RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 ADGRL1O94910 1474 aa44.97■■■■■ 4.79
COPS6-201ENST00000303904 CCNB3Q8WWL7 1395 aa44.96■■■■■ 4.79
COPS6-201ENST00000303904 RAPGEF3O95398 923 aa44.93■■■■■ 4.78
COPS6-201ENST00000303904 LRRC9Q6ZRR7 1453 aa44.91■■■■■ 4.78
COPS6-201ENST00000303904 CDC42BPBQ9Y5S2 1711 aa44.9■■■■■ 4.78
COPS6-201ENST00000303904 SCAPERQ9BY12 1400 aa44.9■■■■■ 4.78
COPS6-201ENST00000303904 CDC42BPAQ5VT25 1732 aa44.89■■■■■ 4.78
COPS6-201ENST00000303904 SUPT6HQ7KZ85 1726 aaKnown RBP44.89■■■■■ 4.78
COPS6-201ENST00000303904 GPATCH8Q9UKJ3 1502 aaKnown RBP44.88■■■■■ 4.78
COPS6-201ENST00000303904 CFDP1Q9UEE9 299 aaPredicted RBP44.84■■■■■ 4.77
COPS6-201ENST00000303904 NCOA2Q15596 1464 aa44.8■■■■■ 4.76
COPS6-201ENST00000303904 RICTORQ6R327 1708 aa44.79■■■■■ 4.76
COPS6-201ENST00000303904 ITSN2Q9NZM3 1697 aa44.79■■■■■ 4.76
COPS6-201ENST00000303904 FRMPD1Q5SYB0 1578 aa44.78■■■■■ 4.76
COPS6-201ENST00000303904 POGZQ7Z3K3 1410 aa44.78■■■■■ 4.76
COPS6-201ENST00000303904 ZNF777Q9ULD5 760 aaPredicted RBP44.77■■■■■ 4.76
COPS6-201ENST00000303904 KANK4Q5T7N3 995 aaPredicted RBP44.74■■■■■ 4.75
COPS6-201ENST00000303904 ZNF518AQ6AHZ1 1483 aa44.73■■■■■ 4.75
COPS6-201ENST00000303904 PLEKHH2Q8IVE3 1493 aa44.71■■■■■ 4.75
COPS6-201ENST00000303904 ABCC1P33527 1531 aa44.7■■■■■ 4.75
COPS6-201ENST00000303904 ZMYM4Q5VZL5 1548 aa44.7■■■■■ 4.75
COPS6-201ENST00000303904 MAGI2Q86UL8 1455 aa44.7■■■■■ 4.75
COPS6-201ENST00000303904 SAMD9LQ8IVG5 1584 aa44.63■■■■■ 4.74
COPS6-201ENST00000303904 KIAA1107Q9UPP5 1409 aa44.61■■■■■ 4.73
COPS6-201ENST00000303904 AFAP1Q8N556 730 aa44.59■■■■■ 4.73
COPS6-201ENST00000303904 ZFYVE16Q7Z3T8 1539 aa44.58■■■■■ 4.73
COPS6-201ENST00000303904 ARHGEF40Q8TER5 1519 aa44.58■■■■■ 4.73
COPS6-201ENST00000303904 MYT1LQ9UL68 1186 aa44.58■■■■■ 4.73
COPS6-201ENST00000303904 KDM5CP41229 1560 aa44.56■■■■■ 4.72
COPS6-201ENST00000303904 SYCP2Q9BX26 1530 aa44.55■■■■■ 4.72
COPS6-201ENST00000303904 ARHGEF12Q9NZN5 1544 aa44.55■■■■■ 4.72
COPS6-201ENST00000303904 TRAPPC8Q9Y2L5 1435 aa44.53■■■■■ 4.72
COPS6-201ENST00000303904 HNRNPMP52272 730 aaKnown RBP eCLIP44.5■■■■■ 4.71
COPS6-201ENST00000303904 MYOM3Q5VTT5 1437 aa44.49■■■■■ 4.71
COPS6-201ENST00000303904 HECW2Q9P2P5 1572 aa44.48■■■■■ 4.71
COPS6-201ENST00000303904 MLH3Q9UHC1 1453 aa44.46■■■■■ 4.71
COPS6-201ENST00000303904 MIA2Q96PC5 1412 aa44.46■■■■■ 4.71
COPS6-201ENST00000303904 YEATS2Q9ULM3 1422 aa44.46■■■■■ 4.71
COPS6-201ENST00000303904 ZNF644Q9H582 1327 aaPredicted RBP44.45■■■■■ 4.71
COPS6-201ENST00000303904 CAMSAP2Q08AD1 1489 aa44.43■■■■■ 4.7
COPS6-201ENST00000303904 ARID4BQ4LE39 1312 aaPredicted RBP44.42■■■■■ 4.7
COPS6-201ENST00000303904 RSPH4AQ5TD94 716 aa44.41■■■■■ 4.7
COPS6-201ENST00000303904 AEBP2Q6ZN18 517 aaPredicted RBP44.41■■■■■ 4.7
COPS6-201ENST00000303904 SPAG9O60271 1321 aaKnown RBP44.4■■■■■ 4.7
COPS6-201ENST00000303904 ATP10AO60312 1499 aa44.39■■■■■ 4.7
COPS6-201ENST00000303904 KDM4FA0A1W2PPD8 638 aa44.34■■■■■ 4.69
COPS6-201ENST00000303904 C9orf84Q5VXU9 1444 aa44.34■■■■■ 4.69
COPS6-201ENST00000303904 MBD5Q9P267 1494 aa44.34■■■■■ 4.69
COPS6-201ENST00000303904 CCDC141Q6ZP82 1450 aa44.29■■■■■ 4.68
COPS6-201ENST00000303904 DIP2CQ9Y2E4 1556 aa44.26■■■■■ 4.68
COPS6-201ENST00000303904 KIDINS220Q9ULH0 1771 aa44.25■■■■■ 4.67
COPS6-201ENST00000303904 ATP7AQ04656 1500 aa44.25■■■■■ 4.67
COPS6-201ENST00000303904 ARHGEF5Q12774 1597 aa44.23■■■■■ 4.67
COPS6-201ENST00000303904 TSPY4P0CV99 314 aa44.23■■■■■ 4.67
COPS6-201ENST00000303904 TSPY10P0CW01 314 aa44.23■■■■■ 4.67
COPS6-201ENST00000303904 FGD6Q6ZV73 1430 aa44.22■■■■■ 4.67
COPS6-201ENST00000303904 ABCA6Q8N139 1617 aa44.22■■■■■ 4.67
COPS6-201ENST00000303904 RTEL1-TNFRSF6BF6WH68 1400 aa44.21■■■■■ 4.67
COPS6-201ENST00000303904 REREQ9P2R6 1566 aa44.2■■■■■ 4.67
COPS6-201ENST00000303904 INO80Q9ULG1 1556 aaPredicted RBP44.2■■■■■ 4.67
COPS6-201ENST00000303904 PTPN23Q9H3S7 1636 aa44.17■■■■■ 4.66
COPS6-201ENST00000303904 BCORL1Q5H9F3 1711 aa44.15■■■■■ 4.66
COPS6-201ENST00000303904 TCOF1Q13428 1488 aaKnown RBP44.09■■■■■ 4.65
COPS6-201ENST00000303904 ADAMTSL3P82987 1691 aa44.07■■■■■ 4.64
COPS6-201ENST00000303904 AGLP35573 1532 aa44.06■■■■■ 4.64
COPS6-201ENST00000303904 MLECQ14165 292 aa44.06■■■■■ 4.64
COPS6-201ENST00000303904 SIGLEC1Q9BZZ2 1709 aa44.04■■■■■ 4.64
COPS6-201ENST00000303904 A2MP01023 1474 aa44.04■■■■■ 4.64
COPS6-201ENST00000303904 PPARGC1BQ86YN6 1023 aaKnown RBP44.03■■■■■ 4.64
COPS6-201ENST00000303904 ADGBQ8N7X0 1667 aa44.02■■■■■ 4.64
COPS6-201ENST00000303904 FAM50AQ14320 339 aaKnown RBP43.99■■■■■ 4.63
COPS6-201ENST00000303904 MAST1Q9Y2H9 1570 aa43.98■■■■■ 4.63
COPS6-201ENST00000303904 MADDQ8WXG6 1647 aa43.95■■■■■ 4.63
COPS6-201ENST00000303904 SHANK2Q9UPX8 1470 aa43.94■■■■■ 4.62
COPS6-201ENST00000303904 PLXNC1O60486 1568 aa43.93■■■■■ 4.62
COPS6-201ENST00000303904 DAPK1P53355 1430 aa43.93■■■■■ 4.62
COPS6-201ENST00000303904 DNMT1P26358 1616 aaKnown RBP43.93■■■■■ 4.62
COPS6-201ENST00000303904 ABCC5O15440 1437 aa43.92■■■■■ 4.62
COPS6-201ENST00000303904 DHX29Q7Z478 1369 aaKnown RBP43.91■■■■■ 4.62
COPS6-201ENST00000303904 ESF1Q9H501 851 aaKnown RBP43.9■■■■■ 4.62
COPS6-201ENST00000303904 PTPRMP28827 1452 aa43.88■■■■■ 4.61
COPS6-201ENST00000303904 CROCC2H7BZ55 1655 aa43.86■■■■■ 4.61
COPS6-201ENST00000303904 FER1L4A9Z1Z3 1794 aa43.86■■■■■ 4.61
COPS6-201ENST00000303904 RIMS1Q86UR5 1692 aaKnown RBP43.83■■■■■ 4.61
COPS6-201ENST00000303904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.76■■■■■ 4.69e-7■■□□□ 13.7
COPS6-201ENST00000303904 ANKRD30AQ9BXX3 1397 aa43.76■■■■■ 4.6
COPS6-201ENST00000303904 GGT6Q6P531 493 aa43.75■■■■■ 4.59
COPS6-201ENST00000303904 PPP6R1Q9UPN7 881 aa43.75■■■■■ 4.59
COPS6-201ENST00000303904 CNTLNQ9NXG0 1405 aa43.75■■■■■ 4.59
COPS6-201ENST00000303904 KIF3BO15066 747 aa43.73■■■■■ 4.59
COPS6-201ENST00000303904 DUOX2Q9NRD8 1548 aa43.72■■■■■ 4.59
COPS6-201ENST00000303904 KIF15Q9NS87 1388 aa43.72■■■■■ 4.59
COPS6-201ENST00000303904 CHIC2Q9UKJ5 165 aa43.71■■■■■ 4.59
COPS6-201ENST00000303904 RRP7BPQ9NSQ0 103 aa43.68■■■■■ 4.58
COPS6-201ENST00000303904 RRBP1Q9P2E9 1410 aaKnown RBP43.65■■■■■ 4.58
COPS6-201ENST00000303904 PLPPR3Q6T4P5 718 aa43.64■■■■■ 4.58
COPS6-201ENST00000303904 EIF2AK4Q9P2K8 1649 aaKnown RBP43.63■■■■■ 4.58
COPS6-201ENST00000303904 ADGRL2O95490 1459 aa43.63■■■■■ 4.57
COPS6-201ENST00000303904 NCOA1Q15788 1441 aa43.62■■■■■ 4.57
COPS6-201ENST00000303904 ERBINQ96RT1 1412 aa43.61■■■■■ 4.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms