RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
SEC61A2-201ENST00000298428 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
SEC61A2-201ENST00000298428 MYO5CQ9NQX4 1742 aa27.67■■■□□ 2.02
SEC61A2-201ENST00000298428 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
SEC61A2-201ENST00000298428 DNMT1P26358 1616 aaKnown RBP27.66■■■□□ 2.02
SEC61A2-201ENST00000298428 DAPK1P53355 1430 aa27.64■■■□□ 2.02
SEC61A2-201ENST00000298428 SETD5Q9C0A6 1442 aa27.64■■■□□ 2.02
SEC61A2-201ENST00000298428 ARHGAP5Q13017 1502 aa27.62■■■□□ 2.01
SEC61A2-201ENST00000298428 ABCC5O15440 1437 aa27.62■■■□□ 2.01
SEC61A2-201ENST00000298428 RAB3GAP2Q9H2M9 1393 aa27.61■■■□□ 2.01
SEC61A2-201ENST00000298428 PLCH2O75038 1416 aa27.59■■■□□ 2.01
SEC61A2-201ENST00000298428 HFM1A2PYH4 1435 aa27.59■■■□□ 2.01
SEC61A2-201ENST00000298428 SAMD9LQ8IVG5 1584 aa27.58■■■□□ 2.01
SEC61A2-201ENST00000298428 CHIC2Q9UKJ5 165 aa27.57■■■□□ 2
SEC61A2-201ENST00000298428 ABCA9Q8IUA7 1624 aa27.57■■■□□ 2
SEC61A2-201ENST00000298428 AKNAQ7Z591 1439 aa27.54■■■□□ 2
SEC61A2-201ENST00000298428 MAPKBP1O60336 1514 aa27.54■■■□□ 2
SEC61A2-201ENST00000298428 ARAP3Q8WWN8 1544 aa27.53■■■□□ 2
SEC61A2-201ENST00000298428 CROCC2H7BZ55 1655 aa27.53■■■□□ 2
SEC61A2-201ENST00000298428 NAIPQ13075 1403 aa27.53■■■□□ 2
SEC61A2-201ENST00000298428 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
SEC61A2-201ENST00000298428 ARHGEF5Q12774 1597 aa27.51■■□□□ 1.99
SEC61A2-201ENST00000298428 ROCK1Q13464 1354 aa27.5■■□□□ 1.99
SEC61A2-201ENST00000298428 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
SEC61A2-201ENST00000298428 RRP7BPQ9NSQ0 103 aa27.49■■□□□ 1.99
SEC61A2-201ENST00000298428 PLEKHH2Q8IVE3 1493 aa27.49■■□□□ 1.99
SEC61A2-201ENST00000298428 MBD5Q9P267 1494 aa27.49■■□□□ 1.99
SEC61A2-201ENST00000298428 GCC2Q8IWJ2 1684 aa27.49■■□□□ 1.99
SEC61A2-201ENST00000298428 HNRNPMP52272 730 aaKnown RBP eCLIP27.48■■□□□ 1.99
SEC61A2-201ENST00000298428 SYCP2Q9BX26 1530 aa27.48■■□□□ 1.99
SEC61A2-201ENST00000298428 SHANK2Q9UPX8 1470 aa27.47■■□□□ 1.99
SEC61A2-201ENST00000298428 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
SEC61A2-201ENST00000298428 KIAA1107Q9UPP5 1409 aa27.46■■□□□ 1.99
SEC61A2-201ENST00000298428 ADGBQ8N7X0 1667 aa27.45■■□□□ 1.99
SEC61A2-201ENST00000298428 CCDC141Q6ZP82 1450 aa27.45■■□□□ 1.98
SEC61A2-201ENST00000298428 ADGRL2O95490 1459 aa27.43■■□□□ 1.98
SEC61A2-201ENST00000298428 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
SEC61A2-201ENST00000298428 C9orf84Q5VXU9 1444 aa27.42■■□□□ 1.98
SEC61A2-201ENST00000298428 ABCC1P33527 1531 aa27.41■■□□□ 1.98
SEC61A2-201ENST00000298428 TSPY4P0CV99 314 aa27.41■■□□□ 1.98
SEC61A2-201ENST00000298428 TSPY10P0CW01 314 aa27.41■■□□□ 1.98
SEC61A2-201ENST00000298428 FANCAO15360 1455 aa27.41■■□□□ 1.98
SEC61A2-201ENST00000298428 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
SEC61A2-201ENST00000298428 ARHGEF12Q9NZN5 1544 aa27.39■■□□□ 1.97
SEC61A2-201ENST00000298428 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
SEC61A2-201ENST00000298428 CD109Q6YHK3 1445 aa27.38■■□□□ 1.97
SEC61A2-201ENST00000298428 KDM6BO15054 1643 aa27.34■■□□□ 1.97
SEC61A2-201ENST00000298428 CLSPNQ9HAW4 1339 aa27.33■■□□□ 1.96
SEC61A2-201ENST00000298428 MAST1Q9Y2H9 1570 aa27.32■■□□□ 1.96
SEC61A2-201ENST00000298428 GLI2P10070 1586 aa27.31■■□□□ 1.96
SEC61A2-201ENST00000298428 CFAP74Q9C0B2 1584 aa27.3■■□□□ 1.96
SEC61A2-201ENST00000298428 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
SEC61A2-201ENST00000298428 ADGRL1O94910 1474 aa27.29■■□□□ 1.96
SEC61A2-201ENST00000298428 DIP2BQ9P265 1576 aa27.28■■□□□ 1.96
SEC61A2-201ENST00000298428 MAP3K4Q9Y6R4 1608 aa27.27■■□□□ 1.96
SEC61A2-201ENST00000298428 KIF15Q9NS87 1388 aa27.26■■□□□ 1.95
SEC61A2-201ENST00000298428 SCAPERQ9BY12 1400 aa27.25■■□□□ 1.95
SEC61A2-201ENST00000298428 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
SEC61A2-201ENST00000298428 ANKRD50Q9ULJ7 1429 aa27.23■■□□□ 1.95
SEC61A2-201ENST00000298428 PLXNC1O60486 1568 aa27.22■■□□□ 1.95
SEC61A2-201ENST00000298428 FAM69CQ0P6D2 419 aa27.22■■□□□ 1.95
SEC61A2-201ENST00000298428 TRIM52Q96A61 297 aa27.21■■□□□ 1.95
SEC61A2-201ENST00000298428 AFAP1Q8N556 730 aa27.2■■□□□ 1.94
SEC61A2-201ENST00000298428 NEO1Q92859 1461 aa27.2■■□□□ 1.94
SEC61A2-201ENST00000298428 SPAG9O60271 1321 aaKnown RBP27.18■■□□□ 1.94
SEC61A2-201ENST00000298428 RTEL1-TNFRSF6BF6WH68 1400 aa27.17■■□□□ 1.94
SEC61A2-201ENST00000298428 ZFYVE16Q7Z3T8 1539 aa27.16■■□□□ 1.94
SEC61A2-201ENST00000298428 ZNF518AQ6AHZ1 1483 aa27.14■■□□□ 1.93
SEC61A2-201ENST00000298428 INO80Q9ULG1 1556 aaPredicted RBP27.12■■□□□ 1.93
SEC61A2-201ENST00000298428 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
SEC61A2-201ENST00000298428 POGZQ7Z3K3 1410 aa27.11■■□□□ 1.93
SEC61A2-201ENST00000298428 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
SEC61A2-201ENST00000298428 MPHOSPH9Q99550 1183 aa27.08■■□□□ 1.93
SEC61A2-201ENST00000298428 KIF13AQ9H1H9 1805 aa27.08■■□□□ 1.93
SEC61A2-201ENST00000298428 KDM5CP41229 1560 aa27.07■■□□□ 1.92
SEC61A2-201ENST00000298428 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
SEC61A2-201ENST00000298428 ERBINQ96RT1 1412 aa27.06■■□□□ 1.92
SEC61A2-201ENST00000298428 TSPOAP1O95153 1857 aa27.06■■□□□ 1.92
SEC61A2-201ENST00000298428 PPRC1Q5VV67 1664 aaKnown RBP27.05■■□□□ 1.92
SEC61A2-201ENST00000298428 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
SEC61A2-201ENST00000298428 PZPP20742 1482 aa27.04■■□□□ 1.92
SEC61A2-201ENST00000298428 TEX14Q8IWB6 1497 aa27.04■■□□□ 1.92
SEC61A2-201ENST00000298428 DNAJC5Q9H3Z4 198 aa27.03■■□□□ 1.92
SEC61A2-201ENST00000298428 SLC4A1APQ9BWU0 796 aaKnown RBP27.02■■□□□ 1.92
SEC61A2-201ENST00000298428 KIDINS220Q9ULH0 1771 aa27.01■■□□□ 1.91
SEC61A2-201ENST00000298428 KDM5DQ9BY66 1539 aa27.01■■□□□ 1.91
SEC61A2-201ENST00000298428 NUP155O75694 1391 aa27.01■■□□□ 1.91
SEC61A2-201ENST00000298428 MLH3Q9UHC1 1453 aa26.99■■□□□ 1.91
SEC61A2-201ENST00000298428 HECW2Q9P2P5 1572 aa26.99■■□□□ 1.91
SEC61A2-201ENST00000298428 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
SEC61A2-201ENST00000298428 UNC13BO14795 1591 aa26.98■■□□□ 1.91
SEC61A2-201ENST00000298428 RAPGEF3O95398 923 aa26.98■■□□□ 1.91
SEC61A2-201ENST00000298428 RICTORQ6R327 1708 aa26.97■■□□□ 1.91
SEC61A2-201ENST00000298428 NEUROD1Q13562 356 aa26.95■■□□□ 1.9
SEC61A2-201ENST00000298428 FOXD1Q16676 465 aa26.93■■□□□ 1.9
SEC61A2-201ENST00000298428 DHX29Q7Z478 1369 aaKnown RBP26.92■■□□□ 1.9
SEC61A2-201ENST00000298428 MAGI2Q86UL8 1455 aa26.92■■□□□ 1.9
SEC61A2-201ENST00000298428 FAM135AQ9P2D6 1515 aa26.91■■□□□ 1.9
SEC61A2-201ENST00000298428 FRMPD1Q5SYB0 1578 aa26.91■■□□□ 1.9
SEC61A2-201ENST00000298428 EIF2AK4Q9P2K8 1649 aaKnown RBP26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms