RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 CCER2I3L3R5 266 aa13.73□□□□□ -0.21
FYCO1-201ENST00000296137 ARGLU1Q9NWB6 273 aaPredicted RBP13.73□□□□□ -0.21
FYCO1-201ENST00000296137 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
FYCO1-201ENST00000296137 KIF16BQ96L93 1317 aa13.73□□□□□ -0.21
FYCO1-201ENST00000296137 TPM3P06753 285 aa13.73□□□□□ -0.21
FYCO1-201ENST00000296137 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
FYCO1-201ENST00000296137 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
FYCO1-201ENST00000296137 DEF6Q9H4E7 631 aa13.72□□□□□ -0.21
FYCO1-201ENST00000296137 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
FYCO1-201ENST00000296137 CCAR2Q8N163 923 aaKnown RBP13.72□□□□□ -0.21
FYCO1-201ENST00000296137 NEFHP12036 1026 aa13.72□□□□□ -0.21
FYCO1-201ENST00000296137 MEX3CQ5U5Q3 659 aaKnown RBP13.71□□□□□ -0.22
FYCO1-201ENST00000296137 ZNF592Q92610 1267 aa13.7□□□□□ -0.22
FYCO1-201ENST00000296137 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
FYCO1-201ENST00000296137 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
FYCO1-201ENST00000296137 HMMRO75330 724 aa13.69□□□□□ -0.22
FYCO1-201ENST00000296137 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
FYCO1-201ENST00000296137 ACBD3Q9H3P7 528 aa13.69□□□□□ -0.22
FYCO1-201ENST00000296137 AK7Q96M32 723 aa13.69□□□□□ -0.22
FYCO1-201ENST00000296137 SCRIBQ14160 1630 aa13.69□□□□□ -0.22
FYCO1-201ENST00000296137 EEA1Q15075 1411 aa13.68□□□□□ -0.22
FYCO1-201ENST00000296137 TSPYL1Q9H0U9 437 aa13.68□□□□□ -0.22
FYCO1-201ENST00000296137 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
FYCO1-201ENST00000296137 HSP90B2PQ58FF3 399 aa13.67□□□□□ -0.22
FYCO1-201ENST00000296137 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
FYCO1-201ENST00000296137 ARID3CA6NKF2 412 aa13.67□□□□□ -0.22
FYCO1-201ENST00000296137 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
FYCO1-201ENST00000296137 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
FYCO1-201ENST00000296137 DYDC1Q8WWB3 177 aa13.66□□□□□ -0.22
FYCO1-201ENST00000296137 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
FYCO1-201ENST00000296137 USP8P40818 1118 aa13.65□□□□□ -0.22
FYCO1-201ENST00000296137 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
FYCO1-201ENST00000296137 CCDC34Q96HJ3 373 aa13.65□□□□□ -0.22
FYCO1-201ENST00000296137 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
FYCO1-201ENST00000296137 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
FYCO1-201ENST00000296137 RUFY1Q96T51 708 aa13.64□□□□□ -0.23
FYCO1-201ENST00000296137 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
FYCO1-201ENST00000296137 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
FYCO1-201ENST00000296137 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
FYCO1-201ENST00000296137 KIAA1211Q6ZU35 1233 aa13.62□□□□□ -0.23
FYCO1-201ENST00000296137 ZMYND15Q9H091 742 aa13.62□□□□□ -0.23
FYCO1-201ENST00000296137 HMGN5P82970 282 aaKnown RBP13.62□□□□□ -0.23
FYCO1-201ENST00000296137 AEBP1Q8IUX7 1158 aa13.62□□□□□ -0.23
FYCO1-201ENST00000296137 P3H3Q8IVL6 736 aa13.61□□□□□ -0.23
FYCO1-201ENST00000296137 CDR1P51861 262 aa13.61□□□□□ -0.23
FYCO1-201ENST00000296137 CCDC39Q9UFE4 941 aa13.61□□□□□ -0.23
FYCO1-201ENST00000296137 MYO15BQ96JP2 1530 aa13.61□□□□□ -0.23
FYCO1-201ENST00000296137 RBM10P98175 930 aaKnown RBP13.61□□□□□ -0.23
FYCO1-201ENST00000296137 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
FYCO1-201ENST00000296137 BRPF3Q9ULD4 1205 aa13.6□□□□□ -0.23
FYCO1-201ENST00000296137 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
FYCO1-201ENST00000296137 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
FYCO1-201ENST00000296137 OS9Q13438 667 aaPredicted RBP13.6□□□□□ -0.23
FYCO1-201ENST00000296137 ST18O60284 1047 aa13.6□□□□□ -0.23
FYCO1-201ENST00000296137 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
FYCO1-201ENST00000296137 NASPP49321 788 aaPredicted RBP13.59□□□□□ -0.23
FYCO1-201ENST00000296137 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
FYCO1-201ENST00000296137 CLSTN1O94985 981 aa13.59□□□□□ -0.23
FYCO1-201ENST00000296137 MRE11P49959 708 aa13.59□□□□□ -0.23
FYCO1-201ENST00000296137 HOMER1Q86YM7 354 aa13.58□□□□□ -0.23
FYCO1-201ENST00000296137 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
FYCO1-201ENST00000296137 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
FYCO1-201ENST00000296137 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
FYCO1-201ENST00000296137 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
FYCO1-201ENST00000296137 PMFBP1Q8TBY8 1022 aa13.57□□□□□ -0.24
FYCO1-201ENST00000296137 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
FYCO1-201ENST00000296137 IRX3P78415 501 aaPredicted RBP13.57□□□□□ -0.24
FYCO1-201ENST00000296137 TPM1P09493 284 aa13.56□□□□□ -0.24
FYCO1-201ENST00000296137 RWDD1Q9H446 243 aaPredicted RBP13.56□□□□□ -0.24
FYCO1-201ENST00000296137 GIMAP7Q8NHV1 300 aa13.56□□□□□ -0.24
FYCO1-201ENST00000296137 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
FYCO1-201ENST00000296137 IFT57Q9NWB7 429 aa13.55□□□□□ -0.24
FYCO1-201ENST00000296137 ATP6V1DQ9Y5K8 247 aa13.55□□□□□ -0.24
FYCO1-201ENST00000296137 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
FYCO1-201ENST00000296137 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
FYCO1-201ENST00000296137 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
FYCO1-201ENST00000296137 PDIA4P13667 645 aaKnown RBP13.54□□□□□ -0.24
FYCO1-201ENST00000296137 MNS1Q8NEH6 495 aa13.54□□□□□ -0.24
FYCO1-201ENST00000296137 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
FYCO1-201ENST00000296137 PDE4AP27815 886 aa13.54□□□□□ -0.24
FYCO1-201ENST00000296137 BECN2A8MW95 431 aa13.54□□□□□ -0.24
FYCO1-201ENST00000296137 NFKBIBQ15653 356 aa13.54□□□□□ -0.24
FYCO1-201ENST00000296137 MTUS2Q5JR59 1369 aa13.53□□□□□ -0.24
FYCO1-201ENST00000296137 KIAA0754O94854 1291 aa13.53□□□□□ -0.24
FYCO1-201ENST00000296137 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
FYCO1-201ENST00000296137 PDCL3Q9H2J4 239 aa13.53□□□□□ -0.24
FYCO1-201ENST00000296137 ERCC4Q92889 916 aaPredicted RBP13.53□□□□□ -0.24
FYCO1-201ENST00000296137 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.24
FYCO1-201ENST00000296137 UQCRHP07919 91 aa13.52□□□□□ -0.24
FYCO1-201ENST00000296137 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
FYCO1-201ENST00000296137 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
FYCO1-201ENST00000296137 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
FYCO1-201ENST00000296137 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
FYCO1-201ENST00000296137 NEUROD2Q15784 382 aa13.52□□□□□ -0.25
FYCO1-201ENST00000296137 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
FYCO1-201ENST00000296137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.255e-6■□□□□ 11.1
FYCO1-201ENST00000296137 CCDC173Q0VFZ6 552 aa13.5□□□□□ -0.25
FYCO1-201ENST00000296137 NPHP1O15259 732 aa13.5□□□□□ -0.25
FYCO1-201ENST00000296137 CALCOCO1Q9P1Z2 691 aa13.5□□□□□ -0.25
FYCO1-201ENST00000296137 CREBRFQ8IUR6 639 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms