579 RSPH4AQ5TD94 716 aa33.99■■■■□ 3.03
CCDC85B-201ENST00000312579 RICTORQ6R327 1708 aa33.99■■■■□ 3.03
CCDC85B-201ENST00000312579 ZNF518AQ6AHZ1 1483 aa33.98■■■■□ 3.03
CCDC85B-201ENST00000312579 CROCC2H7BZ55 1655 aa33.96■■■■□ 3.03
CCDC85B-201ENST00000312579 KDM6BO15054 1643 aa33.95■■■■□ 3.03
CCDC85B-201ENST00000312579 TSPY4P0CV99 314 aa33.95■■■■□ 3.03
CCDC85B-201ENST00000312579 TSPY10P0CW01 314 aa33.95■■■■□ 3.03
CCDC85B-201ENST00000312579 SPAG9O60271 1321 aaKnown RBP33.93■■■■□ 3.02
CCDC85B-201ENST00000312579 C9orf84Q5VXU9 1444 aa33.93■■■■□ 3.02
CCDC85B-201ENST00000312579 KDM5CP41229 1560 aa33.92■■■■□ 3.02
CCDC85B-201ENST00000312579 MYT1LQ9UL68 1186 aa33.91■■■■□ 3.02
CCDC85B-201ENST00000312579 PCGF6Q9BYE7 350 aa33.9■■■■□ 3.02
CCDC85B-201ENST00000312579 SHANK2Q9UPX8 1470 aa33.89■■■■□ 3.02
CCDC85B-201ENST00000312579 ZFYVE16Q7Z3T8 1539 aa33.85■■■■□ 3.01
CCDC85B-201ENST00000312579 MAST1Q9Y2H9 1570 aa33.85■■■■□ 3.01
CCDC85B-201ENST00000312579 RRP7BPQ9NSQ0 103 aa33.84■■■■□ 3.01
CCDC85B-201ENST00000312579 INO80Q9ULG1 1556 aaPredicted RBP33.84■■■■□ 3.01
CCDC85B-201ENST00000312579 HECW2Q9P2P5 1572 aa33.83■■■■□ 3.01
CCDC85B-201ENST00000312579 ATP7AQ04656 1500 aa33.83■■■■□ 3.01
CCDC85B-201ENST00000312579 ZMYM4Q5VZL5 1548 aa33.83■■■■□ 3.01
CCDC85B-201ENST00000312579 KIDINS220Q9ULH0 1771 aa33.82■■■■□ 3.01
CCDC85B-201ENST00000312579 MLH3Q9UHC1 1453 aa33.82■■■■□ 3
CCDC85B-201ENST00000312579 RTEL1-TNFRSF6BF6WH68 1400 aa33.8■■■■□ 3
CCDC85B-201ENST00000312579 YEATS2Q9ULM3 1422 aa33.8■■■■□ 3
CCDC85B-201ENST00000312579 ADGBQ8N7X0 1667 aa33.79■■■■□ 3
CCDC85B-201ENST00000312579 ADGRL2O95490 1459 aa33.79■■■■□ 3
CCDC85B-201ENST00000312579 NCOA1Q15788 1441 aa33.78■■■■□ 3
CCDC85B-201ENST00000312579 ANKRD30AQ9BXX3 1397 aa33.77■■■■□ 3
CCDC85B-201ENST00000312579 ROCK1Q13464 1354 aa33.75■■■□□ 2.99
CCDC85B-201ENST00000312579 ABCA6Q8N139 1617 aa33.74■■■□□ 2.99
CCDC85B-201ENST00000312579 KIF15Q9NS87 1388 aa33.73■■■□□ 2.99
CCDC85B-201ENST00000312579 MAGI2Q86UL8 1455 aa33.72■■■□□ 2.99
CCDC85B-201ENST00000312579 PLXNC1O60486 1568 aa33.71■■■□□ 2.99
CCDC85B-201ENST00000312579 DIP2CQ9Y2E4 1556 aa33.7■■■□□ 2.99
CCDC85B-201ENST00000312579 NAIPQ13075 1403 aa33.67■■■□□ 2.98
CCDC85B-201ENST00000312579 HFM1A2PYH4 1435 aa33.66■■■□□ 2.98
CCDC85B-201ENST00000312579 ARHGEF40Q8TER5 1519 aa33.65■■■□□ 2.98
CCDC85B-201ENST00000312579 ATP10AO60312 1499 aa33.61■■■□□ 2.97
CCDC85B-201ENST00000312579 A2MP01023 1474 aa33.61■■■□□ 2.97
CCDC85B-201ENST00000312579 DUOX2Q9NRD8 1548 aa33.61■■■□□ 2.97
CCDC85B-201ENST00000312579 GCC2Q8IWJ2 1684 aa33.6■■■□□ 2.97
CCDC85B-201ENST00000312579 DHX29Q7Z478 1369 aaKnown RBP33.59■■■□□ 2.97
CCDC85B-201ENST00000312579 SETD5Q9C0A6 1442 aa33.58■■■□□ 2.97
CCDC85B-201ENST00000312579 ANKRD50Q9ULJ7 1429 aa33.58■■■□□ 2.97
CCDC85B-201ENST00000312579 SIGLEC1Q9BZZ2 1709 aa33.54■■■□□ 2.96
CCDC85B-201ENST00000312579 RAB3GAP2Q9H2M9 1393 aa33.52■■■□□ 2.96
CCDC85B-201ENST00000312579 ERBINQ96RT1 1412 aa33.51■■■□□ 2.95
CCDC85B-201ENST00000312579 KIF3BO15066 747 aa33.48■■■□□ 2.95
CCDC85B-201ENST00000312579 REREQ9P2R6 1566 aa33.47■■■□□ 2.95
CCDC85B-201ENST00000312579 ARID4BQ4LE39 1312 aaPredicted RBP33.43■■■□□ 2.94
CCDC85B-201ENST00000312579 EIF2AK4Q9P2K8 1649 aaKnown RBP33.4■■■□□ 2.94
CCDC85B-201ENST00000312579 MLECQ14165 292 aa33.39■■■□□ 2.94
CCDC85B-201ENST00000312579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.39■■■□□ 2.94
CCDC85B-201ENST00000312579 AGLP35573 1532 aa33.39■■■□□ 2.94
CCDC85B-201ENST00000312579 GGT6Q6P531 493 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms