RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 APPP05067 770 aa10.22□□□□□ -0.77
PCNX1-201ENST00000304743 PES1O00541 588 aaKnown RBP10.22□□□□□ -0.77
PCNX1-201ENST00000304743 TONSLQ96HA7 1378 aa10.22□□□□□ -0.77
PCNX1-201ENST00000304743 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
PCNX1-201ENST00000304743 TSR1Q2NL82 804 aaKnown RBP10.21□□□□□ -0.77
PCNX1-201ENST00000304743 HMMRO75330 724 aa10.21□□□□□ -0.78
PCNX1-201ENST00000304743 CCAR1Q8IX12 1150 aaKnown RBP10.21□□□□□ -0.78
PCNX1-201ENST00000304743 FOXD1Q16676 465 aa10.2□□□□□ -0.78
PCNX1-201ENST00000304743 SEPT11Q9NVA2 429 aaKnown RBP10.2□□□□□ -0.78
PCNX1-201ENST00000304743 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
PCNX1-201ENST00000304743 CCDC43Q96MW1 224 aaKnown RBP10.19□□□□□ -0.78
PCNX1-201ENST00000304743 CSB-PGBD3P0DP91 1061 aa10.19□□□□□ -0.78
PCNX1-201ENST00000304743 RAD21O60216 631 aa10.19□□□□□ -0.78
PCNX1-201ENST00000304743 POGKQ9P215 609 aa10.19□□□□□ -0.78
PCNX1-201ENST00000304743 LOC105371045A0A1W2PR82 267 aa10.18□□□□□ -0.78
PCNX1-201ENST00000304743 TPM2P07951 284 aa10.18□□□□□ -0.78
PCNX1-201ENST00000304743 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
PCNX1-201ENST00000304743 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
PCNX1-201ENST00000304743 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
PCNX1-201ENST00000304743 CHMP3Q9Y3E7 222 aa10.17□□□□□ -0.78
PCNX1-201ENST00000304743 CCDC70Q6NSX1 233 aa10.17□□□□□ -0.78
PCNX1-201ENST00000304743 RTF1Q92541 710 aaKnown RBP10.17□□□□□ -0.78
PCNX1-201ENST00000304743 TPD52L1Q16890 204 aaPredicted RBP10.16□□□□□ -0.78
PCNX1-201ENST00000304743 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
PCNX1-201ENST00000304743 MS4A1P11836 297 aa10.15□□□□□ -0.78
PCNX1-201ENST00000304743 CT47A1Q5JQC4 288 aaPredicted RBP10.15□□□□□ -0.78
PCNX1-201ENST00000304743 TOMM22Q9NS69 142 aa10.15□□□□□ -0.78
PCNX1-201ENST00000304743 SOX12O15370 315 aa10.15□□□□□ -0.78
PCNX1-201ENST00000304743 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
PCNX1-201ENST00000304743 AMOTL1Q8IY63 956 aa10.15□□□□□ -0.79
PCNX1-201ENST00000304743 NOL10Q9BSC4 688 aaKnown RBP10.14□□□□□ -0.79
PCNX1-201ENST00000304743 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
PCNX1-201ENST00000304743 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
PCNX1-201ENST00000304743 RDXP35241 583 aaKnown RBP10.13□□□□□ -0.79
PCNX1-201ENST00000304743 KAT6BQ8WYB5 2073 aa10.12□□□□□ -0.79
PCNX1-201ENST00000304743 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
PCNX1-201ENST00000304743 CHMP7Q8WUX9 453 aaPredicted RBP10.12□□□□□ -0.79
PCNX1-201ENST00000304743 ZRSR2Q15696 482 aaKnown RBP10.12□□□□□ -0.79
PCNX1-201ENST00000304743 ZFYVE27Q5T4F4 411 aa10.12□□□□□ -0.79
PCNX1-201ENST00000304743 PABPN1Q86U42 306 aaKnown RBP eCLIP10.12□□□□□ -0.79
PCNX1-201ENST00000304743 HSCBQ8IWL3 235 aa10.11□□□□□ -0.79
PCNX1-201ENST00000304743 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
PCNX1-201ENST00000304743 MEX3CQ5U5Q3 659 aaKnown RBP10.11□□□□□ -0.79
PCNX1-201ENST00000304743 AKAP17AQ02040 695 aaKnown RBP10.1□□□□□ -0.79
PCNX1-201ENST00000304743 PAK3O75914 559 aaPredicted RBP10.1□□□□□ -0.79
PCNX1-201ENST00000304743 FRAT1Q92837 279 aaPredicted RBP10.1□□□□□ -0.79
PCNX1-201ENST00000304743 TPM1P09493 284 aa10.09□□□□□ -0.79
PCNX1-201ENST00000304743 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
PCNX1-201ENST00000304743 CHMP4AQ9BY43 222 aa10.09□□□□□ -0.79
PCNX1-201ENST00000304743 CDR1P51861 262 aa10.09□□□□□ -0.79
PCNX1-201ENST00000304743 U2SURPO15042 1029 aaKnown RBP10.09□□□□□ -0.79
PCNX1-201ENST00000304743 TMEM132AQ24JP5 1023 aa10.09□□□□□ -0.79
PCNX1-201ENST00000304743 IPO7O95373 1038 aaKnown RBP10.09□□□□□ -0.79
PCNX1-201ENST00000304743 GPS2Q13227 327 aa10.08□□□□□ -0.8
PCNX1-201ENST00000304743 SYAP1Q96A49 352 aaPredicted RBP10.07□□□□□ -0.8
PCNX1-201ENST00000304743 SF3A1Q15459 793 aaKnown RBP10.07□□□□□ -0.8
PCNX1-201ENST00000304743 TMEM87AQ8NBN3 555 aa10.07□□□□□ -0.8
PCNX1-201ENST00000304743 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
PCNX1-201ENST00000304743 CCDC47Q96A33 483 aaKnown RBP10.07□□□□□ -0.8
PCNX1-201ENST00000304743 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
PCNX1-201ENST00000304743 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
PCNX1-201ENST00000304743 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
PCNX1-201ENST00000304743 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
PCNX1-201ENST00000304743 KIF3AQ9Y496 699 aa10.05□□□□□ -0.8
PCNX1-201ENST00000304743 STK11IPQ8N1F8 1099 aa10.05□□□□□ -0.8
PCNX1-201ENST00000304743 SAMD1Q6SPF0 538 aaPredicted RBP10.05□□□□□ -0.8
PCNX1-201ENST00000304743 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
PCNX1-201ENST00000304743 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
PCNX1-201ENST00000304743 DDX10Q13206 875 aaKnown RBP10.04□□□□□ -0.8
PCNX1-201ENST00000304743 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
PCNX1-201ENST00000304743 MAP7D2Q96T17 732 aa10.04□□□□□ -0.8
PCNX1-201ENST00000304743 CHIC2Q9UKJ5 165 aa10.04□□□□□ -0.8
PCNX1-201ENST00000304743 NEXNQ0ZGT2 675 aa10.04□□□□□ -0.8
PCNX1-201ENST00000304743 PTMSP20962 102 aa10.04□□□□□ -0.8
PCNX1-201ENST00000304743 ARID3AQ99856 593 aa10.04□□□□□ -0.8
PCNX1-201ENST00000304743 CCDC191Q8NCU4 936 aa10.03□□□□□ -0.8
PCNX1-201ENST00000304743 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
PCNX1-201ENST00000304743 HSP90AB2PQ58FF8 381 aa10.03□□□□□ -0.8
PCNX1-201ENST00000304743 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
PCNX1-201ENST00000304743 HMGN5P82970 282 aaKnown RBP10.03□□□□□ -0.8
PCNX1-201ENST00000304743 SUPT16HQ9Y5B9 1047 aaKnown RBP10.03□□□□□ -0.8
PCNX1-201ENST00000304743 HOMER1Q86YM7 354 aa10.02□□□□□ -0.8
PCNX1-201ENST00000304743 RGL3Q3MIN7 710 aa10.02□□□□□ -0.81
PCNX1-201ENST00000304743 SYNE3Q6ZMZ3 975 aa10.02□□□□□ -0.81
PCNX1-201ENST00000304743 IRX6P78412 446 aaPredicted RBP10.01□□□□□ -0.81
PCNX1-201ENST00000304743 ANKRD20A12PQ8NF67 263 aa10.01□□□□□ -0.81
PCNX1-201ENST00000304743 CCDC173Q0VFZ6 552 aa10□□□□□ -0.81
PCNX1-201ENST00000304743 RGS3P49796 1198 aa10□□□□□ -0.81
PCNX1-201ENST00000304743 SF3B2Q13435 895 aaKnown RBP10□□□□□ -0.81
PCNX1-201ENST00000304743 ANKRD18AQ8IVF6 992 aa10□□□□□ -0.81
PCNX1-201ENST00000304743 RUFY1Q96T51 708 aa10□□□□□ -0.81
PCNX1-201ENST00000304743 EPS15P42566 896 aa10□□□□□ -0.81
PCNX1-201ENST00000304743 CBX1P83916 185 aa10□□□□□ -0.81
PCNX1-201ENST00000304743 APBB1O00213 710 aa9.99□□□□□ -0.81
PCNX1-201ENST00000304743 DCTN1Q14203 1278 aa9.99□□□□□ -0.81
PCNX1-201ENST00000304743 PPP1R1BQ9UD71 204 aaPredicted RBP9.99□□□□□ -0.81
PCNX1-201ENST00000304743 NEFHP12036 1026 aa9.99□□□□□ -0.81
PCNX1-201ENST00000304743 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
PCNX1-201ENST00000304743 MLECQ14165 292 aa9.99□□□□□ -0.81
PCNX1-201ENST00000304743 EVA1CP58658 441 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms