RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 MTUS2Q5JR59 1369 aa19.07■□□□□ 0.64
CDK5-201ENST00000297518 EHBP1L1Q8N3D4 1523 aa19.06■□□□□ 0.64
CDK5-201ENST00000297518 CDC42BPAQ5VT25 1732 aa19.06■□□□□ 0.64
CDK5-201ENST00000297518 TIAM1Q13009 1591 aa19.04■□□□□ 0.64
CDK5-201ENST00000297518 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
CDK5-201ENST00000297518 POGZQ7Z3K3 1410 aa19.03■□□□□ 0.64
CDK5-201ENST00000297518 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
CDK5-201ENST00000297518 ZMYM4Q5VZL5 1548 aa19.03■□□□□ 0.64
CDK5-201ENST00000297518 ARHGEF40Q8TER5 1519 aa19.01■□□□□ 0.63
CDK5-201ENST00000297518 KDM4FA0A1W2PPD8 638 aa19■□□□□ 0.63
CDK5-201ENST00000297518 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
CDK5-201ENST00000297518 ABCC1P33527 1531 aa18.99■□□□□ 0.63
CDK5-201ENST00000297518 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
CDK5-201ENST00000297518 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
CDK5-201ENST00000297518 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
CDK5-201ENST00000297518 SUPT6HQ7KZ85 1726 aaKnown RBP18.97■□□□□ 0.63
CDK5-201ENST00000297518 MAP3K1Q13233 1512 aa18.96■□□□□ 0.63
CDK5-201ENST00000297518 ZFYVE16Q7Z3T8 1539 aa18.96■□□□□ 0.63
CDK5-201ENST00000297518 ITSN2Q9NZM3 1697 aa18.96■□□□□ 0.63
CDK5-201ENST00000297518 KDM5CP41229 1560 aa18.94■□□□□ 0.62
CDK5-201ENST00000297518 SAMD9LQ8IVG5 1584 aa18.94■□□□□ 0.62
CDK5-201ENST00000297518 LRRC9Q6ZRR7 1453 aa18.94■□□□□ 0.62
CDK5-201ENST00000297518 ARHGEF12Q9NZN5 1544 aa18.93■□□□□ 0.62
CDK5-201ENST00000297518 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
CDK5-201ENST00000297518 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
CDK5-201ENST00000297518 CFDP1Q9UEE9 299 aaPredicted RBP18.92■□□□□ 0.62
CDK5-201ENST00000297518 ZNF777Q9ULD5 760 aaPredicted RBP18.91■□□□□ 0.62
CDK5-201ENST00000297518 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
CDK5-201ENST00000297518 HECW2Q9P2P5 1572 aa18.9■□□□□ 0.62
CDK5-201ENST00000297518 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
CDK5-201ENST00000297518 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
CDK5-201ENST00000297518 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
CDK5-201ENST00000297518 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
CDK5-201ENST00000297518 ATP10AO60312 1499 aa18.86■□□□□ 0.61
CDK5-201ENST00000297518 MLH3Q9UHC1 1453 aa18.86■□□□□ 0.61
CDK5-201ENST00000297518 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
CDK5-201ENST00000297518 ARID4BQ4LE39 1312 aaPredicted RBP18.86■□□□□ 0.61
CDK5-201ENST00000297518 APLP2Q06481 763 aa18.86■□□□□ 0.61
CDK5-201ENST00000297518 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
CDK5-201ENST00000297518 SIGLEC1Q9BZZ2 1709 aa18.85■□□□□ 0.61
CDK5-201ENST00000297518 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
CDK5-201ENST00000297518 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
CDK5-201ENST00000297518 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
CDK5-201ENST00000297518 ABCA6Q8N139 1617 aa18.83■□□□□ 0.61
CDK5-201ENST00000297518 HNRNPMP52272 730 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDK5-201ENST00000297518 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.6
CDK5-201ENST00000297518 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
CDK5-201ENST00000297518 ZNF644Q9H582 1327 aaPredicted RBP18.81■□□□□ 0.6
CDK5-201ENST00000297518 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
CDK5-201ENST00000297518 REREQ9P2R6 1566 aa18.8■□□□□ 0.6
CDK5-201ENST00000297518 MADDQ8WXG6 1647 aa18.79■□□□□ 0.6
CDK5-201ENST00000297518 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
CDK5-201ENST00000297518 MBD5Q9P267 1494 aa18.78■□□□□ 0.6
CDK5-201ENST00000297518 SPAG9O60271 1321 aaKnown RBP18.77■□□□□ 0.6
CDK5-201ENST00000297518 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
CDK5-201ENST00000297518 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
CDK5-201ENST00000297518 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
CDK5-201ENST00000297518 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
CDK5-201ENST00000297518 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
CDK5-201ENST00000297518 PTPRMP28827 1452 aa18.73■□□□□ 0.59
CDK5-201ENST00000297518 FER1L4A9Z1Z3 1794 aa18.73■□□□□ 0.59
CDK5-201ENST00000297518 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
CDK5-201ENST00000297518 MLECQ14165 292 aa18.72■□□□□ 0.59
CDK5-201ENST00000297518 AGLP35573 1532 aa18.72■□□□□ 0.59
CDK5-201ENST00000297518 RTEL1-TNFRSF6BF6WH68 1400 aa18.7■□□□□ 0.58
CDK5-201ENST00000297518 RSPH4AQ5TD94 716 aa18.69■□□□□ 0.58
CDK5-201ENST00000297518 ADGBQ8N7X0 1667 aa18.69■□□□□ 0.58
CDK5-201ENST00000297518 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
CDK5-201ENST00000297518 A2MP01023 1474 aa18.67■□□□□ 0.58
CDK5-201ENST00000297518 PTPN23Q9H3S7 1636 aa18.66■□□□□ 0.58
CDK5-201ENST00000297518 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
CDK5-201ENST00000297518 MAST1Q9Y2H9 1570 aa18.63■□□□□ 0.57
CDK5-201ENST00000297518 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
CDK5-201ENST00000297518 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
CDK5-201ENST00000297518 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
CDK5-201ENST00000297518 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
CDK5-201ENST00000297518 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
CDK5-201ENST00000297518 DNMT1P26358 1616 aaKnown RBP18.57■□□□□ 0.56
CDK5-201ENST00000297518 ESF1Q9H501 851 aaKnown RBP18.57■□□□□ 0.56
CDK5-201ENST00000297518 SHANK2Q9UPX8 1470 aa18.57■□□□□ 0.56
CDK5-201ENST00000297518 PLPPR3Q6T4P5 718 aa18.56■□□□□ 0.56
CDK5-201ENST00000297518 CNTLNQ9NXG0 1405 aa18.56■□□□□ 0.56
CDK5-201ENST00000297518 ABCC5O15440 1437 aa18.55■□□□□ 0.56
CDK5-201ENST00000297518 DAPK1P53355 1430 aa18.55■□□□□ 0.56
CDK5-201ENST00000297518 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
CDK5-201ENST00000297518 C3P01024 1663 aa18.54■□□□□ 0.56
CDK5-201ENST00000297518 GGT6Q6P531 493 aa18.52■□□□□ 0.56
CDK5-201ENST00000297518 CLTCQ00610 1675 aaKnown RBP18.51■□□□□ 0.55
CDK5-201ENST00000297518 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
CDK5-201ENST00000297518 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
CDK5-201ENST00000297518 KIF3BO15066 747 aa18.5■□□□□ 0.55
CDK5-201ENST00000297518 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
CDK5-201ENST00000297518 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
CDK5-201ENST00000297518 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
CDK5-201ENST00000297518 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
CDK5-201ENST00000297518 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
CDK5-201ENST00000297518 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
CDK5-201ENST00000297518 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
CDK5-201ENST00000297518 RNF17Q9BXT8 1623 aaKnown RBP18.47■□□□□ 0.55
CDK5-201ENST00000297518 FAM135AQ9P2D6 1515 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms