RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 POGZQ7Z3K3 1410 aa29.35■■■□□ 2.29
TMEM88-201ENST00000301599 ARHGAP5Q13017 1502 aa29.34■■■□□ 2.29
TMEM88-201ENST00000301599 ARHGEF40Q8TER5 1519 aa29.33■■■□□ 2.29
TMEM88-201ENST00000301599 YEATS2Q9ULM3 1422 aa29.32■■■□□ 2.28
TMEM88-201ENST00000301599 ZFYVE16Q7Z3T8 1539 aa29.31■■■□□ 2.28
TMEM88-201ENST00000301599 ADAMTSL3P82987 1691 aa29.31■■■□□ 2.28
TMEM88-201ENST00000301599 AFAP1Q8N556 730 aa29.3■■■□□ 2.28
TMEM88-201ENST00000301599 PTPRMP28827 1452 aa29.28■■■□□ 2.28
TMEM88-201ENST00000301599 BCORL1Q5H9F3 1711 aa29.26■■■□□ 2.27
TMEM88-201ENST00000301599 MYT1LQ9UL68 1186 aa29.25■■■□□ 2.27
TMEM88-201ENST00000301599 ZNF518AQ6AHZ1 1483 aa29.24■■■□□ 2.27
TMEM88-201ENST00000301599 ATP10AO60312 1499 aa29.23■■■□□ 2.27
TMEM88-201ENST00000301599 CEP162Q5TB80 1403 aa29.22■■■□□ 2.27
TMEM88-201ENST00000301599 HECW2Q9P2P5 1572 aa29.22■■■□□ 2.27
TMEM88-201ENST00000301599 CDC42BPBQ9Y5S2 1711 aa29.2■■■□□ 2.27
TMEM88-201ENST00000301599 MLECQ14165 292 aa29.2■■■□□ 2.26
TMEM88-201ENST00000301599 LOC105371045A0A1W2PR82 267 aa29.18■■■□□ 2.26
TMEM88-201ENST00000301599 ZNF777Q9ULD5 760 aaPredicted RBP29.18■■■□□ 2.26
TMEM88-201ENST00000301599 PREX2Q70Z35 1606 aa29.16■■■□□ 2.26
TMEM88-201ENST00000301599 MADDQ8WXG6 1647 aa29.16■■■□□ 2.26
TMEM88-201ENST00000301599 MTUS2Q5JR59 1369 aa29.16■■■□□ 2.26
TMEM88-201ENST00000301599 C9orf84Q5VXU9 1444 aa29.15■■■□□ 2.26
TMEM88-201ENST00000301599 CFDP1Q9UEE9 299 aaPredicted RBP29.13■■■□□ 2.25
TMEM88-201ENST00000301599 GPATCH8Q9UKJ3 1502 aaKnown RBP29.13■■■□□ 2.25
TMEM88-201ENST00000301599 KDM5CP41229 1560 aa29.13■■■□□ 2.25
TMEM88-201ENST00000301599 TRAPPC8Q9Y2L5 1435 aa29.12■■■□□ 2.25
TMEM88-201ENST00000301599 ARHGEF12Q9NZN5 1544 aa29.12■■■□□ 2.25
TMEM88-201ENST00000301599 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
TMEM88-201ENST00000301599 MLH3Q9UHC1 1453 aa29.1■■■□□ 2.25
TMEM88-201ENST00000301599 CDC42BPAQ5VT25 1732 aa29.09■■■□□ 2.25
TMEM88-201ENST00000301599 ABCC1P33527 1531 aa29.09■■■□□ 2.25
TMEM88-201ENST00000301599 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
TMEM88-201ENST00000301599 PLPPR3Q6T4P5 718 aa29.08■■■□□ 2.25
TMEM88-201ENST00000301599 HNRNPMP52272 730 aaKnown RBP eCLIP29.07■■■□□ 2.24
TMEM88-201ENST00000301599 RIMS1Q86UR5 1692 aaKnown RBP29.06■■■□□ 2.24
TMEM88-201ENST00000301599 ITSN2Q9NZM3 1697 aa29.01■■■□□ 2.23
TMEM88-201ENST00000301599 KIAA1107Q9UPP5 1409 aa29.01■■■□□ 2.23
TMEM88-201ENST00000301599 SPAG9O60271 1321 aaKnown RBP29■■■□□ 2.23
TMEM88-201ENST00000301599 PLEKHH2Q8IVE3 1493 aa29■■■□□ 2.23
TMEM88-201ENST00000301599 DIP2CQ9Y2E4 1556 aa28.99■■■□□ 2.23
TMEM88-201ENST00000301599 SAMD9LQ8IVG5 1584 aa28.98■■■□□ 2.23
TMEM88-201ENST00000301599 EHBP1L1Q8N3D4 1523 aa28.97■■■□□ 2.23
TMEM88-201ENST00000301599 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
TMEM88-201ENST00000301599 ESF1Q9H501 851 aaKnown RBP28.94■■■□□ 2.22
TMEM88-201ENST00000301599 ABCA6Q8N139 1617 aa28.94■■■□□ 2.22
TMEM88-201ENST00000301599 SYCP2Q9BX26 1530 aa28.94■■■□□ 2.22
TMEM88-201ENST00000301599 FER1L4A9Z1Z3 1794 aa28.93■■■□□ 2.22
TMEM88-201ENST00000301599 CEBPAP49715 358 aaPredicted RBP28.92■■■□□ 2.22
TMEM88-201ENST00000301599 ZNF644Q9H582 1327 aaPredicted RBP28.92■■■□□ 2.22
TMEM88-201ENST00000301599 LMTK3Q96Q04 1460 aa28.91■■■□□ 2.22
TMEM88-201ENST00000301599 KIDINS220Q9ULH0 1771 aa28.91■■■□□ 2.22
TMEM88-201ENST00000301599 AGLP35573 1532 aa28.91■■■□□ 2.22
TMEM88-201ENST00000301599 VPS8Q8N3P4 1428 aa28.91■■■□□ 2.22
TMEM88-201ENST00000301599 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
TMEM88-201ENST00000301599 HSPA2P54652 639 aa28.87■■■□□ 2.21
TMEM88-201ENST00000301599 NCOA2Q15596 1464 aa28.85■■■□□ 2.21
TMEM88-201ENST00000301599 RSPH4AQ5TD94 716 aa28.82■■■□□ 2.2
TMEM88-201ENST00000301599 ILDR1Q86SU0 546 aaPredicted RBP28.82■■■□□ 2.2
TMEM88-201ENST00000301599 ATP7AQ04656 1500 aa28.81■■■□□ 2.2
TMEM88-201ENST00000301599 MBD5Q9P267 1494 aa28.8■■■□□ 2.2
TMEM88-201ENST00000301599 SUPT6HQ7KZ85 1726 aaKnown RBP28.8■■■□□ 2.2
TMEM88-201ENST00000301599 LRRC9Q6ZRR7 1453 aa28.78■■■□□ 2.2
TMEM88-201ENST00000301599 CNTLNQ9NXG0 1405 aa28.77■■■□□ 2.2
TMEM88-201ENST00000301599 A2MP01023 1474 aa28.76■■■□□ 2.19
TMEM88-201ENST00000301599 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
TMEM88-201ENST00000301599 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
TMEM88-201ENST00000301599 MAP3K1Q13233 1512 aa28.74■■■□□ 2.19
TMEM88-201ENST00000301599 INO80Q9ULG1 1556 aaPredicted RBP28.74■■■□□ 2.19
TMEM88-201ENST00000301599 APLP2Q06481 763 aa28.73■■■□□ 2.19
TMEM88-201ENST00000301599 SETD1BQ9UPS6 1966 aaKnown RBP28.73■■■□□ 2.19
TMEM88-201ENST00000301599 GGT6Q6P531 493 aa28.72■■■□□ 2.19
TMEM88-201ENST00000301599 PPP6R1Q9UPN7 881 aa28.72■■■□□ 2.19
TMEM88-201ENST00000301599 TSPY4P0CV99 314 aa28.7■■■□□ 2.18
TMEM88-201ENST00000301599 TSPY10P0CW01 314 aa28.7■■■□□ 2.18
TMEM88-201ENST00000301599 UHRF1BP1Q6BDS2 1440 aa28.69■■■□□ 2.18
TMEM88-201ENST00000301599 CAMSAP2Q08AD1 1489 aa28.68■■■□□ 2.18
TMEM88-201ENST00000301599 ZMYM3Q14202 1370 aa28.68■■■□□ 2.18
TMEM88-201ENST00000301599 PREX1Q8TCU6 1659 aa28.67■■■□□ 2.18
TMEM88-201ENST00000301599 CCDC141Q6ZP82 1450 aa28.67■■■□□ 2.18
TMEM88-201ENST00000301599 DHX29Q7Z478 1369 aaKnown RBP28.67■■■□□ 2.18
TMEM88-201ENST00000301599 PLXNC1O60486 1568 aa28.66■■■□□ 2.18
TMEM88-201ENST00000301599 C3P01024 1663 aa28.65■■■□□ 2.18
TMEM88-201ENST00000301599 DMRT2Q9Y5R5 561 aa28.63■■■□□ 2.17
TMEM88-201ENST00000301599 ADGBQ8N7X0 1667 aa28.63■■■□□ 2.17
TMEM88-201ENST00000301599 KIF3BO15066 747 aa28.6■■■□□ 2.17
TMEM88-201ENST00000301599 NPATQ14207 1427 aa28.59■■■□□ 2.17
TMEM88-201ENST00000301599 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
TMEM88-201ENST00000301599 MIA2Q96PC5 1412 aa28.58■■■□□ 2.17
TMEM88-201ENST00000301599 MYOM3Q5VTT5 1437 aa28.57■■■□□ 2.16
TMEM88-201ENST00000301599 ARHGEF5Q12774 1597 aa28.57■■■□□ 2.16
TMEM88-201ENST00000301599 MROH2AA6NES4 1674 aa28.56■■■□□ 2.16
TMEM88-201ENST00000301599 CLTCQ00610 1675 aaKnown RBP28.51■■■□□ 2.15
TMEM88-201ENST00000301599 WASHC2CQ9Y4E1 1318 aa28.48■■■□□ 2.15
TMEM88-201ENST00000301599 PTPRKQ15262 1439 aa28.48■■■□□ 2.15
TMEM88-201ENST00000301599 CERKQ8TCT0 537 aa28.45■■■□□ 2.14
TMEM88-201ENST00000301599 STRCQ7RTU9 1775 aa28.44■■■□□ 2.14
TMEM88-201ENST00000301599 MAST1Q9Y2H9 1570 aa28.41■■■□□ 2.14
TMEM88-201ENST00000301599 PTPRTO14522 1441 aa28.41■■■□□ 2.14
TMEM88-201ENST00000301599 NCOA1Q15788 1441 aa28.38■■■□□ 2.13
TMEM88-201ENST00000301599 FBXO31Q5XUX0 539 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms