RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
TMOD3-201ENST00000308580 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
TMOD3-201ENST00000308580 STK26Q9P289 416 aa12.8□□□□□ -0.36
TMOD3-201ENST00000308580 NOP58Q9Y2X3 529 aaKnown RBP12.8□□□□□ -0.36
TMOD3-201ENST00000308580 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
TMOD3-201ENST00000308580 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
TMOD3-201ENST00000308580 SOX12O15370 315 aa12.79□□□□□ -0.36
TMOD3-201ENST00000308580 MS4A1P11836 297 aa12.78□□□□□ -0.36
TMOD3-201ENST00000308580 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
TMOD3-201ENST00000308580 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
TMOD3-201ENST00000308580 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
TMOD3-201ENST00000308580 RALBP1Q15311 655 aa12.77□□□□□ -0.37
TMOD3-201ENST00000308580 KIF3BO15066 747 aa12.76□□□□□ -0.37
TMOD3-201ENST00000308580 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
TMOD3-201ENST00000308580 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
TMOD3-201ENST00000308580 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
TMOD3-201ENST00000308580 RCAN3Q9UKA8 241 aa12.75□□□□□ -0.37
TMOD3-201ENST00000308580 CCDC18Q5T9S5 1454 aa12.74□□□□□ -0.37
TMOD3-201ENST00000308580 TRIM44Q96DX7 344 aaPredicted RBP12.73□□□□□ -0.37
TMOD3-201ENST00000308580 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
TMOD3-201ENST00000308580 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
TMOD3-201ENST00000308580 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMOD3-201ENST00000308580 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
TMOD3-201ENST00000308580 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
TMOD3-201ENST00000308580 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
TMOD3-201ENST00000308580 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.38
TMOD3-201ENST00000308580 SPAG9O60271 1321 aaKnown RBP12.71□□□□□ -0.38
TMOD3-201ENST00000308580 HDGFL2Q7Z4V5 671 aaPredicted RBP12.7□□□□□ -0.38
TMOD3-201ENST00000308580 IGF1RP08069 1367 aa12.7□□□□□ -0.38
TMOD3-201ENST00000308580 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
TMOD3-201ENST00000308580 ST20-MTHFSA0A0A6YYL1 179 aa12.69□□□□□ -0.38
TMOD3-201ENST00000308580 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
TMOD3-201ENST00000308580 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
TMOD3-201ENST00000308580 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
TMOD3-201ENST00000308580 NUTM2DQ5VT03 806 aaPredicted RBP12.67□□□□□ -0.38
TMOD3-201ENST00000308580 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
TMOD3-201ENST00000308580 EIF3AQ14152 1382 aaKnown RBP12.64□□□□□ -0.39
TMOD3-201ENST00000308580 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
TMOD3-201ENST00000308580 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
TMOD3-201ENST00000308580 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
TMOD3-201ENST00000308580 IPO8O15397 1037 aaKnown RBP12.64□□□□□ -0.39
TMOD3-201ENST00000308580 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
TMOD3-201ENST00000308580 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
TMOD3-201ENST00000308580 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
TMOD3-201ENST00000308580 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
TMOD3-201ENST00000308580 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
TMOD3-201ENST00000308580 SPRYD3Q8NCJ5 442 aa12.63□□□□□ -0.39
TMOD3-201ENST00000308580 APBB1O00213 710 aa12.62□□□□□ -0.39
TMOD3-201ENST00000308580 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
TMOD3-201ENST00000308580 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
TMOD3-201ENST00000308580 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
TMOD3-201ENST00000308580 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
TMOD3-201ENST00000308580 KCNJ4P48050 445 aa12.62□□□□□ -0.39
TMOD3-201ENST00000308580 CCDC144AA2RUR9 1427 aa12.62□□□□□ -0.39
TMOD3-201ENST00000308580 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
TMOD3-201ENST00000308580 ITPRIPQ8IWB1 547 aa12.61□□□□□ -0.39
TMOD3-201ENST00000308580 PANK3Q9H999 370 aa12.61□□□□□ -0.39
TMOD3-201ENST00000308580 PTPRGP23470 1445 aa12.61□□□□□ -0.39
TMOD3-201ENST00000308580 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
TMOD3-201ENST00000308580 CLUAP1Q96AJ1 413 aa12.6□□□□□ -0.39
TMOD3-201ENST00000308580 ZRSR1Q15695 479 aaKnown RBP12.6□□□□□ -0.39
TMOD3-201ENST00000308580 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
TMOD3-201ENST00000308580 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
TMOD3-201ENST00000308580 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
TMOD3-201ENST00000308580 FGD1P98174 961 aa12.59□□□□□ -0.39
TMOD3-201ENST00000308580 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
TMOD3-201ENST00000308580 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
TMOD3-201ENST00000308580 PHLDB1Q86UU1 1377 aa12.58□□□□□ -0.39
TMOD3-201ENST00000308580 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
TMOD3-201ENST00000308580 ZNF644Q9H582 1327 aaPredicted RBP12.58□□□□□ -0.4
TMOD3-201ENST00000308580 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
TMOD3-201ENST00000308580 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
TMOD3-201ENST00000308580 USP47Q96K76 1375 aa12.58□□□□□ -0.4
TMOD3-201ENST00000308580 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
TMOD3-201ENST00000308580 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
TMOD3-201ENST00000308580 KIF21BO75037 1637 aa12.56□□□□□ -0.4
TMOD3-201ENST00000308580 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
TMOD3-201ENST00000308580 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
TMOD3-201ENST00000308580 CENPJQ9HC77 1338 aaPredicted RBP12.56□□□□□ -0.4
TMOD3-201ENST00000308580 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
TMOD3-201ENST00000308580 DNTTIP2Q5QJE6 756 aaKnown RBP12.55□□□□□ -0.4
TMOD3-201ENST00000308580 SLKQ9H2G2 1235 aaPredicted RBP12.55□□□□□ -0.4
TMOD3-201ENST00000308580 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
TMOD3-201ENST00000308580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMOD3-201ENST00000308580 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
TMOD3-201ENST00000308580 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
TMOD3-201ENST00000308580 MYOM3Q5VTT5 1437 aa12.53□□□□□ -0.4
TMOD3-201ENST00000308580 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
TMOD3-201ENST00000308580 MCCP23508 829 aa12.53□□□□□ -0.4
TMOD3-201ENST00000308580 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
TMOD3-201ENST00000308580 PLIN1O60240 522 aa12.52□□□□□ -0.41
TMOD3-201ENST00000308580 NPHP1O15259 732 aa12.51□□□□□ -0.41
TMOD3-201ENST00000308580 LRRC9Q6ZRR7 1453 aa12.51□□□□□ -0.41
TMOD3-201ENST00000308580 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
TMOD3-201ENST00000308580 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
TMOD3-201ENST00000308580 IPO9Q96P70 1041 aaKnown RBP12.5□□□□□ -0.41
TMOD3-201ENST00000308580 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
TMOD3-201ENST00000308580 NAP1L5Q96NT1 182 aaPredicted RBP12.5□□□□□ -0.41
TMOD3-201ENST00000308580 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
TMOD3-201ENST00000308580 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms