RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 UHRF1BP1LA0JNW5 1464 aa17.76■□□□□ 0.43
TRIM40-205ENST00000307859 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
TRIM40-205ENST00000307859 ATP10BO94823 1461 aa17.75■□□□□ 0.43
TRIM40-205ENST00000307859 KIF14Q15058 1648 aa17.75■□□□□ 0.43
TRIM40-205ENST00000307859 LMTK3Q96Q04 1460 aa17.74■□□□□ 0.43
TRIM40-205ENST00000307859 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
TRIM40-205ENST00000307859 ITGAEP38570 1179 aa17.73■□□□□ 0.43
TRIM40-205ENST00000307859 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
TRIM40-205ENST00000307859 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
TRIM40-205ENST00000307859 SETD5Q9C0A6 1442 aa17.71■□□□□ 0.43
TRIM40-205ENST00000307859 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
TRIM40-205ENST00000307859 CDC42BPAQ5VT25 1732 aa17.7■□□□□ 0.42
TRIM40-205ENST00000307859 PTPRKQ15262 1439 aa17.68■□□□□ 0.42
TRIM40-205ENST00000307859 GCC2Q8IWJ2 1684 aa17.68■□□□□ 0.42
TRIM40-205ENST00000307859 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
TRIM40-205ENST00000307859 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
TRIM40-205ENST00000307859 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
TRIM40-205ENST00000307859 HFM1A2PYH4 1435 aa17.65■□□□□ 0.42
TRIM40-205ENST00000307859 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
TRIM40-205ENST00000307859 ZCCHC11Q5TAX3 1644 aaKnown RBP17.63■□□□□ 0.41
TRIM40-205ENST00000307859 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
TRIM40-205ENST00000307859 SOCS7O14512 581 aa17.62■□□□□ 0.41
TRIM40-205ENST00000307859 CROCC2H7BZ55 1655 aa17.62■□□□□ 0.41
TRIM40-205ENST00000307859 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
TRIM40-205ENST00000307859 CAMSAP2Q08AD1 1489 aa17.59■□□□□ 0.41
TRIM40-205ENST00000307859 NAIPQ13075 1403 aa17.59■□□□□ 0.41
TRIM40-205ENST00000307859 PREX2Q70Z35 1606 aa17.59■□□□□ 0.41
TRIM40-205ENST00000307859 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.41
TRIM40-205ENST00000307859 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.41
TRIM40-205ENST00000307859 DAPK1P53355 1430 aa17.58■□□□□ 0.4
TRIM40-205ENST00000307859 PTPRMP28827 1452 aa17.56■□□□□ 0.4
TRIM40-205ENST00000307859 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
TRIM40-205ENST00000307859 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
TRIM40-205ENST00000307859 ABCC5O15440 1437 aa17.54■□□□□ 0.4
TRIM40-205ENST00000307859 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
TRIM40-205ENST00000307859 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
TRIM40-205ENST00000307859 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
TRIM40-205ENST00000307859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRIM40-205ENST00000307859 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
TRIM40-205ENST00000307859 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
TRIM40-205ENST00000307859 ILDR2Q71H61 639 aa17.5■□□□□ 0.39
TRIM40-205ENST00000307859 ADAMTSL3P82987 1691 aa17.5■□□□□ 0.39
TRIM40-205ENST00000307859 ARHGEF5Q12774 1597 aa17.49■□□□□ 0.39
TRIM40-205ENST00000307859 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
TRIM40-205ENST00000307859 ADGRL2O95490 1459 aa17.48■□□□□ 0.39
TRIM40-205ENST00000307859 DISP3Q9P2K9 1392 aa17.48■□□□□ 0.39
TRIM40-205ENST00000307859 ARAP3Q8WWN8 1544 aa17.48■□□□□ 0.39
TRIM40-205ENST00000307859 SHANK2Q9UPX8 1470 aa17.47■□□□□ 0.39
TRIM40-205ENST00000307859 CERKQ8TCT0 537 aa17.47■□□□□ 0.39
TRIM40-205ENST00000307859 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
TRIM40-205ENST00000307859 RRP7BPQ9NSQ0 103 aa17.43■□□□□ 0.38
TRIM40-205ENST00000307859 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
TRIM40-205ENST00000307859 MBD5Q9P267 1494 aa17.41■□□□□ 0.38
TRIM40-205ENST00000307859 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
TRIM40-205ENST00000307859 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
TRIM40-205ENST00000307859 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
TRIM40-205ENST00000307859 MAST1Q9Y2H9 1570 aa17.38■□□□□ 0.37
TRIM40-205ENST00000307859 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
TRIM40-205ENST00000307859 ABCA9Q8IUA7 1624 aa17.38■□□□□ 0.37
TRIM40-205ENST00000307859 CCDC141Q6ZP82 1450 aa17.38■□□□□ 0.37
TRIM40-205ENST00000307859 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
TRIM40-205ENST00000307859 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
TRIM40-205ENST00000307859 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
TRIM40-205ENST00000307859 PLCH2O75038 1416 aa17.36■□□□□ 0.37
TRIM40-205ENST00000307859 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
TRIM40-205ENST00000307859 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
TRIM40-205ENST00000307859 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
TRIM40-205ENST00000307859 KIAA1107Q9UPP5 1409 aa17.35■□□□□ 0.37
TRIM40-205ENST00000307859 ABCC1P33527 1531 aa17.33■□□□□ 0.37
TRIM40-205ENST00000307859 MADDQ8WXG6 1647 aa17.33■□□□□ 0.36
TRIM40-205ENST00000307859 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
TRIM40-205ENST00000307859 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
TRIM40-205ENST00000307859 HSPA2P54652 639 aa17.31■□□□□ 0.36
TRIM40-205ENST00000307859 HNRNPMP52272 730 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM40-205ENST00000307859 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
TRIM40-205ENST00000307859 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
TRIM40-205ENST00000307859 ARHGEF12Q9NZN5 1544 aa17.29■□□□□ 0.36
TRIM40-205ENST00000307859 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
TRIM40-205ENST00000307859 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
TRIM40-205ENST00000307859 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.36
TRIM40-205ENST00000307859 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
TRIM40-205ENST00000307859 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
TRIM40-205ENST00000307859 NEO1Q92859 1461 aa17.27■□□□□ 0.35
TRIM40-205ENST00000307859 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.35
TRIM40-205ENST00000307859 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
TRIM40-205ENST00000307859 RAPGEF3O95398 923 aa17.26■□□□□ 0.35
TRIM40-205ENST00000307859 TRIM52Q96A61 297 aa17.26■□□□□ 0.35
TRIM40-205ENST00000307859 PZPP20742 1482 aa17.26■□□□□ 0.35
TRIM40-205ENST00000307859 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
TRIM40-205ENST00000307859 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
TRIM40-205ENST00000307859 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
TRIM40-205ENST00000307859 RIMS1Q86UR5 1692 aaKnown RBP17.23■□□□□ 0.35
TRIM40-205ENST00000307859 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
TRIM40-205ENST00000307859 UNC13BO14795 1591 aa17.21■□□□□ 0.35
TRIM40-205ENST00000307859 FANCAO15360 1455 aa17.21■□□□□ 0.35
TRIM40-205ENST00000307859 CFAP74Q9C0B2 1584 aa17.21■□□□□ 0.35
TRIM40-205ENST00000307859 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
TRIM40-205ENST00000307859 FRMPD1Q5SYB0 1578 aa17.19■□□□□ 0.34
TRIM40-205ENST00000307859 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
TRIM40-205ENST00000307859 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms