RNA–Protein interactions for RNA: ENST00000285238.12

ABCC3-201, Transcript of ATP binding cassette subfamily C member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC3, Length 5,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-201ENST00000285238 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
ABCC3-201ENST00000285238 RTN4Q9NQC3 1192 aaKnown RBP16.15■□□□□ 0.18
ABCC3-201ENST00000285238 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
ABCC3-201ENST00000285238 DNTTIP2Q5QJE6 756 aaKnown RBP16.14■□□□□ 0.17
ABCC3-201ENST00000285238 STK26Q9P289 416 aa16.13■□□□□ 0.17
ABCC3-201ENST00000285238 NUP155O75694 1391 aa16.13■□□□□ 0.17
ABCC3-201ENST00000285238 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
ABCC3-201ENST00000285238 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
ABCC3-201ENST00000285238 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
ABCC3-201ENST00000285238 TAOK2Q9UL54 1235 aa16.11■□□□□ 0.17
ABCC3-201ENST00000285238 KCNJ4P48050 445 aa16.11■□□□□ 0.17
ABCC3-201ENST00000285238 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
ABCC3-201ENST00000285238 FGD1P98174 961 aa16.1■□□□□ 0.17
ABCC3-201ENST00000285238 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
ABCC3-201ENST00000285238 RCAN3Q9UKA8 241 aa16.1■□□□□ 0.17
ABCC3-201ENST00000285238 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
ABCC3-201ENST00000285238 SMARCA2P51531 1590 aa16.08■□□□□ 0.16
ABCC3-201ENST00000285238 RALBP1Q15311 655 aa16.08■□□□□ 0.16
ABCC3-201ENST00000285238 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
ABCC3-201ENST00000285238 L3MBTL2Q969R5 705 aa16.08■□□□□ 0.16
ABCC3-201ENST00000285238 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
ABCC3-201ENST00000285238 NAP1L5Q96NT1 182 aaPredicted RBP16.07■□□□□ 0.16
ABCC3-201ENST00000285238 U2AF1L5P0DN76 240 aaPredicted RBP16.06■□□□□ 0.16
ABCC3-201ENST00000285238 U2AF1Q01081 240 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■■□□ 17.5
ABCC3-201ENST00000285238 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
ABCC3-201ENST00000285238 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
ABCC3-201ENST00000285238 NAP1L2Q9ULW6 460 aaPredicted RBP16.05■□□□□ 0.16
ABCC3-201ENST00000285238 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
ABCC3-201ENST00000285238 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
ABCC3-201ENST00000285238 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
ABCC3-201ENST00000285238 WIZO95785 1651 aa16.03■□□□□ 0.16
ABCC3-201ENST00000285238 APBB1O00213 710 aa16.03■□□□□ 0.16
ABCC3-201ENST00000285238 IPO8O15397 1037 aaKnown RBP16.02■□□□□ 0.16
ABCC3-201ENST00000285238 HNRNPMP52272 730 aaKnown RBP eCLIP16.01■□□□□ 0.15
ABCC3-201ENST00000285238 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
ABCC3-201ENST00000285238 NPHP1O15259 732 aa16.01■□□□□ 0.15
ABCC3-201ENST00000285238 DEKP35659 375 aaKnown RBP16.01■□□□□ 0.15
ABCC3-201ENST00000285238 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
ABCC3-201ENST00000285238 MCCP23508 829 aa15.99■□□□□ 0.15
ABCC3-201ENST00000285238 KIF3BO15066 747 aa15.99■□□□□ 0.15
ABCC3-201ENST00000285238 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
ABCC3-201ENST00000285238 GOLGA6L4A6NEF3 574 aa15.99■□□□□ 0.15
ABCC3-201ENST00000285238 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
ABCC3-201ENST00000285238 TULP1O00294 542 aaPredicted RBP15.97■□□□□ 0.15
ABCC3-201ENST00000285238 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
ABCC3-201ENST00000285238 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
ABCC3-201ENST00000285238 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
ABCC3-201ENST00000285238 NLRP13Q86W25 1043 aa15.95■□□□□ 0.14
ABCC3-201ENST00000285238 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
ABCC3-201ENST00000285238 CFAP44Q96MT7 982 aa15.95■□□□□ 0.14
ABCC3-201ENST00000285238 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
ABCC3-201ENST00000285238 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
ABCC3-201ENST00000285238 L1TD1Q5T7N2 865 aaKnown RBP15.94■□□□□ 0.14
ABCC3-201ENST00000285238 EIF3AQ14152 1382 aaKnown RBP15.94■□□□□ 0.14
ABCC3-201ENST00000285238 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
ABCC3-201ENST00000285238 SLKQ9H2G2 1235 aaPredicted RBP15.93■□□□□ 0.14
ABCC3-201ENST00000285238 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
ABCC3-201ENST00000285238 DHX57Q6P158 1386 aaKnown RBP15.93■□□□□ 0.14
ABCC3-201ENST00000285238 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
ABCC3-201ENST00000285238 SMC4Q9NTJ3 1288 aa15.91■□□□□ 0.14
ABCC3-201ENST00000285238 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
ABCC3-201ENST00000285238 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
ABCC3-201ENST00000285238 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
ABCC3-201ENST00000285238 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
ABCC3-201ENST00000285238 RUSC2Q8N2Y8 1516 aa15.9■□□□□ 0.14
ABCC3-201ENST00000285238 KIAA1211Q6ZU35 1233 aa15.9■□□□□ 0.14
ABCC3-201ENST00000285238 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
ABCC3-201ENST00000285238 NRDCO43847 1150 aa15.89■□□□□ 0.14
ABCC3-201ENST00000285238 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
ABCC3-201ENST00000285238 TERF2IPQ9NYB0 399 aa15.89■□□□□ 0.13
ABCC3-201ENST00000285238 ST20-MTHFSA0A0A6YYL1 179 aa15.89■□□□□ 0.13
ABCC3-201ENST00000285238 PDE3BQ13370 1112 aa15.88■□□□□ 0.13
ABCC3-201ENST00000285238 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
ABCC3-201ENST00000285238 GZF1Q9H116 711 aaPredicted RBP15.87■□□□□ 0.13
ABCC3-201ENST00000285238 MFAP1P55081 439 aaKnown RBP15.87■□□□□ 0.13
ABCC3-201ENST00000285238 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
ABCC3-201ENST00000285238 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
ABCC3-201ENST00000285238 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
ABCC3-201ENST00000285238 WASHC2CQ9Y4E1 1318 aa15.86■□□□□ 0.13
ABCC3-201ENST00000285238 STK31Q9BXU1 1019 aa15.85■□□□□ 0.13
ABCC3-201ENST00000285238 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
ABCC3-201ENST00000285238 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
ABCC3-201ENST00000285238 CSB-PGBD3P0DP91 1061 aa15.84■□□□□ 0.13
ABCC3-201ENST00000285238 IPO9Q96P70 1041 aaKnown RBP15.84■□□□□ 0.13
ABCC3-201ENST00000285238 MYBBP1AQ9BQG0 1328 aaKnown RBP15.84■□□□□ 0.13
ABCC3-201ENST00000285238 PANK3Q9H999 370 aa15.84■□□□□ 0.13
ABCC3-201ENST00000285238 DRC7Q8IY82 874 aa15.83■□□□□ 0.13
ABCC3-201ENST00000285238 ZNF330Q9Y3S2 320 aaPredicted RBP15.83■□□□□ 0.13
ABCC3-201ENST00000285238 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
ABCC3-201ENST00000285238 CHAF1AQ13111 956 aaPredicted RBP15.83■□□□□ 0.12
ABCC3-201ENST00000285238 PHLDB1Q86UU1 1377 aa15.82■□□□□ 0.12
ABCC3-201ENST00000285238 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
ABCC3-201ENST00000285238 PRKRIP1Q9H875 184 aaPredicted RBP15.81■□□□□ 0.12
ABCC3-201ENST00000285238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.81■□□□□ 0.12
ABCC3-201ENST00000285238 CCDC144AA2RUR9 1427 aa15.81■□□□□ 0.12
ABCC3-201ENST00000285238 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
ABCC3-201ENST00000285238 GNL2Q13823 731 aaKnown RBP15.79■□□□□ 0.12
ABCC3-201ENST00000285238 HMMRO75330 724 aa15.79■□□□□ 0.12
ABCC3-201ENST00000285238 TRIM6-TRIM34B2RNG4 842 aa15.79■□□□□ 0.12
ABCC3-201ENST00000285238 NUTM2FA1L443 756 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms