RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 WASHC2CQ9Y4E1 1318 aa10.91□□□□□ -0.66
PCDHB1-201ENST00000306549 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
PCDHB1-201ENST00000306549 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
PCDHB1-201ENST00000306549 NPHP1O15259 732 aa10.9□□□□□ -0.66
PCDHB1-201ENST00000306549 ABCA10Q8WWZ4 1543 aa10.9□□□□□ -0.66
PCDHB1-201ENST00000306549 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
PCDHB1-201ENST00000306549 TMF1P82094 1093 aa10.9□□□□□ -0.66
PCDHB1-201ENST00000306549 GGT6Q6P531 493 aa10.9□□□□□ -0.66
PCDHB1-201ENST00000306549 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.67
PCDHB1-201ENST00000306549 RAD54L2Q9Y4B4 1467 aa10.89□□□□□ -0.67
PCDHB1-201ENST00000306549 RGL3Q3MIN7 710 aa10.89□□□□□ -0.67
PCDHB1-201ENST00000306549 POGZQ7Z3K3 1410 aa10.89□□□□□ -0.67
PCDHB1-201ENST00000306549 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
PCDHB1-201ENST00000306549 IGF1RP08069 1367 aa10.88□□□□□ -0.67
PCDHB1-201ENST00000306549 NUP155O75694 1391 aa10.88□□□□□ -0.67
PCDHB1-201ENST00000306549 NESP48681 1621 aa10.87□□□□□ -0.67
PCDHB1-201ENST00000306549 MLECQ14165 292 aa10.87□□□□□ -0.67
PCDHB1-201ENST00000306549 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.67
PCDHB1-201ENST00000306549 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
PCDHB1-201ENST00000306549 SNAPC4Q5SXM2 1469 aa10.86□□□□□ -0.67
PCDHB1-201ENST00000306549 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
PCDHB1-201ENST00000306549 AEBP2Q6ZN18 517 aaPredicted RBP10.85□□□□□ -0.67
PCDHB1-201ENST00000306549 CASKIN1Q8WXD9 1431 aa10.85□□□□□ -0.67
PCDHB1-201ENST00000306549 KIAA0586Q9BVV6 1533 aa10.85□□□□□ -0.67
PCDHB1-201ENST00000306549 KIF3BO15066 747 aa10.85□□□□□ -0.67
PCDHB1-201ENST00000306549 ARXQ96QS3 562 aa10.85□□□□□ -0.67
PCDHB1-201ENST00000306549 HDGFL2Q7Z4V5 671 aaPredicted RBP10.84□□□□□ -0.67
PCDHB1-201ENST00000306549 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.84□□□□□ -0.67
PCDHB1-201ENST00000306549 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
PCDHB1-201ENST00000306549 MS4A1P11836 297 aa10.84□□□□□ -0.67
PCDHB1-201ENST00000306549 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
PCDHB1-201ENST00000306549 ITSN2Q9NZM3 1697 aa10.83□□□□□ -0.68
PCDHB1-201ENST00000306549 MAPK8IP3Q9UPT6 1336 aa10.83□□□□□ -0.68
PCDHB1-201ENST00000306549 KIF14Q15058 1648 aa10.82□□□□□ -0.68
PCDHB1-201ENST00000306549 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
PCDHB1-201ENST00000306549 CALD1Q05682 793 aaKnown RBP10.82□□□□□ -0.68
PCDHB1-201ENST00000306549 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
PCDHB1-201ENST00000306549 CASC1Q6TDU7 716 aa10.82□□□□□ -0.68
PCDHB1-201ENST00000306549 ANP32EQ9BTT0 268 aa10.82□□□□□ -0.68
PCDHB1-201ENST00000306549 GOLGA6L22H0YM25 854 aa10.81□□□□□ -0.68
PCDHB1-201ENST00000306549 CCDC144AA2RUR9 1427 aa10.81□□□□□ -0.68
PCDHB1-201ENST00000306549 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
PCDHB1-201ENST00000306549 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
PCDHB1-201ENST00000306549 PBRM1Q86U86 1689 aa10.8□□□□□ -0.68
PCDHB1-201ENST00000306549 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
PCDHB1-201ENST00000306549 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
PCDHB1-201ENST00000306549 ROCK2O75116 1388 aaKnown RBP10.79□□□□□ -0.68
PCDHB1-201ENST00000306549 MRS2Q9HD23 443 aa10.79□□□□□ -0.68
PCDHB1-201ENST00000306549 HMGB2P26583 209 aaKnown RBP10.79□□□□□ -0.68
PCDHB1-201ENST00000306549 LMOD2Q6P5Q4 547 aa10.79□□□□□ -0.68
PCDHB1-201ENST00000306549 PKD2Q13563 968 aa10.78□□□□□ -0.68
PCDHB1-201ENST00000306549 GTF3C3Q9Y5Q9 886 aa10.78□□□□□ -0.68
PCDHB1-201ENST00000306549 BECN1Q14457 450 aa10.78□□□□□ -0.68
PCDHB1-201ENST00000306549 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
PCDHB1-201ENST00000306549 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.69
PCDHB1-201ENST00000306549 DDX10Q13206 875 aaKnown RBP10.77□□□□□ -0.69
PCDHB1-201ENST00000306549 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
PCDHB1-201ENST00000306549 HDAC5Q9UQL6 1122 aa10.76□□□□□ -0.69
PCDHB1-201ENST00000306549 GRIN2AQ12879 1464 aa10.76□□□□□ -0.69
PCDHB1-201ENST00000306549 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
PCDHB1-201ENST00000306549 TRIM44Q96DX7 344 aaPredicted RBP10.75□□□□□ -0.69
PCDHB1-201ENST00000306549 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
PCDHB1-201ENST00000306549 MPHOSPH9Q99550 1183 aa10.75□□□□□ -0.69
PCDHB1-201ENST00000306549 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
PCDHB1-201ENST00000306549 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
PCDHB1-201ENST00000306549 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
PCDHB1-201ENST00000306549 THOC2Q8NI27 1593 aaKnown RBP10.74□□□□□ -0.69
PCDHB1-201ENST00000306549 GOLGA6L6A8MZA4 724 aa10.74□□□□□ -0.69
PCDHB1-201ENST00000306549 TNNT2P45379 298 aaPredicted RBP10.74□□□□□ -0.69
PCDHB1-201ENST00000306549 TEX14Q8IWB6 1497 aa10.73□□□□□ -0.69
PCDHB1-201ENST00000306549 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
PCDHB1-201ENST00000306549 TROQ12816 1431 aaPredicted RBP10.72□□□□□ -0.69
PCDHB1-201ENST00000306549 LRRC9Q6ZRR7 1453 aa10.72□□□□□ -0.69
PCDHB1-201ENST00000306549 NRDCO43847 1150 aa10.72□□□□□ -0.69
PCDHB1-201ENST00000306549 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
PCDHB1-201ENST00000306549 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
PCDHB1-201ENST00000306549 SCAPERQ9BY12 1400 aa10.71□□□□□ -0.69
PCDHB1-201ENST00000306549 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 FOXD1Q16676 465 aa10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 RTF1Q92541 710 aaKnown RBP10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 CFAP65Q6ZU64 1925 aaKnown RBP10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 CLSTN1O94985 981 aa10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 TMX4Q9H1E5 349 aaPredicted RBP10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 FGD6Q6ZV73 1430 aa10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
PCDHB1-201ENST00000306549 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
PCDHB1-201ENST00000306549 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
PCDHB1-201ENST00000306549 PTMAP06454 111 aaKnown RBP10.69□□□□□ -0.7
PCDHB1-201ENST00000306549 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
PCDHB1-201ENST00000306549 WDR62O43379 1518 aa10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 KTN1Q86UP2 1357 aaKnown RBP10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 MAP3K1Q13233 1512 aa10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 FGD1P98174 961 aa10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 CFAP74Q9C0B2 1584 aa10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 FKBP8Q14318 412 aa10.68□□□□□ -0.7
PCDHB1-201ENST00000306549 MORC1Q86VD1 984 aa10.67□□□□□ -0.7
PCDHB1-201ENST00000306549 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms