RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ZNF777Q9ULD5 760 aaPredicted RBP19.42■□□□□ 0.7
CCDC7-202ENST00000302316 MYO5CQ9NQX4 1742 aa19.41■□□□□ 0.7
CCDC7-202ENST00000302316 DNMT1P26358 1616 aaKnown RBP19.41■□□□□ 0.7
CCDC7-202ENST00000302316 CDC42BPBQ9Y5S2 1711 aa19.4■□□□□ 0.7
CCDC7-202ENST00000302316 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
CCDC7-202ENST00000302316 DAPK1P53355 1430 aa19.39■□□□□ 0.69
CCDC7-202ENST00000302316 SETD5Q9C0A6 1442 aa19.39■□□□□ 0.69
CCDC7-202ENST00000302316 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
CCDC7-202ENST00000302316 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
CCDC7-202ENST00000302316 ABCC5O15440 1437 aa19.36■□□□□ 0.69
CCDC7-202ENST00000302316 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
CCDC7-202ENST00000302316 SAMD9LQ8IVG5 1584 aa19.35■□□□□ 0.69
CCDC7-202ENST00000302316 CHIC2Q9UKJ5 165 aa19.34■□□□□ 0.69
CCDC7-202ENST00000302316 PLCH2O75038 1416 aa19.33■□□□□ 0.69
CCDC7-202ENST00000302316 ABCA9Q8IUA7 1624 aa19.33■□□□□ 0.68
CCDC7-202ENST00000302316 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
CCDC7-202ENST00000302316 CROCC2H7BZ55 1655 aa19.32■□□□□ 0.68
CCDC7-202ENST00000302316 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
CCDC7-202ENST00000302316 NAIPQ13075 1403 aa19.31■□□□□ 0.68
CCDC7-202ENST00000302316 GCC2Q8IWJ2 1684 aa19.3■□□□□ 0.68
CCDC7-202ENST00000302316 MAPKBP1O60336 1514 aa19.29■□□□□ 0.68
CCDC7-202ENST00000302316 ARAP3Q8WWN8 1544 aa19.29■□□□□ 0.68
CCDC7-202ENST00000302316 ARHGEF5Q12774 1597 aa19.29■□□□□ 0.68
CCDC7-202ENST00000302316 ROCK1Q13464 1354 aa19.28■□□□□ 0.68
CCDC7-202ENST00000302316 SYCP2Q9BX26 1530 aa19.28■□□□□ 0.68
CCDC7-202ENST00000302316 RRP7BPQ9NSQ0 103 aa19.28■□□□□ 0.68
CCDC7-202ENST00000302316 ADGBQ8N7X0 1667 aa19.27■□□□□ 0.68
CCDC7-202ENST00000302316 PLEKHH2Q8IVE3 1493 aa19.27■□□□□ 0.68
CCDC7-202ENST00000302316 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
CCDC7-202ENST00000302316 MBD5Q9P267 1494 aa19.27■□□□□ 0.67
CCDC7-202ENST00000302316 SHANK2Q9UPX8 1470 aa19.27■□□□□ 0.67
CCDC7-202ENST00000302316 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.67
CCDC7-202ENST00000302316 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
CCDC7-202ENST00000302316 HNRNPMP52272 730 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC7-202ENST00000302316 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
CCDC7-202ENST00000302316 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
CCDC7-202ENST00000302316 C9orf84Q5VXU9 1444 aa19.23■□□□□ 0.67
CCDC7-202ENST00000302316 ABCC1P33527 1531 aa19.23■□□□□ 0.67
CCDC7-202ENST00000302316 FANCAO15360 1455 aa19.22■□□□□ 0.67
CCDC7-202ENST00000302316 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
CCDC7-202ENST00000302316 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
CCDC7-202ENST00000302316 RSPH4AQ5TD94 716 aa19.21■□□□□ 0.67
CCDC7-202ENST00000302316 NCOA1Q15788 1441 aa19.2■□□□□ 0.66
CCDC7-202ENST00000302316 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
CCDC7-202ENST00000302316 ARHGEF12Q9NZN5 1544 aa19.2■□□□□ 0.66
CCDC7-202ENST00000302316 CD109Q6YHK3 1445 aa19.19■□□□□ 0.66
CCDC7-202ENST00000302316 KDM6BO15054 1643 aa19.18■□□□□ 0.66
CCDC7-202ENST00000302316 CLSPNQ9HAW4 1339 aa19.17■□□□□ 0.66
CCDC7-202ENST00000302316 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
CCDC7-202ENST00000302316 CFAP74Q9C0B2 1584 aa19.15■□□□□ 0.66
CCDC7-202ENST00000302316 ADGRL1O94910 1474 aa19.14■□□□□ 0.65
CCDC7-202ENST00000302316 GLI2P10070 1586 aa19.13■□□□□ 0.65
CCDC7-202ENST00000302316 TRAPPC8Q9Y2L5 1435 aa19.13■□□□□ 0.65
CCDC7-202ENST00000302316 DIP2BQ9P265 1576 aa19.12■□□□□ 0.65
CCDC7-202ENST00000302316 MAP3K4Q9Y6R4 1608 aa19.12■□□□□ 0.65
CCDC7-202ENST00000302316 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
CCDC7-202ENST00000302316 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
CCDC7-202ENST00000302316 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
CCDC7-202ENST00000302316 PLXNC1O60486 1568 aa19.09■□□□□ 0.65
CCDC7-202ENST00000302316 TRIM52Q96A61 297 aa19.09■□□□□ 0.65
CCDC7-202ENST00000302316 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
CCDC7-202ENST00000302316 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
CCDC7-202ENST00000302316 NEO1Q92859 1461 aa19.06■□□□□ 0.64
CCDC7-202ENST00000302316 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
CCDC7-202ENST00000302316 AFAP1Q8N556 730 aa19.05■□□□□ 0.64
CCDC7-202ENST00000302316 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
CCDC7-202ENST00000302316 RTEL1-TNFRSF6BF6WH68 1400 aa19.03■□□□□ 0.64
CCDC7-202ENST00000302316 INO80Q9ULG1 1556 aaPredicted RBP19.03■□□□□ 0.64
CCDC7-202ENST00000302316 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.64
CCDC7-202ENST00000302316 ATP7AQ04656 1500 aa19.01■□□□□ 0.63
CCDC7-202ENST00000302316 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
CCDC7-202ENST00000302316 POGZQ7Z3K3 1410 aa19■□□□□ 0.63
CCDC7-202ENST00000302316 MPHOSPH9Q99550 1183 aa18.98■□□□□ 0.63
CCDC7-202ENST00000302316 DENND4BO75064 1496 aaPredicted RBP18.98■□□□□ 0.63
CCDC7-202ENST00000302316 KDM5CP41229 1560 aa18.97■□□□□ 0.63
CCDC7-202ENST00000302316 ERBINQ96RT1 1412 aa18.97■□□□□ 0.63
CCDC7-202ENST00000302316 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
CCDC7-202ENST00000302316 PZPP20742 1482 aa18.97■□□□□ 0.63
CCDC7-202ENST00000302316 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
CCDC7-202ENST00000302316 TSPOAP1O95153 1857 aa18.96■□□□□ 0.63
CCDC7-202ENST00000302316 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
CCDC7-202ENST00000302316 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
CCDC7-202ENST00000302316 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
CCDC7-202ENST00000302316 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
CCDC7-202ENST00000302316 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
CCDC7-202ENST00000302316 UNC13BO14795 1591 aa18.93■□□□□ 0.62
CCDC7-202ENST00000302316 HECW2Q9P2P5 1572 aa18.93■□□□□ 0.62
CCDC7-202ENST00000302316 NUP155O75694 1391 aa18.93■□□□□ 0.62
CCDC7-202ENST00000302316 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
CCDC7-202ENST00000302316 NEUROD1Q13562 356 aa18.91■□□□□ 0.62
CCDC7-202ENST00000302316 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
CCDC7-202ENST00000302316 RICTORQ6R327 1708 aa18.91■□□□□ 0.62
CCDC7-202ENST00000302316 RAPGEF3O95398 923 aa18.9■□□□□ 0.62
CCDC7-202ENST00000302316 FOXD1Q16676 465 aa18.88■□□□□ 0.61
CCDC7-202ENST00000302316 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
CCDC7-202ENST00000302316 MAGI2Q86UL8 1455 aa18.87■□□□□ 0.61
CCDC7-202ENST00000302316 FAM135AQ9P2D6 1515 aa18.87■□□□□ 0.61
CCDC7-202ENST00000302316 FRMPD1Q5SYB0 1578 aa18.87■□□□□ 0.61
CCDC7-202ENST00000302316 DHX29Q7Z478 1369 aaKnown RBP18.86■□□□□ 0.61
CCDC7-202ENST00000302316 EIF2AK4Q9P2K8 1649 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms