RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
VANGL1-201ENST00000310260 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
VANGL1-201ENST00000310260 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
VANGL1-201ENST00000310260 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
VANGL1-201ENST00000310260 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
VANGL1-201ENST00000310260 ABCA9Q8IUA7 1624 aa18.86■□□□□ 0.61
VANGL1-201ENST00000310260 GLI2P10070 1586 aa18.86■□□□□ 0.61
VANGL1-201ENST00000310260 GPATCH8Q9UKJ3 1502 aaKnown RBP18.86■□□□□ 0.61
VANGL1-201ENST00000310260 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
VANGL1-201ENST00000310260 ARHGAP5Q13017 1502 aa18.85■□□□□ 0.61
VANGL1-201ENST00000310260 PLCH2O75038 1416 aa18.84■□□□□ 0.61
VANGL1-201ENST00000310260 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
VANGL1-201ENST00000310260 FANCAO15360 1455 aa18.81■□□□□ 0.6
VANGL1-201ENST00000310260 MYOM3Q5VTT5 1437 aa18.81■□□□□ 0.6
VANGL1-201ENST00000310260 HNRNPMP52272 730 aaKnown RBP eCLIP18.81■□□□□ 0.6
VANGL1-201ENST00000310260 ITGAEP38570 1179 aa18.8■□□□□ 0.6
VANGL1-201ENST00000310260 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
VANGL1-201ENST00000310260 CDC42BPAQ5VT25 1732 aa18.79■□□□□ 0.6
VANGL1-201ENST00000310260 RAPGEF3O95398 923 aa18.76■□□□□ 0.59
VANGL1-201ENST00000310260 CDC42BPBQ9Y5S2 1711 aa18.76■□□□□ 0.59
VANGL1-201ENST00000310260 AKNAQ7Z591 1439 aa18.76■□□□□ 0.59
VANGL1-201ENST00000310260 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
VANGL1-201ENST00000310260 TEX14Q8IWB6 1497 aa18.76■□□□□ 0.59
VANGL1-201ENST00000310260 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
VANGL1-201ENST00000310260 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
VANGL1-201ENST00000310260 AFAP1Q8N556 730 aa18.74■□□□□ 0.59
VANGL1-201ENST00000310260 SCAPERQ9BY12 1400 aa18.73■□□□□ 0.59
VANGL1-201ENST00000310260 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
VANGL1-201ENST00000310260 ITSN2Q9NZM3 1697 aa18.72■□□□□ 0.59
VANGL1-201ENST00000310260 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
VANGL1-201ENST00000310260 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
VANGL1-201ENST00000310260 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
VANGL1-201ENST00000310260 NEO1Q92859 1461 aa18.69■□□□□ 0.58
VANGL1-201ENST00000310260 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
VANGL1-201ENST00000310260 SAMD9LQ8IVG5 1584 aa18.68■□□□□ 0.58
VANGL1-201ENST00000310260 ARAP3Q8WWN8 1544 aa18.68■□□□□ 0.58
VANGL1-201ENST00000310260 PTPN23Q9H3S7 1636 aa18.68■□□□□ 0.58
VANGL1-201ENST00000310260 COL17A1Q9UMD9 1497 aaPredicted RBP18.67■□□□□ 0.58
VANGL1-201ENST00000310260 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
VANGL1-201ENST00000310260 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
VANGL1-201ENST00000310260 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
VANGL1-201ENST00000310260 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
VANGL1-201ENST00000310260 TSPY4P0CV99 314 aa18.65■□□□□ 0.58
VANGL1-201ENST00000310260 TSPY10P0CW01 314 aa18.65■□□□□ 0.58
VANGL1-201ENST00000310260 CFAP74Q9C0B2 1584 aa18.64■□□□□ 0.57
VANGL1-201ENST00000310260 PLEKHH2Q8IVE3 1493 aa18.63■□□□□ 0.57
VANGL1-201ENST00000310260 ABCC1P33527 1531 aa18.62■□□□□ 0.57
VANGL1-201ENST00000310260 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
VANGL1-201ENST00000310260 SPAG9O60271 1321 aaKnown RBP18.62■□□□□ 0.57
VANGL1-201ENST00000310260 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
VANGL1-201ENST00000310260 MBD5Q9P267 1494 aa18.6■□□□□ 0.57
VANGL1-201ENST00000310260 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
VANGL1-201ENST00000310260 KDM6BO15054 1643 aa18.59■□□□□ 0.57
VANGL1-201ENST00000310260 RSPH4AQ5TD94 716 aa18.59■□□□□ 0.57
VANGL1-201ENST00000310260 POGZQ7Z3K3 1410 aa18.59■□□□□ 0.57
VANGL1-201ENST00000310260 ABCC5O15440 1437 aa18.57■□□□□ 0.56
VANGL1-201ENST00000310260 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
VANGL1-201ENST00000310260 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
VANGL1-201ENST00000310260 ZNF518AQ6AHZ1 1483 aa18.57■□□□□ 0.56
VANGL1-201ENST00000310260 DAPK1P53355 1430 aa18.56■□□□□ 0.56
VANGL1-201ENST00000310260 CCDC141Q6ZP82 1450 aa18.56■□□□□ 0.56
VANGL1-201ENST00000310260 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
VANGL1-201ENST00000310260 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
VANGL1-201ENST00000310260 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
VANGL1-201ENST00000310260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.55
VANGL1-201ENST00000310260 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
VANGL1-201ENST00000310260 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
VANGL1-201ENST00000310260 YEATS2Q9ULM3 1422 aa18.5■□□□□ 0.55
VANGL1-201ENST00000310260 ARHGEF5Q12774 1597 aa18.5■□□□□ 0.55
VANGL1-201ENST00000310260 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
VANGL1-201ENST00000310260 ARID4BQ4LE39 1312 aaPredicted RBP18.48■□□□□ 0.55
VANGL1-201ENST00000310260 ANKRD30AQ9BXX3 1397 aa18.46■□□□□ 0.55
VANGL1-201ENST00000310260 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
VANGL1-201ENST00000310260 KDM5CP41229 1560 aa18.45■□□□□ 0.54
VANGL1-201ENST00000310260 MIER1Q8N108 512 aa18.44■□□□□ 0.54
VANGL1-201ENST00000310260 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
VANGL1-201ENST00000310260 KIF15Q9NS87 1388 aa18.44■□□□□ 0.54
VANGL1-201ENST00000310260 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
VANGL1-201ENST00000310260 MLECQ14165 292 aa18.43■□□□□ 0.54
VANGL1-201ENST00000310260 ZFYVE16Q7Z3T8 1539 aa18.43■□□□□ 0.54
VANGL1-201ENST00000310260 NCOA1Q15788 1441 aa18.43■□□□□ 0.54
VANGL1-201ENST00000310260 RTEL1-TNFRSF6BF6WH68 1400 aa18.42■□□□□ 0.54
VANGL1-201ENST00000310260 KIDINS220Q9ULH0 1771 aa18.42■□□□□ 0.54
VANGL1-201ENST00000310260 SHANK2Q9UPX8 1470 aa18.41■□□□□ 0.54
VANGL1-201ENST00000310260 ZMYM4Q5VZL5 1548 aa18.41■□□□□ 0.54
VANGL1-201ENST00000310260 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
VANGL1-201ENST00000310260 CROCC2H7BZ55 1655 aa18.4■□□□□ 0.54
VANGL1-201ENST00000310260 KIF3BO15066 747 aa18.4■□□□□ 0.54
VANGL1-201ENST00000310260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.54
VANGL1-201ENST00000310260 ATP10AO60312 1499 aa18.39■□□□□ 0.53
VANGL1-201ENST00000310260 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
VANGL1-201ENST00000310260 GGT6Q6P531 493 aa18.38■□□□□ 0.53
VANGL1-201ENST00000310260 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
VANGL1-201ENST00000310260 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
VANGL1-201ENST00000310260 A2MP01023 1474 aa18.37■□□□□ 0.53
VANGL1-201ENST00000310260 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
VANGL1-201ENST00000310260 MAST1Q9Y2H9 1570 aa18.36■□□□□ 0.53
VANGL1-201ENST00000310260 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
VANGL1-201ENST00000310260 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
VANGL1-201ENST00000310260 ARHGEF40Q8TER5 1519 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms