RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 POGZQ7Z3K3 1410 aa16.91■□□□□ 0.3
SNF8-201ENST00000290330 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
SNF8-201ENST00000290330 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
SNF8-201ENST00000290330 YEATS2Q9ULM3 1422 aa16.89■□□□□ 0.29
SNF8-201ENST00000290330 MAGI2Q86UL8 1455 aa16.89■□□□□ 0.29
SNF8-201ENST00000290330 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
SNF8-201ENST00000290330 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
SNF8-201ENST00000290330 ZFYVE16Q7Z3T8 1539 aa16.87■□□□□ 0.29
SNF8-201ENST00000290330 AFAP1Q8N556 730 aa16.85■□□□□ 0.29
SNF8-201ENST00000290330 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
SNF8-201ENST00000290330 PTPRMP28827 1452 aa16.85■□□□□ 0.29
SNF8-201ENST00000290330 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
SNF8-201ENST00000290330 ZNF518AQ6AHZ1 1483 aa16.83■□□□□ 0.28
SNF8-201ENST00000290330 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
SNF8-201ENST00000290330 HECW2Q9P2P5 1572 aa16.82■□□□□ 0.28
SNF8-201ENST00000290330 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
SNF8-201ENST00000290330 ATP10AO60312 1499 aa16.8■□□□□ 0.28
SNF8-201ENST00000290330 MADDQ8WXG6 1647 aa16.8■□□□□ 0.28
SNF8-201ENST00000290330 KDM5CP41229 1560 aa16.8■□□□□ 0.28
SNF8-201ENST00000290330 SIGLEC1Q9BZZ2 1709 aa16.79■□□□□ 0.28
SNF8-201ENST00000290330 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
SNF8-201ENST00000290330 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
SNF8-201ENST00000290330 C9orf84Q5VXU9 1444 aa16.78■□□□□ 0.28
SNF8-201ENST00000290330 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
SNF8-201ENST00000290330 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
SNF8-201ENST00000290330 ABCC1P33527 1531 aa16.77■□□□□ 0.28
SNF8-201ENST00000290330 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
SNF8-201ENST00000290330 MLECQ14165 292 aa16.77■□□□□ 0.28
SNF8-201ENST00000290330 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
SNF8-201ENST00000290330 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
SNF8-201ENST00000290330 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
SNF8-201ENST00000290330 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
SNF8-201ENST00000290330 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
SNF8-201ENST00000290330 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
SNF8-201ENST00000290330 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
SNF8-201ENST00000290330 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
SNF8-201ENST00000290330 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
SNF8-201ENST00000290330 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
SNF8-201ENST00000290330 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNF8-201ENST00000290330 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
SNF8-201ENST00000290330 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
SNF8-201ENST00000290330 SYCP2Q9BX26 1530 aa16.69■□□□□ 0.26
SNF8-201ENST00000290330 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
SNF8-201ENST00000290330 REREQ9P2R6 1566 aa16.68■□□□□ 0.26
SNF8-201ENST00000290330 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
SNF8-201ENST00000290330 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
SNF8-201ENST00000290330 LMTK3Q96Q04 1460 aa16.67■□□□□ 0.26
SNF8-201ENST00000290330 VPS8Q8N3P4 1428 aa16.66■□□□□ 0.26
SNF8-201ENST00000290330 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
SNF8-201ENST00000290330 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
SNF8-201ENST00000290330 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
SNF8-201ENST00000290330 TIAM1Q13009 1591 aa16.65■□□□□ 0.26
SNF8-201ENST00000290330 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
SNF8-201ENST00000290330 AGLP35573 1532 aa16.65■□□□□ 0.26
SNF8-201ENST00000290330 CEBPAP49715 358 aaPredicted RBP16.63■□□□□ 0.25
SNF8-201ENST00000290330 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
SNF8-201ENST00000290330 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
SNF8-201ENST00000290330 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
SNF8-201ENST00000290330 HSPA2P54652 639 aa16.59■□□□□ 0.25
SNF8-201ENST00000290330 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
SNF8-201ENST00000290330 INO80Q9ULG1 1556 aaPredicted RBP16.58■□□□□ 0.24
SNF8-201ENST00000290330 SUPT6HQ7KZ85 1726 aaKnown RBP16.58■□□□□ 0.24
SNF8-201ENST00000290330 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
SNF8-201ENST00000290330 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
SNF8-201ENST00000290330 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
SNF8-201ENST00000290330 A2MP01023 1474 aa16.55■□□□□ 0.24
SNF8-201ENST00000290330 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
SNF8-201ENST00000290330 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
SNF8-201ENST00000290330 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
SNF8-201ENST00000290330 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
SNF8-201ENST00000290330 PLXNC1O60486 1568 aa16.53■□□□□ 0.24
SNF8-201ENST00000290330 CAMSAP2Q08AD1 1489 aa16.53■□□□□ 0.24
SNF8-201ENST00000290330 CCDC141Q6ZP82 1450 aa16.51■□□□□ 0.23
SNF8-201ENST00000290330 GGT6Q6P531 493 aa16.5■□□□□ 0.23
SNF8-201ENST00000290330 C3P01024 1663 aa16.5■□□□□ 0.23
SNF8-201ENST00000290330 PREX1Q8TCU6 1659 aa16.5■□□□□ 0.23
SNF8-201ENST00000290330 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
SNF8-201ENST00000290330 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
SNF8-201ENST00000290330 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
SNF8-201ENST00000290330 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
SNF8-201ENST00000290330 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
SNF8-201ENST00000290330 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
SNF8-201ENST00000290330 TSPY4P0CV99 314 aa16.46■□□□□ 0.23
SNF8-201ENST00000290330 TSPY10P0CW01 314 aa16.46■□□□□ 0.23
SNF8-201ENST00000290330 APLP2Q06481 763 aa16.46■□□□□ 0.23
SNF8-201ENST00000290330 ARHGEF5Q12774 1597 aa16.46■□□□□ 0.23
SNF8-201ENST00000290330 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
SNF8-201ENST00000290330 NPATQ14207 1427 aa16.45■□□□□ 0.22
SNF8-201ENST00000290330 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
SNF8-201ENST00000290330 MROH2AA6NES4 1674 aa16.44■□□□□ 0.22
SNF8-201ENST00000290330 KIF3BO15066 747 aa16.43■□□□□ 0.22
SNF8-201ENST00000290330 CLTCQ00610 1675 aaKnown RBP16.41■□□□□ 0.22
SNF8-201ENST00000290330 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
SNF8-201ENST00000290330 FBXO41Q8TF61 875 aa16.39■□□□□ 0.21
SNF8-201ENST00000290330 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
SNF8-201ENST00000290330 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
SNF8-201ENST00000290330 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
SNF8-201ENST00000290330 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
SNF8-201ENST00000290330 PTPRTO14522 1441 aa16.33■□□□□ 0.2
SNF8-201ENST00000290330 ABCC5O15440 1437 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms