RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CCER1Q8TC90 406 aaPredicted RBP33.64■■■□□ 2.98
IRF3-201ENST00000309877 HRCP23327 699 aa33.61■■■□□ 2.97
IRF3-201ENST00000309877 SETD5Q9C0A6 1442 aa33.6■■■□□ 2.97
IRF3-201ENST00000309877 MYO5CQ9NQX4 1742 aa33.6■■■□□ 2.97
IRF3-201ENST00000309877 DAPK1P53355 1430 aa33.6■■■□□ 2.97
IRF3-201ENST00000309877 ARHGAP5Q13017 1502 aa33.6■■■□□ 2.97
IRF3-201ENST00000309877 CDC42BPBQ9Y5S2 1711 aa33.59■■■□□ 2.97
IRF3-201ENST00000309877 DNMT1P26358 1616 aaKnown RBP33.58■■■□□ 2.97
IRF3-201ENST00000309877 PLCH2O75038 1416 aa33.58■■■□□ 2.97
IRF3-201ENST00000309877 ABCC5O15440 1437 aa33.57■■■□□ 2.96
IRF3-201ENST00000309877 CHIC2Q9UKJ5 165 aa33.57■■■□□ 2.96
IRF3-201ENST00000309877 RAB3GAP2Q9H2M9 1393 aa33.54■■■□□ 2.96
IRF3-201ENST00000309877 EFCAB2Q5VUJ9 269 aa33.52■■■□□ 2.96
IRF3-201ENST00000309877 ABCA9Q8IUA7 1624 aa33.51■■■□□ 2.96
IRF3-201ENST00000309877 HFM1A2PYH4 1435 aa33.5■■■□□ 2.95
IRF3-201ENST00000309877 SAMD9LQ8IVG5 1584 aa33.5■■■□□ 2.95
IRF3-201ENST00000309877 MAPKBP1O60336 1514 aa33.49■■■□□ 2.95
IRF3-201ENST00000309877 HNRNPMP52272 730 aaKnown RBP eCLIP33.47■■■□□ 2.95
IRF3-201ENST00000309877 ARAP3Q8WWN8 1544 aa33.46■■■□□ 2.95
IRF3-201ENST00000309877 RRP7BPQ9NSQ0 103 aa33.46■■■□□ 2.95
IRF3-201ENST00000309877 PLEKHH2Q8IVE3 1493 aa33.46■■■□□ 2.95
IRF3-201ENST00000309877 AKNAQ7Z591 1439 aa33.45■■■□□ 2.94
IRF3-201ENST00000309877 ZEB1P37275 1124 aaPredicted RBP33.45■■■□□ 2.94
IRF3-201ENST00000309877 ROCK1Q13464 1354 aa33.44■■■□□ 2.94
IRF3-201ENST00000309877 NAIPQ13075 1403 aa33.44■■■□□ 2.94
IRF3-201ENST00000309877 RSPH4AQ5TD94 716 aa33.44■■■□□ 2.94
IRF3-201ENST00000309877 ARHGEF5Q12774 1597 aa33.42■■■□□ 2.94
IRF3-201ENST00000309877 MBD5Q9P267 1494 aa33.41■■■□□ 2.94
IRF3-201ENST00000309877 TSPY4P0CV99 314 aa33.41■■■□□ 2.94
IRF3-201ENST00000309877 TSPY10P0CW01 314 aa33.41■■■□□ 2.94
IRF3-201ENST00000309877 KIAA1107Q9UPP5 1409 aa33.41■■■□□ 2.94
IRF3-201ENST00000309877 CROCC2H7BZ55 1655 aa33.38■■■□□ 2.93
IRF3-201ENST00000309877 SYCP2Q9BX26 1530 aa33.38■■■□□ 2.93
IRF3-201ENST00000309877 CCDC141Q6ZP82 1450 aa33.37■■■□□ 2.93
IRF3-201ENST00000309877 SHANK2Q9UPX8 1470 aa33.37■■■□□ 2.93
IRF3-201ENST00000309877 CD109Q6YHK3 1445 aa33.36■■■□□ 2.93
IRF3-201ENST00000309877 FANCAO15360 1455 aa33.35■■■□□ 2.93
IRF3-201ENST00000309877 DHX57Q6P158 1386 aaKnown RBP33.34■■■□□ 2.93
IRF3-201ENST00000309877 C9orf84Q5VXU9 1444 aa33.33■■■□□ 2.93
IRF3-201ENST00000309877 ANKRD30AQ9BXX3 1397 aa33.33■■■□□ 2.93
IRF3-201ENST00000309877 GCC2Q8IWJ2 1684 aa33.33■■■□□ 2.93
IRF3-201ENST00000309877 ADGRL2O95490 1459 aa33.32■■■□□ 2.92
IRF3-201ENST00000309877 ADGBQ8N7X0 1667 aa33.31■■■□□ 2.92
IRF3-201ENST00000309877 NCOA1Q15788 1441 aa33.3■■■□□ 2.92
IRF3-201ENST00000309877 ABCC1P33527 1531 aa33.3■■■□□ 2.92
IRF3-201ENST00000309877 ARHGEF12Q9NZN5 1544 aa33.28■■■□□ 2.92
IRF3-201ENST00000309877 GLI2P10070 1586 aa33.23■■■□□ 2.91
IRF3-201ENST00000309877 FAM69CQ0P6D2 419 aa33.21■■■□□ 2.91
IRF3-201ENST00000309877 ADGRL1O94910 1474 aa33.21■■■□□ 2.91
IRF3-201ENST00000309877 CLSPNQ9HAW4 1339 aa33.2■■■□□ 2.91
IRF3-201ENST00000309877 TRAPPC8Q9Y2L5 1435 aa33.2■■■□□ 2.9
IRF3-201ENST00000309877 CFAP74Q9C0B2 1584 aa33.19■■■□□ 2.9
IRF3-201ENST00000309877 MAST1Q9Y2H9 1570 aa33.19■■■□□ 2.9
IRF3-201ENST00000309877 ACIN1Q9UKV3 1341 aaKnown RBP33.19■■■□□ 2.9
IRF3-201ENST00000309877 SCAPERQ9BY12 1400 aa33.17■■■□□ 2.9
IRF3-201ENST00000309877 KDM6BO15054 1643 aa33.17■■■□□ 2.9
IRF3-201ENST00000309877 DIP2BQ9P265 1576 aa33.16■■■□□ 2.9
IRF3-201ENST00000309877 MAP3K4Q9Y6R4 1608 aa33.15■■■□□ 2.9
IRF3-201ENST00000309877 TRIM52Q96A61 297 aa33.15■■■□□ 2.9
IRF3-201ENST00000309877 KIF15Q9NS87 1388 aa33.15■■■□□ 2.9
IRF3-201ENST00000309877 AFAP1Q8N556 730 aa33.13■■■□□ 2.89
IRF3-201ENST00000309877 ANKRD50Q9ULJ7 1429 aa33.11■■■□□ 2.89
IRF3-201ENST00000309877 SPAG9O60271 1321 aaKnown RBP33.11■■■□□ 2.89
IRF3-201ENST00000309877 NEO1Q92859 1461 aa33.1■■■□□ 2.89
IRF3-201ENST00000309877 RTEL1-TNFRSF6BF6WH68 1400 aa33.05■■■□□ 2.88
IRF3-201ENST00000309877 PLXNC1O60486 1568 aa33.05■■■□□ 2.88
IRF3-201ENST00000309877 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
IRF3-201ENST00000309877 MYT1LQ9UL68 1186 aa33.01■■■□□ 2.87
IRF3-201ENST00000309877 ZNF518AQ6AHZ1 1483 aa33■■■□□ 2.87
IRF3-201ENST00000309877 ZFYVE16Q7Z3T8 1539 aa32.98■■■□□ 2.87
IRF3-201ENST00000309877 POGZQ7Z3K3 1410 aa32.97■■■□□ 2.87
IRF3-201ENST00000309877 DUOX2Q9NRD8 1548 aa32.97■■■□□ 2.87
IRF3-201ENST00000309877 MPHOSPH9Q99550 1183 aa32.96■■■□□ 2.87
IRF3-201ENST00000309877 ATP7AQ04656 1500 aa32.95■■■□□ 2.86
IRF3-201ENST00000309877 DENND4BO75064 1496 aaPredicted RBP32.95■■■□□ 2.86
IRF3-201ENST00000309877 TEX14Q8IWB6 1497 aa32.94■■■□□ 2.86
IRF3-201ENST00000309877 INO80Q9ULG1 1556 aaPredicted RBP32.93■■■□□ 2.86
IRF3-201ENST00000309877 SLC4A1APQ9BWU0 796 aaKnown RBP32.9■■■□□ 2.86
IRF3-201ENST00000309877 KIF13AQ9H1H9 1805 aa32.9■■■□□ 2.86
IRF3-201ENST00000309877 ERBINQ96RT1 1412 aa32.9■■■□□ 2.86
IRF3-201ENST00000309877 TSPOAP1O95153 1857 aa32.89■■■□□ 2.86
IRF3-201ENST00000309877 RAPGEF3O95398 923 aa32.88■■■□□ 2.85
IRF3-201ENST00000309877 KDM5CP41229 1560 aa32.87■■■□□ 2.85
IRF3-201ENST00000309877 NUP155O75694 1391 aa32.86■■■□□ 2.85
IRF3-201ENST00000309877 PPRC1Q5VV67 1664 aaKnown RBP32.86■■■□□ 2.85
IRF3-201ENST00000309877 PZPP20742 1482 aa32.83■■■□□ 2.85
IRF3-201ENST00000309877 MLH3Q9UHC1 1453 aa32.83■■■□□ 2.85
IRF3-201ENST00000309877 SIN3AQ96ST3 1273 aa32.82■■■□□ 2.84
IRF3-201ENST00000309877 KIDINS220Q9ULH0 1771 aa32.81■■■□□ 2.84
IRF3-201ENST00000309877 NEUROD1Q13562 356 aa32.8■■■□□ 2.84
IRF3-201ENST00000309877 HECW2Q9P2P5 1572 aa32.79■■■□□ 2.84
IRF3-201ENST00000309877 KDM5DQ9BY66 1539 aa32.79■■■□□ 2.84
IRF3-201ENST00000309877 DHX29Q7Z478 1369 aaKnown RBP32.78■■■□□ 2.84
IRF3-201ENST00000309877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.76■■■□□ 2.845e-6■■■□□ 18.6
IRF3-201ENST00000309877 RICTORQ6R327 1708 aa32.76■■■□□ 2.83
IRF3-201ENST00000309877 FOXD1Q16676 465 aa32.75■■■□□ 2.83
IRF3-201ENST00000309877 UNC13BO14795 1591 aa32.75■■■□□ 2.83
IRF3-201ENST00000309877 PKD2Q13563 968 aa32.72■■■□□ 2.83
IRF3-201ENST00000309877 A2MP01023 1474 aa32.7■■■□□ 2.83
IRF3-201ENST00000309877 FAM135AQ9P2D6 1515 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms