RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 MYO5CQ9NQX4 1742 aa17.29■□□□□ 0.36
CHRNB3-201ENST00000289957 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
CHRNB3-201ENST00000289957 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
CHRNB3-201ENST00000289957 ITSN2Q9NZM3 1697 aa17.28■□□□□ 0.36
CHRNB3-201ENST00000289957 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
CHRNB3-201ENST00000289957 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
CHRNB3-201ENST00000289957 SAMD9LQ8IVG5 1584 aa17.27■□□□□ 0.35
CHRNB3-201ENST00000289957 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
CHRNB3-201ENST00000289957 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHRNB3-201ENST00000289957 CHIC2Q9UKJ5 165 aa17.26■□□□□ 0.35
CHRNB3-201ENST00000289957 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
CHRNB3-201ENST00000289957 PLCH2O75038 1416 aa17.26■□□□□ 0.35
CHRNB3-201ENST00000289957 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
CHRNB3-201ENST00000289957 CD109Q6YHK3 1445 aa17.23■□□□□ 0.35
CHRNB3-201ENST00000289957 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
CHRNB3-201ENST00000289957 TSPOAP1O95153 1857 aa17.22■□□□□ 0.35
CHRNB3-201ENST00000289957 SYCP2Q9BX26 1530 aa17.22■□□□□ 0.35
CHRNB3-201ENST00000289957 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
CHRNB3-201ENST00000289957 FANCAO15360 1455 aa17.2■□□□□ 0.34
CHRNB3-201ENST00000289957 ABCC5O15440 1437 aa17.2■□□□□ 0.34
CHRNB3-201ENST00000289957 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
CHRNB3-201ENST00000289957 DAPK1P53355 1430 aa17.18■□□□□ 0.34
CHRNB3-201ENST00000289957 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
CHRNB3-201ENST00000289957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHRNB3-201ENST00000289957 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
CHRNB3-201ENST00000289957 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
CHRNB3-201ENST00000289957 DNMT1P26358 1616 aaKnown RBP17.16■□□□□ 0.34
CHRNB3-201ENST00000289957 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
CHRNB3-201ENST00000289957 GLI2P10070 1586 aa17.15■□□□□ 0.34
CHRNB3-201ENST00000289957 PPRC1Q5VV67 1664 aaKnown RBP17.15■□□□□ 0.34
CHRNB3-201ENST00000289957 AFAP1Q8N556 730 aa17.15■□□□□ 0.34
CHRNB3-201ENST00000289957 ABCC1P33527 1531 aa17.14■□□□□ 0.34
CHRNB3-201ENST00000289957 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
CHRNB3-201ENST00000289957 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
CHRNB3-201ENST00000289957 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
CHRNB3-201ENST00000289957 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
CHRNB3-201ENST00000289957 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
CHRNB3-201ENST00000289957 CROCC2H7BZ55 1655 aa17.11■□□□□ 0.33
CHRNB3-201ENST00000289957 RAPGEF3O95398 923 aa17.1■□□□□ 0.33
CHRNB3-201ENST00000289957 KDM6BO15054 1643 aa17.1■□□□□ 0.33
CHRNB3-201ENST00000289957 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.33
CHRNB3-201ENST00000289957 C9orf84Q5VXU9 1444 aa17.08■□□□□ 0.32
CHRNB3-201ENST00000289957 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
CHRNB3-201ENST00000289957 ARHGEF5Q12774 1597 aa17.07■□□□□ 0.32
CHRNB3-201ENST00000289957 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
CHRNB3-201ENST00000289957 NAIPQ13075 1403 aa17.07■□□□□ 0.32
CHRNB3-201ENST00000289957 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
CHRNB3-201ENST00000289957 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
CHRNB3-201ENST00000289957 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
CHRNB3-201ENST00000289957 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
CHRNB3-201ENST00000289957 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
CHRNB3-201ENST00000289957 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
CHRNB3-201ENST00000289957 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
CHRNB3-201ENST00000289957 NEO1Q92859 1461 aa17.02■□□□□ 0.31
CHRNB3-201ENST00000289957 POGZQ7Z3K3 1410 aa17.01■□□□□ 0.31
CHRNB3-201ENST00000289957 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
CHRNB3-201ENST00000289957 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
CHRNB3-201ENST00000289957 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
CHRNB3-201ENST00000289957 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
CHRNB3-201ENST00000289957 FRMPD1Q5SYB0 1578 aa17■□□□□ 0.31
CHRNB3-201ENST00000289957 ZFYVE16Q7Z3T8 1539 aa16.99■□□□□ 0.31
CHRNB3-201ENST00000289957 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
CHRNB3-201ENST00000289957 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
CHRNB3-201ENST00000289957 ROCK1Q13464 1354 aa16.98■□□□□ 0.31
CHRNB3-201ENST00000289957 KIF15Q9NS87 1388 aa16.98■□□□□ 0.31
CHRNB3-201ENST00000289957 GCC2Q8IWJ2 1684 aa16.98■□□□□ 0.31
CHRNB3-201ENST00000289957 RICTORQ6R327 1708 aa16.98■□□□□ 0.31
CHRNB3-201ENST00000289957 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
CHRNB3-201ENST00000289957 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
CHRNB3-201ENST00000289957 ZNF518AQ6AHZ1 1483 aa16.97■□□□□ 0.31
CHRNB3-201ENST00000289957 KIDINS220Q9ULH0 1771 aa16.96■□□□□ 0.31
CHRNB3-201ENST00000289957 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
CHRNB3-201ENST00000289957 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
CHRNB3-201ENST00000289957 TEX14Q8IWB6 1497 aa16.96■□□□□ 0.3
CHRNB3-201ENST00000289957 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
CHRNB3-201ENST00000289957 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
CHRNB3-201ENST00000289957 KDM5CP41229 1560 aa16.95■□□□□ 0.3
CHRNB3-201ENST00000289957 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
CHRNB3-201ENST00000289957 YEATS2Q9ULM3 1422 aa16.94■□□□□ 0.3
CHRNB3-201ENST00000289957 ANKRD50Q9ULJ7 1429 aa16.93■□□□□ 0.3
CHRNB3-201ENST00000289957 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
CHRNB3-201ENST00000289957 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
CHRNB3-201ENST00000289957 ABCA6Q8N139 1617 aa16.91■□□□□ 0.3
CHRNB3-201ENST00000289957 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
CHRNB3-201ENST00000289957 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
CHRNB3-201ENST00000289957 RTEL1-TNFRSF6BF6WH68 1400 aa16.88■□□□□ 0.29
CHRNB3-201ENST00000289957 FOXD1Q16676 465 aa16.87■□□□□ 0.29
CHRNB3-201ENST00000289957 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
CHRNB3-201ENST00000289957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHRNB3-201ENST00000289957 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
CHRNB3-201ENST00000289957 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
CHRNB3-201ENST00000289957 DUOX2Q9NRD8 1548 aa16.84■□□□□ 0.29
CHRNB3-201ENST00000289957 ZMYM4Q5VZL5 1548 aa16.83■□□□□ 0.28
CHRNB3-201ENST00000289957 KIF3BO15066 747 aa16.82■□□□□ 0.28
CHRNB3-201ENST00000289957 A2MP01023 1474 aa16.82■□□□□ 0.28
CHRNB3-201ENST00000289957 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
CHRNB3-201ENST00000289957 PZPP20742 1482 aa16.81■□□□□ 0.28
CHRNB3-201ENST00000289957 NUP155O75694 1391 aa16.8■□□□□ 0.28
CHRNB3-201ENST00000289957 ERBINQ96RT1 1412 aa16.8■□□□□ 0.28
CHRNB3-201ENST00000289957 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms