RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 LOC105371045A0A1W2PR82 267 aa27.36■■□□□ 1.97
HMGCLL1-202ENST00000308161 ARHGEF40Q8TER5 1519 aa27.35■■□□□ 1.97
HMGCLL1-202ENST00000308161 POGZQ7Z3K3 1410 aa27.33■■□□□ 1.97
HMGCLL1-202ENST00000308161 ZMYM4Q5VZL5 1548 aa27.31■■□□□ 1.96
HMGCLL1-202ENST00000308161 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
HMGCLL1-202ENST00000308161 YEATS2Q9ULM3 1422 aa27.29■■□□□ 1.96
HMGCLL1-202ENST00000308161 CDC42BPBQ9Y5S2 1711 aa27.27■■□□□ 1.96
HMGCLL1-202ENST00000308161 PREX2Q70Z35 1606 aa27.26■■□□□ 1.95
HMGCLL1-202ENST00000308161 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
HMGCLL1-202ENST00000308161 MTUS2Q5JR59 1369 aa27.24■■□□□ 1.95
HMGCLL1-202ENST00000308161 MAGI2Q86UL8 1455 aa27.24■■□□□ 1.95
HMGCLL1-202ENST00000308161 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
HMGCLL1-202ENST00000308161 ZNF777Q9ULD5 760 aaPredicted RBP27.21■■□□□ 1.95
HMGCLL1-202ENST00000308161 BCORL1Q5H9F3 1711 aa27.21■■□□□ 1.95
HMGCLL1-202ENST00000308161 CDC42BPAQ5VT25 1732 aa27.21■■□□□ 1.95
HMGCLL1-202ENST00000308161 ZNF518AQ6AHZ1 1483 aa27.21■■□□□ 1.95
HMGCLL1-202ENST00000308161 ADAMTSL3P82987 1691 aa27.2■■□□□ 1.95
HMGCLL1-202ENST00000308161 MADDQ8WXG6 1647 aa27.17■■□□□ 1.94
HMGCLL1-202ENST00000308161 MLECQ14165 292 aa27.16■■□□□ 1.94
HMGCLL1-202ENST00000308161 ABCC1P33527 1531 aa27.16■■□□□ 1.94
HMGCLL1-202ENST00000308161 PTPRMP28827 1452 aa27.15■■□□□ 1.94
HMGCLL1-202ENST00000308161 GPATCH8Q9UKJ3 1502 aaKnown RBP27.14■■□□□ 1.94
HMGCLL1-202ENST00000308161 CCNB3Q8WWL7 1395 aa27.14■■□□□ 1.94
HMGCLL1-202ENST00000308161 SIGLEC1Q9BZZ2 1709 aa27.14■■□□□ 1.94
HMGCLL1-202ENST00000308161 ARHGEF12Q9NZN5 1544 aa27.14■■□□□ 1.93
HMGCLL1-202ENST00000308161 ATP10AO60312 1499 aa27.13■■□□□ 1.93
HMGCLL1-202ENST00000308161 KDM5CP41229 1560 aa27.13■■□□□ 1.93
HMGCLL1-202ENST00000308161 TRAPPC8Q9Y2L5 1435 aa27.13■■□□□ 1.93
HMGCLL1-202ENST00000308161 EHBP1L1Q8N3D4 1523 aa27.12■■□□□ 1.93
HMGCLL1-202ENST00000308161 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
HMGCLL1-202ENST00000308161 C9orf84Q5VXU9 1444 aa27.11■■□□□ 1.93
HMGCLL1-202ENST00000308161 HECW2Q9P2P5 1572 aa27.11■■□□□ 1.93
HMGCLL1-202ENST00000308161 PLPPR3Q6T4P5 718 aa27.11■■□□□ 1.93
HMGCLL1-202ENST00000308161 CFDP1Q9UEE9 299 aaPredicted RBP27.11■■□□□ 1.93
HMGCLL1-202ENST00000308161 RIMS1Q86UR5 1692 aaKnown RBP27.09■■□□□ 1.93
HMGCLL1-202ENST00000308161 SAMD9LQ8IVG5 1584 aa27.09■■□□□ 1.93
HMGCLL1-202ENST00000308161 VPS8Q8N3P4 1428 aa27.08■■□□□ 1.93
HMGCLL1-202ENST00000308161 SYCP2Q9BX26 1530 aa27.06■■□□□ 1.92
HMGCLL1-202ENST00000308161 HNRNPMP52272 730 aaKnown RBP eCLIP27.05■■□□□ 1.92
HMGCLL1-202ENST00000308161 MLH3Q9UHC1 1453 aa27.04■■□□□ 1.92
HMGCLL1-202ENST00000308161 DIP2CQ9Y2E4 1556 aa27.04■■□□□ 1.92
HMGCLL1-202ENST00000308161 TIAM1Q13009 1591 aa27.03■■□□□ 1.92
HMGCLL1-202ENST00000308161 ABCA6Q8N139 1617 aa27.03■■□□□ 1.92
HMGCLL1-202ENST00000308161 FER1L4A9Z1Z3 1794 aa26.98■■□□□ 1.91
HMGCLL1-202ENST00000308161 PLEKHH2Q8IVE3 1493 aa26.98■■□□□ 1.91
HMGCLL1-202ENST00000308161 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
HMGCLL1-202ENST00000308161 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
HMGCLL1-202ENST00000308161 NCOA2Q15596 1464 aa26.97■■□□□ 1.91
HMGCLL1-202ENST00000308161 KIDINS220Q9ULH0 1771 aa26.96■■□□□ 1.91
HMGCLL1-202ENST00000308161 SUPT6HQ7KZ85 1726 aaKnown RBP26.96■■□□□ 1.91
HMGCLL1-202ENST00000308161 KIAA1107Q9UPP5 1409 aa26.95■■□□□ 1.9
HMGCLL1-202ENST00000308161 REREQ9P2R6 1566 aa26.92■■□□□ 1.9
HMGCLL1-202ENST00000308161 LRRC9Q6ZRR7 1453 aa26.91■■□□□ 1.9
HMGCLL1-202ENST00000308161 ATP7AQ04656 1500 aa26.89■■□□□ 1.89
HMGCLL1-202ENST00000308161 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
HMGCLL1-202ENST00000308161 AGLP35573 1532 aa26.85■■□□□ 1.89
HMGCLL1-202ENST00000308161 CEBPAP49715 358 aaPredicted RBP26.85■■□□□ 1.89
HMGCLL1-202ENST00000308161 ESF1Q9H501 851 aaKnown RBP26.85■■□□□ 1.89
HMGCLL1-202ENST00000308161 INO80Q9ULG1 1556 aaPredicted RBP26.84■■□□□ 1.89
HMGCLL1-202ENST00000308161 CAMSAP2Q08AD1 1489 aa26.83■■□□□ 1.89
HMGCLL1-202ENST00000308161 APLP2Q06481 763 aa26.83■■□□□ 1.89
HMGCLL1-202ENST00000308161 LMTK3Q96Q04 1460 aa26.83■■□□□ 1.88
HMGCLL1-202ENST00000308161 MBD5Q9P267 1494 aa26.83■■□□□ 1.88
HMGCLL1-202ENST00000308161 MAP3K1Q13233 1512 aa26.81■■□□□ 1.88
HMGCLL1-202ENST00000308161 A2MP01023 1474 aa26.78■■□□□ 1.88
HMGCLL1-202ENST00000308161 HSPA2P54652 639 aa26.78■■□□□ 1.88
HMGCLL1-202ENST00000308161 CCDC141Q6ZP82 1450 aa26.77■■□□□ 1.88
HMGCLL1-202ENST00000308161 PLXNC1O60486 1568 aa26.73■■□□□ 1.87
HMGCLL1-202ENST00000308161 ADGBQ8N7X0 1667 aa26.71■■□□□ 1.87
HMGCLL1-202ENST00000308161 GGT6Q6P531 493 aa26.71■■□□□ 1.87
HMGCLL1-202ENST00000308161 RTEL1-TNFRSF6BF6WH68 1400 aa26.71■■□□□ 1.87
HMGCLL1-202ENST00000308161 MYOM3Q5VTT5 1437 aa26.7■■□□□ 1.86
HMGCLL1-202ENST00000308161 RSPH4AQ5TD94 716 aa26.69■■□□□ 1.86
HMGCLL1-202ENST00000308161 C3P01024 1663 aa26.69■■□□□ 1.86
HMGCLL1-202ENST00000308161 CNTLNQ9NXG0 1405 aa26.68■■□□□ 1.86
HMGCLL1-202ENST00000308161 PREX1Q8TCU6 1659 aa26.67■■□□□ 1.86
HMGCLL1-202ENST00000308161 TSPY4P0CV99 314 aa26.66■■□□□ 1.86
HMGCLL1-202ENST00000308161 TSPY10P0CW01 314 aa26.66■■□□□ 1.86
HMGCLL1-202ENST00000308161 ARHGEF5Q12774 1597 aa26.66■■□□□ 1.86
HMGCLL1-202ENST00000308161 UHRF1BP1Q6BDS2 1440 aa26.64■■□□□ 1.85
HMGCLL1-202ENST00000308161 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
HMGCLL1-202ENST00000308161 DHX29Q7Z478 1369 aaKnown RBP26.63■■□□□ 1.85
HMGCLL1-202ENST00000308161 CLTCQ00610 1675 aaKnown RBP26.62■■□□□ 1.85
HMGCLL1-202ENST00000308161 ZMYM3Q14202 1370 aa26.6■■□□□ 1.85
HMGCLL1-202ENST00000308161 KIF3BO15066 747 aa26.6■■□□□ 1.85
HMGCLL1-202ENST00000308161 MROH2AA6NES4 1674 aa26.58■■□□□ 1.85
HMGCLL1-202ENST00000308161 SETD1BQ9UPS6 1966 aaKnown RBP26.56■■□□□ 1.84
HMGCLL1-202ENST00000308161 PTPN23Q9H3S7 1636 aa26.53■■□□□ 1.84
HMGCLL1-202ENST00000308161 ILDR1Q86SU0 546 aaPredicted RBP26.52■■□□□ 1.84
HMGCLL1-202ENST00000308161 PPP6R1Q9UPN7 881 aa26.52■■□□□ 1.84
HMGCLL1-202ENST00000308161 MAST1Q9Y2H9 1570 aa26.52■■□□□ 1.84
HMGCLL1-202ENST00000308161 NPATQ14207 1427 aa26.5■■□□□ 1.83
HMGCLL1-202ENST00000308161 FGD6Q6ZV73 1430 aa26.5■■□□□ 1.83
HMGCLL1-202ENST00000308161 PTPRKQ15262 1439 aa26.46■■□□□ 1.83
HMGCLL1-202ENST00000308161 WASHC2CQ9Y4E1 1318 aa26.45■■□□□ 1.83
HMGCLL1-202ENST00000308161 ABCC5O15440 1437 aa26.45■■□□□ 1.82
HMGCLL1-202ENST00000308161 KDM5DQ9BY66 1539 aa26.44■■□□□ 1.82
HMGCLL1-202ENST00000308161 DAPK1P53355 1430 aa26.42■■□□□ 1.82
HMGCLL1-202ENST00000308161 CROCC2H7BZ55 1655 aa26.42■■□□□ 1.82
HMGCLL1-202ENST00000308161 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms