RNA–Protein interactions for RNA: ENST00000298876.8

SMCO2-201, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMCO2, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-201ENST00000298876 FANCAO15360 1455 aa13.09□□□□□ -0.31
SMCO2-201ENST00000298876 MTUS2Q5JR59 1369 aa13.08□□□□□ -0.31
SMCO2-201ENST00000298876 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
SMCO2-201ENST00000298876 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
SMCO2-201ENST00000298876 PLCH2O75038 1416 aa13.07□□□□□ -0.32
SMCO2-201ENST00000298876 AKNAQ7Z591 1439 aa13.06□□□□□ -0.32
SMCO2-201ENST00000298876 DENND4BO75064 1496 aaPredicted RBP13.05□□□□□ -0.32
SMCO2-201ENST00000298876 COL17A1Q9UMD9 1497 aaPredicted RBP13.05□□□□□ -0.32
SMCO2-201ENST00000298876 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
SMCO2-201ENST00000298876 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
SMCO2-201ENST00000298876 TTC37Q6PGP7 1564 aa13.04□□□□□ -0.32
SMCO2-201ENST00000298876 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
SMCO2-201ENST00000298876 ARHGAP5Q13017 1502 aa13.03□□□□□ -0.32
SMCO2-201ENST00000298876 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
SMCO2-201ENST00000298876 ADGRL1O94910 1474 aa13.02□□□□□ -0.33
SMCO2-201ENST00000298876 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
SMCO2-201ENST00000298876 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
SMCO2-201ENST00000298876 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
SMCO2-201ENST00000298876 SCAPERQ9BY12 1400 aa13.01□□□□□ -0.33
SMCO2-201ENST00000298876 ARID4BQ4LE39 1312 aaPredicted RBP13□□□□□ -0.33
SMCO2-201ENST00000298876 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
SMCO2-201ENST00000298876 LRRIQ1Q96JM4 1722 aa12.99□□□□□ -0.33
SMCO2-201ENST00000298876 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
SMCO2-201ENST00000298876 MAGI2Q86UL8 1455 aa12.96□□□□□ -0.34
SMCO2-201ENST00000298876 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
SMCO2-201ENST00000298876 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
SMCO2-201ENST00000298876 PLEKHH2Q8IVE3 1493 aa12.93□□□□□ -0.34
SMCO2-201ENST00000298876 PREX2Q70Z35 1606 aa12.93□□□□□ -0.34
SMCO2-201ENST00000298876 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
SMCO2-201ENST00000298876 KDM4FA0A1W2PPD8 638 aa12.92□□□□□ -0.34
SMCO2-201ENST00000298876 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
SMCO2-201ENST00000298876 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
SMCO2-201ENST00000298876 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
SMCO2-201ENST00000298876 ZFYVE16Q7Z3T8 1539 aa12.91□□□□□ -0.34
SMCO2-201ENST00000298876 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
SMCO2-201ENST00000298876 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.34
SMCO2-201ENST00000298876 RICTORQ6R327 1708 aa12.9□□□□□ -0.34
SMCO2-201ENST00000298876 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.34
SMCO2-201ENST00000298876 ZMYM4Q5VZL5 1548 aa12.89□□□□□ -0.35
SMCO2-201ENST00000298876 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMCO2-201ENST00000298876 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
SMCO2-201ENST00000298876 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
SMCO2-201ENST00000298876 FRMPD1Q5SYB0 1578 aa12.89□□□□□ -0.35
SMCO2-201ENST00000298876 SPAG9O60271 1321 aaKnown RBP12.88□□□□□ -0.35
SMCO2-201ENST00000298876 CDC42BPBQ9Y5S2 1711 aa12.88□□□□□ -0.35
SMCO2-201ENST00000298876 ITSN2Q9NZM3 1697 aa12.88□□□□□ -0.35
SMCO2-201ENST00000298876 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
SMCO2-201ENST00000298876 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
SMCO2-201ENST00000298876 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
SMCO2-201ENST00000298876 ATP10AO60312 1499 aa12.87□□□□□ -0.35
SMCO2-201ENST00000298876 ESF1Q9H501 851 aaKnown RBP12.87□□□□□ -0.35
SMCO2-201ENST00000298876 ABCC1P33527 1531 aa12.87□□□□□ -0.35
SMCO2-201ENST00000298876 TSPY4P0CV99 314 aa12.86□□□□□ -0.35
SMCO2-201ENST00000298876 TSPY10P0CW01 314 aa12.86□□□□□ -0.35
SMCO2-201ENST00000298876 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
SMCO2-201ENST00000298876 MLECQ14165 292 aa12.85□□□□□ -0.35
SMCO2-201ENST00000298876 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
SMCO2-201ENST00000298876 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
SMCO2-201ENST00000298876 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
SMCO2-201ENST00000298876 TRAPPC8Q9Y2L5 1435 aa12.85□□□□□ -0.35
SMCO2-201ENST00000298876 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
SMCO2-201ENST00000298876 HECW2Q9P2P5 1572 aa12.84□□□□□ -0.35
SMCO2-201ENST00000298876 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.35
SMCO2-201ENST00000298876 KDM5CP41229 1560 aa12.83□□□□□ -0.36
SMCO2-201ENST00000298876 SAMD9LQ8IVG5 1584 aa12.83□□□□□ -0.36
SMCO2-201ENST00000298876 ZNF644Q9H582 1327 aaPredicted RBP12.83□□□□□ -0.36
SMCO2-201ENST00000298876 ARHGEF12Q9NZN5 1544 aa12.82□□□□□ -0.36
SMCO2-201ENST00000298876 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
SMCO2-201ENST00000298876 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
SMCO2-201ENST00000298876 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
SMCO2-201ENST00000298876 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
SMCO2-201ENST00000298876 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.37
SMCO2-201ENST00000298876 ATP7AQ04656 1500 aa12.77□□□□□ -0.37
SMCO2-201ENST00000298876 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
SMCO2-201ENST00000298876 DIP2CQ9Y2E4 1556 aa12.76□□□□□ -0.37
SMCO2-201ENST00000298876 PTPRMP28827 1452 aa12.75□□□□□ -0.37
SMCO2-201ENST00000298876 MBD5Q9P267 1494 aa12.75□□□□□ -0.37
SMCO2-201ENST00000298876 REREQ9P2R6 1566 aa12.75□□□□□ -0.37
SMCO2-201ENST00000298876 A2MP01023 1474 aa12.74□□□□□ -0.37
SMCO2-201ENST00000298876 ADAMTSL3P82987 1691 aa12.73□□□□□ -0.37
SMCO2-201ENST00000298876 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
SMCO2-201ENST00000298876 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
SMCO2-201ENST00000298876 GGT6Q6P531 493 aa12.73□□□□□ -0.37
SMCO2-201ENST00000298876 AGLP35573 1532 aa12.72□□□□□ -0.37
SMCO2-201ENST00000298876 KIDINS220Q9ULH0 1771 aa12.72□□□□□ -0.37
SMCO2-201ENST00000298876 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
SMCO2-201ENST00000298876 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
SMCO2-201ENST00000298876 INO80Q9ULG1 1556 aaPredicted RBP12.71□□□□□ -0.37
SMCO2-201ENST00000298876 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
SMCO2-201ENST00000298876 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.38
SMCO2-201ENST00000298876 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
SMCO2-201ENST00000298876 KIF3BO15066 747 aa12.7□□□□□ -0.38
SMCO2-201ENST00000298876 RIMS1Q86UR5 1692 aaKnown RBP12.69□□□□□ -0.38
SMCO2-201ENST00000298876 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
SMCO2-201ENST00000298876 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
SMCO2-201ENST00000298876 FER1L4A9Z1Z3 1794 aa12.68□□□□□ -0.38
SMCO2-201ENST00000298876 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
SMCO2-201ENST00000298876 ANKRD30AQ9BXX3 1397 aa12.66□□□□□ -0.38
SMCO2-201ENST00000298876 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
SMCO2-201ENST00000298876 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms