RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ADGRL1O94910 1474 aa26.76■■□□□ 1.87
NDUFA3-201ENST00000303553 RICTORQ6R327 1708 aa26.75■■□□□ 1.87
NDUFA3-201ENST00000303553 FRMPD1Q5SYB0 1578 aa26.75■■□□□ 1.87
NDUFA3-201ENST00000303553 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
NDUFA3-201ENST00000303553 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
NDUFA3-201ENST00000303553 RAPGEF3O95398 923 aa26.7■■□□□ 1.86
NDUFA3-201ENST00000303553 ITSN2Q9NZM3 1697 aa26.7■■□□□ 1.86
NDUFA3-201ENST00000303553 SCAPERQ9BY12 1400 aa26.68■■□□□ 1.86
NDUFA3-201ENST00000303553 ZMYM4Q5VZL5 1548 aa26.68■■□□□ 1.86
NDUFA3-201ENST00000303553 CCNB3Q8WWL7 1395 aa26.68■■□□□ 1.86
NDUFA3-201ENST00000303553 POGZQ7Z3K3 1410 aa26.67■■□□□ 1.86
NDUFA3-201ENST00000303553 GPATCH8Q9UKJ3 1502 aaKnown RBP26.66■■□□□ 1.86
NDUFA3-201ENST00000303553 LRRC9Q6ZRR7 1453 aa26.64■■□□□ 1.86
NDUFA3-201ENST00000303553 APLP2Q06481 763 aa26.64■■□□□ 1.86
NDUFA3-201ENST00000303553 ABCC1P33527 1531 aa26.64■■□□□ 1.85
NDUFA3-201ENST00000303553 ZNF518AQ6AHZ1 1483 aa26.63■■□□□ 1.85
NDUFA3-201ENST00000303553 ARHGEF40Q8TER5 1519 aa26.62■■□□□ 1.85
NDUFA3-201ENST00000303553 MAGI2Q86UL8 1455 aa26.62■■□□□ 1.85
NDUFA3-201ENST00000303553 NCOA2Q15596 1464 aa26.6■■□□□ 1.85
NDUFA3-201ENST00000303553 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
NDUFA3-201ENST00000303553 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
NDUFA3-201ENST00000303553 CFDP1Q9UEE9 299 aaPredicted RBP26.58■■□□□ 1.85
NDUFA3-201ENST00000303553 ZFYVE16Q7Z3T8 1539 aa26.58■■□□□ 1.85
NDUFA3-201ENST00000303553 KDM5CP41229 1560 aa26.57■■□□□ 1.84
NDUFA3-201ENST00000303553 ZNF777Q9ULD5 760 aaPredicted RBP26.53■■□□□ 1.84
NDUFA3-201ENST00000303553 HECW2Q9P2P5 1572 aa26.53■■□□□ 1.84
NDUFA3-201ENST00000303553 SYCP2Q9BX26 1530 aa26.52■■□□□ 1.84
NDUFA3-201ENST00000303553 KIAA1107Q9UPP5 1409 aa26.51■■□□□ 1.83
NDUFA3-201ENST00000303553 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
NDUFA3-201ENST00000303553 ARHGEF12Q9NZN5 1544 aa26.49■■□□□ 1.83
NDUFA3-201ENST00000303553 KANK4Q5T7N3 995 aaPredicted RBP26.47■■□□□ 1.83
NDUFA3-201ENST00000303553 YEATS2Q9ULM3 1422 aa26.47■■□□□ 1.83
NDUFA3-201ENST00000303553 TRAPPC8Q9Y2L5 1435 aa26.47■■□□□ 1.83
NDUFA3-201ENST00000303553 AFAP1Q8N556 730 aa26.46■■□□□ 1.83
NDUFA3-201ENST00000303553 MLH3Q9UHC1 1453 aa26.46■■□□□ 1.83
NDUFA3-201ENST00000303553 KDM4FA0A1W2PPD8 638 aa26.44■■□□□ 1.82
NDUFA3-201ENST00000303553 MYT1LQ9UL68 1186 aa26.43■■□□□ 1.82
NDUFA3-201ENST00000303553 ATP10AO60312 1499 aa26.42■■□□□ 1.82
NDUFA3-201ENST00000303553 C9orf84Q5VXU9 1444 aa26.42■■□□□ 1.82
NDUFA3-201ENST00000303553 CAMSAP2Q08AD1 1489 aa26.41■■□□□ 1.82
NDUFA3-201ENST00000303553 MYOM3Q5VTT5 1437 aa26.4■■□□□ 1.82
NDUFA3-201ENST00000303553 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.82
NDUFA3-201ENST00000303553 BCORL1Q5H9F3 1711 aa26.39■■□□□ 1.82
NDUFA3-201ENST00000303553 DIP2CQ9Y2E4 1556 aa26.39■■□□□ 1.82
NDUFA3-201ENST00000303553 HNRNPMP52272 730 aaKnown RBP eCLIP26.39■■□□□ 1.82
NDUFA3-201ENST00000303553 ABCA6Q8N139 1617 aa26.39■■□□□ 1.81
NDUFA3-201ENST00000303553 MIA2Q96PC5 1412 aa26.39■■□□□ 1.81
NDUFA3-201ENST00000303553 KIDINS220Q9ULH0 1771 aa26.38■■□□□ 1.81
NDUFA3-201ENST00000303553 REREQ9P2R6 1566 aa26.37■■□□□ 1.81
NDUFA3-201ENST00000303553 INO80Q9ULG1 1556 aaPredicted RBP26.36■■□□□ 1.81
NDUFA3-201ENST00000303553 ATP7AQ04656 1500 aa26.35■■□□□ 1.81
NDUFA3-201ENST00000303553 MBD5Q9P267 1494 aa26.35■■□□□ 1.81
NDUFA3-201ENST00000303553 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
NDUFA3-201ENST00000303553 ZNF644Q9H582 1327 aaPredicted RBP26.35■■□□□ 1.81
NDUFA3-201ENST00000303553 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
NDUFA3-201ENST00000303553 RSPH4AQ5TD94 716 aa26.33■■□□□ 1.81
NDUFA3-201ENST00000303553 CCDC141Q6ZP82 1450 aa26.33■■□□□ 1.81
NDUFA3-201ENST00000303553 ARHGEF5Q12774 1597 aa26.33■■□□□ 1.8
NDUFA3-201ENST00000303553 SIGLEC1Q9BZZ2 1709 aa26.32■■□□□ 1.8
NDUFA3-201ENST00000303553 RTEL1-TNFRSF6BF6WH68 1400 aa26.27■■□□□ 1.8
NDUFA3-201ENST00000303553 ADGBQ8N7X0 1667 aa26.27■■□□□ 1.8
NDUFA3-201ENST00000303553 MADDQ8WXG6 1647 aa26.26■■□□□ 1.79
NDUFA3-201ENST00000303553 PTPN23Q9H3S7 1636 aa26.26■■□□□ 1.79
NDUFA3-201ENST00000303553 AGLP35573 1532 aa26.26■■□□□ 1.79
NDUFA3-201ENST00000303553 FGD6Q6ZV73 1430 aa26.23■■□□□ 1.79
NDUFA3-201ENST00000303553 FER1L4A9Z1Z3 1794 aa26.23■■□□□ 1.79
NDUFA3-201ENST00000303553 RIMS1Q86UR5 1692 aaKnown RBP26.2■■□□□ 1.78
NDUFA3-201ENST00000303553 TSPY4P0CV99 314 aa26.2■■□□□ 1.78
NDUFA3-201ENST00000303553 TSPY10P0CW01 314 aa26.2■■□□□ 1.78
NDUFA3-201ENST00000303553 PLXNC1O60486 1568 aa26.2■■□□□ 1.78
NDUFA3-201ENST00000303553 A2MP01023 1474 aa26.19■■□□□ 1.78
NDUFA3-201ENST00000303553 MAST1Q9Y2H9 1570 aa26.19■■□□□ 1.78
NDUFA3-201ENST00000303553 TCOF1Q13428 1488 aaKnown RBP26.18■■□□□ 1.78
NDUFA3-201ENST00000303553 PTPRMP28827 1452 aa26.17■■□□□ 1.78
NDUFA3-201ENST00000303553 MLECQ14165 292 aa26.17■■□□□ 1.78
NDUFA3-201ENST00000303553 CROCC2H7BZ55 1655 aa26.16■■□□□ 1.78
NDUFA3-201ENST00000303553 DNMT1P26358 1616 aaKnown RBP26.14■■□□□ 1.77
NDUFA3-201ENST00000303553 SHANK2Q9UPX8 1470 aa26.13■■□□□ 1.77
NDUFA3-201ENST00000303553 DHX29Q7Z478 1369 aaKnown RBP26.08■■□□□ 1.77
NDUFA3-201ENST00000303553 DAPK1P53355 1430 aa26.07■■□□□ 1.76
NDUFA3-201ENST00000303553 ESF1Q9H501 851 aaKnown RBP26.07■■□□□ 1.76
NDUFA3-201ENST00000303553 ABCC5O15440 1437 aa26.05■■□□□ 1.76
NDUFA3-201ENST00000303553 CNTLNQ9NXG0 1405 aa26.05■■□□□ 1.76
NDUFA3-201ENST00000303553 MROH2AA6NES4 1674 aa26.01■■□□□ 1.75
NDUFA3-201ENST00000303553 FAM50AQ14320 339 aaKnown RBP26.01■■□□□ 1.75
NDUFA3-201ENST00000303553 EIF2AK4Q9P2K8 1649 aaKnown RBP26.01■■□□□ 1.75
NDUFA3-201ENST00000303553 DUOX2Q9NRD8 1548 aa26■■□□□ 1.75
NDUFA3-201ENST00000303553 PPP6R1Q9UPN7 881 aa25.99■■□□□ 1.75
NDUFA3-201ENST00000303553 FAM135AQ9P2D6 1515 aa25.98■■□□□ 1.75
NDUFA3-201ENST00000303553 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
NDUFA3-201ENST00000303553 C3P01024 1663 aa25.96■■□□□ 1.75
NDUFA3-201ENST00000303553 ANKRD30AQ9BXX3 1397 aa25.95■■□□□ 1.75
NDUFA3-201ENST00000303553 GGT6Q6P531 493 aa25.95■■□□□ 1.74
NDUFA3-201ENST00000303553 CLTCQ00610 1675 aaKnown RBP25.95■■□□□ 1.74
NDUFA3-201ENST00000303553 KIF15Q9NS87 1388 aa25.95■■□□□ 1.74
NDUFA3-201ENST00000303553 KIF3BO15066 747 aa25.94■■□□□ 1.74
NDUFA3-201ENST00000303553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.94■■□□□ 1.742e-6■■■■□ 19.8
NDUFA3-201ENST00000303553 RNF17Q9BXT8 1623 aaKnown RBP25.93■■□□□ 1.74
NDUFA3-201ENST00000303553 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
NDUFA3-201ENST00000303553 ERBINQ96RT1 1412 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms