RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SCAPERQ9BY12 1400 aa28.85■■■□□ 2.21
SPSB3-201ENST00000301717 CDC42BPBQ9Y5S2 1711 aa28.84■■■□□ 2.21
SPSB3-201ENST00000301717 PREX2Q70Z35 1606 aa28.84■■■□□ 2.21
SPSB3-201ENST00000301717 GPATCH8Q9UKJ3 1502 aaKnown RBP28.82■■■□□ 2.2
SPSB3-201ENST00000301717 CDC42BPAQ5VT25 1732 aa28.81■■■□□ 2.2
SPSB3-201ENST00000301717 KANK4Q5T7N3 995 aaPredicted RBP28.8■■■□□ 2.2
SPSB3-201ENST00000301717 RICTORQ6R327 1708 aa28.8■■■□□ 2.2
SPSB3-201ENST00000301717 ZNF777Q9ULD5 760 aaPredicted RBP28.77■■■□□ 2.2
SPSB3-201ENST00000301717 CCNB3Q8WWL7 1395 aa28.77■■■□□ 2.2
SPSB3-201ENST00000301717 POGZQ7Z3K3 1410 aa28.76■■■□□ 2.2
SPSB3-201ENST00000301717 LRRC9Q6ZRR7 1453 aa28.76■■■□□ 2.2
SPSB3-201ENST00000301717 ARHGEF12Q9NZN5 1544 aa28.74■■■□□ 2.19
SPSB3-201ENST00000301717 KDM4FA0A1W2PPD8 638 aa28.74■■■□□ 2.19
SPSB3-201ENST00000301717 NCOA2Q15596 1464 aa28.73■■■□□ 2.19
SPSB3-201ENST00000301717 AFAP1Q8N556 730 aa28.71■■■□□ 2.19
SPSB3-201ENST00000301717 CFDP1Q9UEE9 299 aaPredicted RBP28.71■■■□□ 2.19
SPSB3-201ENST00000301717 YEATS2Q9ULM3 1422 aa28.71■■■□□ 2.19
SPSB3-201ENST00000301717 ABCC1P33527 1531 aa28.7■■■□□ 2.19
SPSB3-201ENST00000301717 SAMD9LQ8IVG5 1584 aa28.7■■■□□ 2.18
SPSB3-201ENST00000301717 MAP3K1Q13233 1512 aa28.69■■■□□ 2.18
SPSB3-201ENST00000301717 TRAPPC8Q9Y2L5 1435 aa28.68■■■□□ 2.18
SPSB3-201ENST00000301717 ZMYM4Q5VZL5 1548 aa28.68■■■□□ 2.18
SPSB3-201ENST00000301717 SUPT6HQ7KZ85 1726 aaKnown RBP28.68■■■□□ 2.18
SPSB3-201ENST00000301717 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
SPSB3-201ENST00000301717 ARHGEF40Q8TER5 1519 aa28.65■■■□□ 2.18
SPSB3-201ENST00000301717 HNRNPMP52272 730 aaKnown RBP eCLIP28.64■■■□□ 2.18
SPSB3-201ENST00000301717 APLP2Q06481 763 aa28.64■■■□□ 2.18
SPSB3-201ENST00000301717 SYCP2Q9BX26 1530 aa28.64■■■□□ 2.17
SPSB3-201ENST00000301717 ZNF518AQ6AHZ1 1483 aa28.63■■■□□ 2.17
SPSB3-201ENST00000301717 ZFYVE16Q7Z3T8 1539 aa28.63■■■□□ 2.17
SPSB3-201ENST00000301717 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
SPSB3-201ENST00000301717 ITSN2Q9NZM3 1697 aa28.62■■■□□ 2.17
SPSB3-201ENST00000301717 KDM5CP41229 1560 aa28.6■■■□□ 2.17
SPSB3-201ENST00000301717 MYT1LQ9UL68 1186 aa28.58■■■□□ 2.17
SPSB3-201ENST00000301717 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
SPSB3-201ENST00000301717 ARID4BQ4LE39 1312 aaPredicted RBP28.56■■■□□ 2.16
SPSB3-201ENST00000301717 SIGLEC1Q9BZZ2 1709 aa28.54■■■□□ 2.16
SPSB3-201ENST00000301717 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
SPSB3-201ENST00000301717 HECW2Q9P2P5 1572 aa28.52■■■□□ 2.16
SPSB3-201ENST00000301717 CAMSAP2Q08AD1 1489 aa28.51■■■□□ 2.15
SPSB3-201ENST00000301717 PLEKHH2Q8IVE3 1493 aa28.51■■■□□ 2.15
SPSB3-201ENST00000301717 MLH3Q9UHC1 1453 aa28.49■■■□□ 2.15
SPSB3-201ENST00000301717 MBD5Q9P267 1494 aa28.48■■■□□ 2.15
SPSB3-201ENST00000301717 ATP10AO60312 1499 aa28.48■■■□□ 2.15
SPSB3-201ENST00000301717 ABCA6Q8N139 1617 aa28.47■■■□□ 2.15
SPSB3-201ENST00000301717 DIP2CQ9Y2E4 1556 aa28.47■■■□□ 2.15
SPSB3-201ENST00000301717 SPAG9O60271 1321 aaKnown RBP28.46■■■□□ 2.15
SPSB3-201ENST00000301717 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
SPSB3-201ENST00000301717 KIDINS220Q9ULH0 1771 aa28.45■■■□□ 2.14
SPSB3-201ENST00000301717 C9orf84Q5VXU9 1444 aa28.44■■■□□ 2.14
SPSB3-201ENST00000301717 MLECQ14165 292 aa28.43■■■□□ 2.14
SPSB3-201ENST00000301717 PPARGC1BQ86YN6 1023 aaKnown RBP28.43■■■□□ 2.14
SPSB3-201ENST00000301717 BCORL1Q5H9F3 1711 aa28.4■■■□□ 2.14
SPSB3-201ENST00000301717 ATP7AQ04656 1500 aa28.38■■■□□ 2.13
SPSB3-201ENST00000301717 ADAMTSL3P82987 1691 aa28.38■■■□□ 2.13
SPSB3-201ENST00000301717 INO80Q9ULG1 1556 aaPredicted RBP28.37■■■□□ 2.13
SPSB3-201ENST00000301717 MIA2Q96PC5 1412 aa28.36■■■□□ 2.13
SPSB3-201ENST00000301717 CCDC141Q6ZP82 1450 aa28.36■■■□□ 2.13
SPSB3-201ENST00000301717 MADDQ8WXG6 1647 aa28.35■■■□□ 2.13
SPSB3-201ENST00000301717 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
SPSB3-201ENST00000301717 ARHGEF5Q12774 1597 aa28.3■■■□□ 2.12
SPSB3-201ENST00000301717 REREQ9P2R6 1566 aa28.3■■■□□ 2.12
SPSB3-201ENST00000301717 PTPN23Q9H3S7 1636 aa28.28■■■□□ 2.12
SPSB3-201ENST00000301717 PTPRMP28827 1452 aa28.28■■■□□ 2.12
SPSB3-201ENST00000301717 PLPPR3Q6T4P5 718 aa28.26■■■□□ 2.12
SPSB3-201ENST00000301717 RIMS1Q86UR5 1692 aaKnown RBP28.25■■■□□ 2.11
SPSB3-201ENST00000301717 RSPH4AQ5TD94 716 aa28.25■■■□□ 2.11
SPSB3-201ENST00000301717 A2MP01023 1474 aa28.25■■■□□ 2.11
SPSB3-201ENST00000301717 RTEL1-TNFRSF6BF6WH68 1400 aa28.24■■■□□ 2.11
SPSB3-201ENST00000301717 AGLP35573 1532 aa28.23■■■□□ 2.11
SPSB3-201ENST00000301717 TCOF1Q13428 1488 aaKnown RBP28.22■■■□□ 2.11
SPSB3-201ENST00000301717 TSPY4P0CV99 314 aa28.22■■■□□ 2.11
SPSB3-201ENST00000301717 TSPY10P0CW01 314 aa28.22■■■□□ 2.11
SPSB3-201ENST00000301717 PLXNC1O60486 1568 aa28.2■■■□□ 2.11
SPSB3-201ENST00000301717 ABCC5O15440 1437 aa28.2■■■□□ 2.11
SPSB3-201ENST00000301717 FAM50AQ14320 339 aaKnown RBP28.18■■■□□ 2.1
SPSB3-201ENST00000301717 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
SPSB3-201ENST00000301717 ADGBQ8N7X0 1667 aa28.18■■■□□ 2.1
SPSB3-201ENST00000301717 DAPK1P53355 1430 aa28.15■■■□□ 2.1
SPSB3-201ENST00000301717 DHX29Q7Z478 1369 aaKnown RBP28.14■■■□□ 2.1
SPSB3-201ENST00000301717 MAST1Q9Y2H9 1570 aa28.14■■■□□ 2.1
SPSB3-201ENST00000301717 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
SPSB3-201ENST00000301717 GGT6Q6P531 493 aa28.12■■■□□ 2.09
SPSB3-201ENST00000301717 DNMT1P26358 1616 aaKnown RBP28.12■■■□□ 2.09
SPSB3-201ENST00000301717 CHIC2Q9UKJ5 165 aa28.11■■■□□ 2.09
SPSB3-201ENST00000301717 CROCC2H7BZ55 1655 aa28.09■■■□□ 2.09
SPSB3-201ENST00000301717 KIF3BO15066 747 aa28.08■■■□□ 2.09
SPSB3-201ENST00000301717 SHANK2Q9UPX8 1470 aa28.07■■■□□ 2.08
SPSB3-201ENST00000301717 RRP7BPQ9NSQ0 103 aa28.06■■■□□ 2.08
SPSB3-201ENST00000301717 ESF1Q9H501 851 aaKnown RBP28.04■■■□□ 2.08
SPSB3-201ENST00000301717 KIF15Q9NS87 1388 aa28.03■■■□□ 2.08
SPSB3-201ENST00000301717 PTPRKQ15262 1439 aa28.01■■■□□ 2.07
SPSB3-201ENST00000301717 ITGAEP38570 1179 aa27.98■■■□□ 2.07
SPSB3-201ENST00000301717 CLTCQ00610 1675 aaKnown RBP27.96■■■□□ 2.07
SPSB3-201ENST00000301717 DUOX2Q9NRD8 1548 aa27.96■■■□□ 2.07
SPSB3-201ENST00000301717 C3P01024 1663 aa27.96■■■□□ 2.07
SPSB3-201ENST00000301717 CNTLNQ9NXG0 1405 aa27.96■■■□□ 2.07
SPSB3-201ENST00000301717 ANKRD30AQ9BXX3 1397 aa27.94■■■□□ 2.06
SPSB3-201ENST00000301717 NCOA1Q15788 1441 aa27.94■■■□□ 2.06
SPSB3-201ENST00000301717 ZMYM3Q14202 1370 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms