RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 PTPRKQ15262 1439 aa21.06■□□□□ 0.96
EIF3F-201ENST00000309828 AKNAQ7Z591 1439 aa21.06■□□□□ 0.96
EIF3F-201ENST00000309828 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
EIF3F-201ENST00000309828 DAPK1P53355 1430 aa21.05■□□□□ 0.96
EIF3F-201ENST00000309828 ASXL2Q76L83 1435 aa21.05■□□□□ 0.96
EIF3F-201ENST00000309828 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
EIF3F-201ENST00000309828 CDC42BPBQ9Y5S2 1711 aa21.04■□□□□ 0.96
EIF3F-201ENST00000309828 ARAP3Q8WWN8 1544 aa21.04■□□□□ 0.96
EIF3F-201ENST00000309828 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
EIF3F-201ENST00000309828 KCNH8Q96L42 1107 aa21.03■□□□□ 0.96
EIF3F-201ENST00000309828 PLCH2O75038 1416 aa21.03■□□□□ 0.96
EIF3F-201ENST00000309828 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
EIF3F-201ENST00000309828 ABCC5O15440 1437 aa21.02■□□□□ 0.96
EIF3F-201ENST00000309828 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.95
EIF3F-201ENST00000309828 ROCK1Q13464 1354 aa21.01■□□□□ 0.95
EIF3F-201ENST00000309828 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
EIF3F-201ENST00000309828 ABCA9Q8IUA7 1624 aa21■□□□□ 0.95
EIF3F-201ENST00000309828 ARHGAP5Q13017 1502 aa21■□□□□ 0.95
EIF3F-201ENST00000309828 ARHGEF5Q12774 1597 aa21■□□□□ 0.95
EIF3F-201ENST00000309828 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
EIF3F-201ENST00000309828 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
EIF3F-201ENST00000309828 SAMD9LQ8IVG5 1584 aa20.98■□□□□ 0.95
EIF3F-201ENST00000309828 MAPKBP1O60336 1514 aa20.98■□□□□ 0.95
EIF3F-201ENST00000309828 CROCC2H7BZ55 1655 aa20.97■□□□□ 0.95
EIF3F-201ENST00000309828 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
EIF3F-201ENST00000309828 RSPH4AQ5TD94 716 aa20.97■□□□□ 0.95
EIF3F-201ENST00000309828 NAIPQ13075 1403 aa20.96■□□□□ 0.95
EIF3F-201ENST00000309828 GCC2Q8IWJ2 1684 aa20.96■□□□□ 0.95
EIF3F-201ENST00000309828 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.95
EIF3F-201ENST00000309828 ACIN1Q9UKV3 1341 aaKnown RBP20.95■□□□□ 0.94
EIF3F-201ENST00000309828 ADGRL2O95490 1459 aa20.94■□□□□ 0.94
EIF3F-201ENST00000309828 ADGBQ8N7X0 1667 aa20.94■□□□□ 0.94
EIF3F-201ENST00000309828 EFCAB2Q5VUJ9 269 aa20.94■□□□□ 0.94
EIF3F-201ENST00000309828 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
EIF3F-201ENST00000309828 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
EIF3F-201ENST00000309828 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
EIF3F-201ENST00000309828 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
EIF3F-201ENST00000309828 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
EIF3F-201ENST00000309828 ABCC1P33527 1531 aa20.88■□□□□ 0.93
EIF3F-201ENST00000309828 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
EIF3F-201ENST00000309828 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
EIF3F-201ENST00000309828 ANKRD30AQ9BXX3 1397 aa20.87■□□□□ 0.93
EIF3F-201ENST00000309828 TSPY4P0CV99 314 aa20.87■□□□□ 0.93
EIF3F-201ENST00000309828 TSPY10P0CW01 314 aa20.87■□□□□ 0.93
EIF3F-201ENST00000309828 MAST1Q9Y2H9 1570 aa20.87■□□□□ 0.93
EIF3F-201ENST00000309828 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
EIF3F-201ENST00000309828 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
EIF3F-201ENST00000309828 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
EIF3F-201ENST00000309828 FANCAO15360 1455 aa20.84■□□□□ 0.93
EIF3F-201ENST00000309828 GLI2P10070 1586 aa20.84■□□□□ 0.93
EIF3F-201ENST00000309828 CFAP74Q9C0B2 1584 aa20.84■□□□□ 0.93
EIF3F-201ENST00000309828 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
EIF3F-201ENST00000309828 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
EIF3F-201ENST00000309828 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
EIF3F-201ENST00000309828 KDM6BO15054 1643 aa20.76■□□□□ 0.91
EIF3F-201ENST00000309828 ADGRL1O94910 1474 aa20.75■□□□□ 0.91
EIF3F-201ENST00000309828 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
EIF3F-201ENST00000309828 NEO1Q92859 1461 aa20.75■□□□□ 0.91
EIF3F-201ENST00000309828 RTEL1-TNFRSF6BF6WH68 1400 aa20.74■□□□□ 0.91
EIF3F-201ENST00000309828 KIF15Q9NS87 1388 aa20.73■□□□□ 0.91
EIF3F-201ENST00000309828 DIP2BQ9P265 1576 aa20.73■□□□□ 0.91
EIF3F-201ENST00000309828 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
EIF3F-201ENST00000309828 TRAPPC8Q9Y2L5 1435 aa20.73■□□□□ 0.91
EIF3F-201ENST00000309828 SCAPERQ9BY12 1400 aa20.71■□□□□ 0.91
EIF3F-201ENST00000309828 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
EIF3F-201ENST00000309828 DUOX2Q9NRD8 1548 aa20.68■□□□□ 0.9
EIF3F-201ENST00000309828 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
EIF3F-201ENST00000309828 ZFYVE16Q7Z3T8 1539 aa20.67■□□□□ 0.9
EIF3F-201ENST00000309828 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
EIF3F-201ENST00000309828 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
EIF3F-201ENST00000309828 FAM69CQ0P6D2 419 aa20.64■□□□□ 0.89
EIF3F-201ENST00000309828 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
EIF3F-201ENST00000309828 KDM5DQ9BY66 1539 aa20.63■□□□□ 0.89
EIF3F-201ENST00000309828 POGZQ7Z3K3 1410 aa20.63■□□□□ 0.89
EIF3F-201ENST00000309828 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
EIF3F-201ENST00000309828 AFAP1Q8N556 730 aa20.63■□□□□ 0.89
EIF3F-201ENST00000309828 KDM5CP41229 1560 aa20.62■□□□□ 0.89
EIF3F-201ENST00000309828 MPHOSPH9Q99550 1183 aa20.61■□□□□ 0.89
EIF3F-201ENST00000309828 TEX14Q8IWB6 1497 aa20.61■□□□□ 0.89
EIF3F-201ENST00000309828 DENND4BO75064 1496 aaPredicted RBP20.59■□□□□ 0.89
EIF3F-201ENST00000309828 PZPP20742 1482 aa20.58■□□□□ 0.89
EIF3F-201ENST00000309828 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
EIF3F-201ENST00000309828 TIMELESSQ9UNS1 1208 aa20.58■□□□□ 0.89
EIF3F-201ENST00000309828 UNC13BO14795 1591 aa20.58■□□□□ 0.88
EIF3F-201ENST00000309828 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
EIF3F-201ENST00000309828 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
EIF3F-201ENST00000309828 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
EIF3F-201ENST00000309828 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
EIF3F-201ENST00000309828 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
EIF3F-201ENST00000309828 KIDINS220Q9ULH0 1771 aa20.54■□□□□ 0.88
EIF3F-201ENST00000309828 NUP155O75694 1391 aa20.54■□□□□ 0.88
EIF3F-201ENST00000309828 MAGI2Q86UL8 1455 aa20.53■□□□□ 0.88
EIF3F-201ENST00000309828 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
EIF3F-201ENST00000309828 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
EIF3F-201ENST00000309828 RICTORQ6R327 1708 aa20.51■□□□□ 0.87
EIF3F-201ENST00000309828 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
EIF3F-201ENST00000309828 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
EIF3F-201ENST00000309828 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
EIF3F-201ENST00000309828 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
EIF3F-201ENST00000309828 SIN3AQ96ST3 1273 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms